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Dobson, Kerri L; Jury, Christopher P; Toonen, Robert J; McLachlan, Rowan H; Williams, Jeremy C; Grottoli, Andréa G (2024): Seawater carbonate chemistry and Montipora capitata and Porites compressa physiological measurements for experimental corals and parent colonies from 2014-2015 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.972995

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Published: 2024-10-11 • DOI registered: 2024-11-09

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Abstract:
Following natural thermal stress in two consecutive years (2014 and 2015), we evaluated the effects of feeding and simulated ocean acidification on the physiological recovery of Montipora capitata and Porites compressa sourced from Kāne'ohe Bay and Waimānalo Bay, Hawai'i.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from BCO-DMO (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-10-10.
Keyword(s):
Animalia; Behaviour; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Calcification/Dissolution; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Laboratory experiment; Montipora capitata; North Pacific; Other; Other studied parameter or process; Porites compressa; Primary production/Photosynthesis; Respiration; Single species; Tropical
Related to:
Dobson, Kerri L; Jury, Christopher P; Toonen, Robert J; McLachlan, Rowan H; Williams, Jeremy C; Grottoli, Andréa G (2024): Ocean acidification does not prolong recovery of coral holobionts from natural thermal stress in two consecutive years. Communications Earth & Environment, 5(1), 515, https://doi.org/10.1038/s43247-024-01672-5
Source:
Grottoli, Andréa G; Toonen, Robert J; Dobson, Kerri L; Jury, Christopher P (2024): Montipora capitata and Porites compressa Physiological Measurements for Experimental Corals and Parent Colonies from 2014-2015 (RAPID Hawaii project) [dataset]. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://doi.org/10.26008/1912/BCO-DMO.914498.1
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Further details:
Experimental tank parameters
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Coverage:
Median Latitude: 21.388455 * Median Longitude: -157.741554 * South-bound Latitude: 21.326667 * West-bound Longitude: -157.786667 * North-bound Latitude: 21.435000 * East-bound Longitude: -157.681667
Date/Time Start: 2014-11-01T00:00:00 * Date/Time End: 2015-12-31T00:00:00
Event(s):
K_ne_ohe_Bay * Latitude: 21.435000 * Longitude: -157.786667 * Date/Time Start: 2014-11-01T00:00:00 * Date/Time End: 2015-12-31T00:00:00
Waim_nalo_Bay * Latitude: 21.326667 * Longitude: -157.681667 * Date/Time Start: 2014-11-01T00:00:00 * Date/Time End: 2015-12-31T00:00:00
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventDobson, Kerri L
2Type of studyStudy typeDobson, Kerri L
3Species, unique identificationSpecies UIDDobson, Kerri L
4Species, unique identification (URI)Species UID (URI)Dobson, Kerri L
5Species, unique identification (Semantic URI)Species UID (Semantic URI)Dobson, Kerri L
6LATITUDELatitudeDobson, Kerri LGeocode
7LONGITUDELongitudeDobson, Kerri LGeocode
8Colony number/IDColony no/IDDobson, Kerri L
9Sample IDSample IDDobson, Kerri L
10Health statusHealth statusDobson, Kerri Lparent colony. NB = non-bleached; B = bleached.
11TreatmentTreatDobson, Kerri LpH
12TreatmentTreatDobson, Kerri LFeeding status of experimental tank
13TreatmentTreatDobson, Kerri L
14SpeciesSpeciesDobson, Kerri Ltank
15Time point, descriptiveTime pointDobson, Kerri LCollection time for Parent colony and time of removal from experiment for those in treatment
16Cell densityCells#/cm2Dobson, Kerri LEndosymbiont
17Calcification rateCalc ratemg/cm2/dayDobson, Kerri L
18BiomassBiommg/cm2Dobson, Kerri Ltotal
19LipidsLipidmJ/mgDobson, Kerri Ltotal
20Gross photosynthesis rate, oxygenPG O2µmol/min/cm2Dobson, Kerri L
21Light enhanced dark respirationLEDRarbitrary unitsDobson, Kerri L
22RespirationResp%Dobson, Kerri LContribution (percentage) of Zooxanthellae (Symbiodiniaceae)
23Feeding rateFeed rate#/cm2/hDobson, Kerri LBrine shrimp
24RespirationResp%Dobson, Kerri LContribution (percentage) of heterotrophy
25RespirationResp%Dobson, Kerri LContribution (percentage) of total fixed carbon
26SalinitySalDobson, Kerri L
27Temperature, waterTemp°CDobson, Kerri Lex_situ
28Temperature, waterTemp°CDobson, Kerri Lin_situ
29pH, total scalepHTDobson, Kerri LSpectrophotometricex_situ, total scale
30Alkalinity, totalATµmol/kgDobson, Kerri LPotentiometric titration
31pH, total scalepHTDobson, Kerri LCalculated using CO2SYSin_situ, total scale
32Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmDobson, Kerri LCalculated using CO2SYSin_situ
33Bicarbonate ion[HCO3]-µmol/kgDobson, Kerri LCalculated using CO2SYSin_situ
34Carbonate ion[CO3]2-µmol/kgDobson, Kerri LCalculated using CO2SYSin_situ
35Aragonite saturation stateOmega ArgDobson, Kerri LCalculated using CO2SYSin_situ
36Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
38Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
17400 data points

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