Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Jury, Christopher P; Toonen, Robert J (2024): Seawater carbonate chemistry and calcification data for widespread scope for coral adaptation under combined ocean warming and acidification [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.973022

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX Citation

Abstract:
Here, we take advantage of the ability to sample genetically distinct coral colonies (genets) to produce genetically identical clonal fragments (ramets) and use an identical twin design to estimate the broad sense heritability (H2) and potential for adaptation of coral calcification rates under warming, acidification and the combination of both factors. Corals of eight species were exposed to one of four treatments: (i) control (present-day temperature and pH), (ii) ocean warming (+2°C and present-day pH), (iii) ocean acidification (present-day temperature and −0.2 pH units), or (iv) combined future ocean (+2°C and −0.2 pH units). This study was conducted over 1 year, providing the corals with time to acclimatize to the treatments and helping to ensure that the measured calcification responses were a result of heritable variation among them rather than differences in their short-term histories.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Dryad (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-10-15.
Keyword(s):
Animalia; Benthic animals; Benthos; Calcification/Dissolution; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Laboratory experiment; Montipora capitata; Montipora flabellata; Montipora patula; North Pacific; Pocillopora acuta; Pocillopora meandrina; Porites compressa; Porites evermanni; Porites lobata; Single species; Temperature; Tropical
Related to:
Jury, Christopher P; Toonen, Robert J (2024): Widespread scope for coral adaptation under combined ocean warming and acidification. Proceedings of the Royal Society B-Biological Sciences, 291(2031), 20241161, https://doi.org/10.1098/rspb.2024.1161
Source:
Jury, Christopher P; Toonen, Robert J (2024): Environmental and calcification data for widespread scope for coral adaptation under combined ocean warming and acidification [dataset]. Dryad, https://doi.org/10.5061/DRYAD.KWH70RZDC
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Further details:
Environmental and carbonate chemistry data from the mesocosms
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeJury, Christopher P
2IdentificationIDJury, Christopher PTank
3IdentificationIDJury, Christopher PHeader
4TreatmentTreatJury, Christopher P
5Species, unique identificationSpecies UIDJury, Christopher P
6Species, unique identification (URI)Species UID (URI)Jury, Christopher P
7Species, unique identification (Semantic URI)Species UID (Semantic URI)Jury, Christopher P
8SiteSiteJury, Christopher P
9NumberNoJury, Christopher PColony
10NumberNoJury, Christopher PNubbin
11IdentificationIDJury, Christopher PColony
12Calcification rate of calcium carbonateCalc rate CaCO3mg/g/dayJury, Christopher P
13SalinitySalJury, Christopher P
14Temperature, waterTemp°CJury, Christopher P
15Alkalinity, totalATµmol/kgJury, Christopher P
16pH, total scalepHTJury, Christopher Ptotal scale
17Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
18Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
19Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
27214 data points

Download Data

Download dataset as tab-delimited text — use the following character encoding:

View dataset as HTML (shows only first 2000 rows)