Citation:

PANGAEA.971386

Name: Seawater carbonate chemistry and emergent properties of free-living nematode assemblages
Published: 2024-07-25
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Community composition and diversity; Entire community; Inorganic toxins; Laboratory experiment; Soft-bottom community; South Atlantic; Temperate; Temperature

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Abstract:

In this study, we investigated the interaction effects of three stress factors, namely i-metallic mixture of Cu, Pb, Zn, and Hg (control [L0], low, [L1] and high [L2]), ii- CO2-driven acidification (pH 7.6 and 8.0), and iii- temperature rise (26 and 28 ◦C), on estuarine free-living nematode assemblages.

This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-07-25.

Keyword(s):

Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Community composition and diversity; Entire community; Inorganic toxins; Laboratory experiment; Soft-bottom community; South Atlantic; Temperate; Temperature

Related to:

Oliveira, Nilvea Ramalho; Altafim, Giam Luca; Alves, Aline Vecchio; Choueri, R B; Zanette, Juliano; Figueira, Rubens César Lopes; Gallucci, Fabiane (2024): Emergent properties of free-living nematode assemblages exposed to multiple stresses. Science of the Total Environment, 912, 168790, https://doi.org/10.1016/j.scitotenv.2023.168790

References:

Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010

Related code / software:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Latitude: -23.763000 * Longitude: -45.773000

Date/Time Start: 2017-12-01T00:00:00 * Date/Time End: 2017-12-31T00:00:00

Event(s):

Barra_do_Rio_Itaguar * Latitude: -23.763000 * Longitude: -45.773000 * Date/Time Start: 2017-12-01T00:00:00 * Date/Time End: 2017-12-31T00:00:00 * Method/Device: Experiment (EXP)

Parameter(s):

#	Name	Short Name	Unit	Method/Device	Comment
1	Type of study	Study type
2	Treatment	Treat
3	Treatment: temperature	T:temp	°C
4	Treatment: pH	T:pH
5	Treatment	Treat
6	Number of genera	Genera	#		Aegialoalaimus, per microcosm
7	Number of genera	Genera	#		Anonchus, per microcosm
8	Number of genera	Genera	#		Anoplostoma, per microcosm
9	Number of genera	Genera	#		Ascolaimus, per microcosm
10	Number of genera	Genera	#		Campylaimus , per microcosm
11	Number of genera	Genera	#		Cervonema, per microcosm
12	Number of genera	Genera	#		Chromadora, per microcosm
13	Number of genera	Genera	#		Chromadoridae, per microcosm
14	Number of genera	Genera	#		Chromadorita, per microcosm
15	Number of genera	Genera	#		Cobbia, per microcosm
16	Number of genera	Genera	#		Cyartonema, per microcosm
17	Number of genera	Genera	#		Cyatholaimidae, per microcosm
18	Number of genera	Genera	#		Daptonema, per microcosm
19	Number of genera	Genera	#		Dasynemella, per microcosm
20	Number of genera	Genera	#		Dasynemoides, per microcosm
21	Number of genera	Genera	#		Desmodora, per microcosm
22	Number of genera	Genera	#		Desmodoridae, per microcosm
23	Number of genera	Genera	#		Dichromadora, per microcosm
24	Number of genera	Genera	#		Disconema, per microcosm
25	Number of genera	Genera	#		Dorylaimidae , per microcosm
26	Number of genera	Genera	#		Elzalia, per microcosm
27	Number of genera	Genera	#		Gomphionema, per microcosm
28	Number of genera	Genera	#		Halalaimus, per microcosm
29	Number of genera	Genera	#		Halichoanolaimus , per microcosm
30	Number of genera	Genera	#		Haliplectus, per microcosm
31	Number of genera	Genera	#		Hypodontolaimus , per microcosm
32	Number of genera	Genera	#		Leptolaimellus, per microcosm
33	Number of genera	Genera	#		Leptolaimus, per microcosm
34	Number of genera	Genera	#		Linhomoeus, per microcosm
35	Number of genera	Genera	#		Linhomoidae, per microcosm
36	Number of genera	Genera	#		Metacromadora, per microcosm
37	Number of genera	Genera	#		Metalinhomoeus, per microcosm
38	Number of genera	Genera	#		Microlaimus, per microcosm
39	Number of genera	Genera	#		Monhystera, per microcosm
40	Number of genera	Genera	#		Monhystrella , per microcosm
41	Number of genera	Genera	#		Nannolaimoides, per microcosm
42	Number of genera	Genera	#		Odontophora, per microcosm
43	Number of genera	Genera	#		Oncholaimelus, per microcosm
44	Number of genera	Genera	#		Oncholaimus, per microcosm
45	Number of genera	Genera	#		Oxystomina, per microcosm
46	Number of genera	Genera	#		Paracomesoma, per microcosm
47	Number of genera	Genera	#		Paraconthoncus, per microcosm
48	Number of genera	Genera	#		Pselionema, per microcosm
49	Number of genera	Genera	#		Pseudochromadora, per microcosm
50	Number of genera	Genera	#		Ptycholaimellus, per microcosm
51	Number of genera	Genera	#		Sabatieria, per microcosm
52	Number of genera	Genera	#		Sphaerotheristus , per microcosm
53	Number of genera	Genera	#		Spirinia, per microcosm
54	Number of genera	Genera	#		Therschelingia, per microcosm
55	Number of genera	Genera	#		Throcamus, per microcosm
56	Number of genera	Genera	#		Throcamus , per microcosm
57	Number of genera	Genera	#		Tylenchida, per microcosm
58	Number of genera	Genera	#		Viscosia, per microcosm
59	Number of genera	Genera	#		Xyalidae, per microcosm
60	Copper	Cu	mg/kg
61	Lead	Pb	mg/kg
62	Zinc	Zn	mg/kg
63	Mercury	Hg	mg/kg
64	Temperature, water	Temp	°C
65	Oxygen, dissolved	DO	mg/l
66	Oxygen, dissolved, standard deviation	DO std dev	±
67	Salinity	Sal
68	Salinity, standard deviation	Sal std dev	±
69	pH	pH		Potentiometric	seawater scale
70	pH, standard deviation	pH std dev	±	Potentiometric	seawater scale
71	Alkalinity, total	AT	µmol/kg	Potentiometric titration
72	Alkalinity, total, standard deviation	AT std dev	±	Potentiometric titration
73	Carbon, inorganic, dissolved	DIC	µmol/kg	Calculated using CO2SYS
74	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Calculated using CO2SYS
75	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Calculated using CO2SYS
76	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Calculated using CO2SYS
77	Bicarbonate ion	[HCO3]-	µmol/kg	Calculated using CO2SYS
78	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Calculated using CO2SYS
79	Carbonate ion	[CO3]2-	µmol/kg	Calculated using CO2SYS
80	Carbonate ion, standard deviation	[CO3]2- std dev	±	Calculated using CO2SYS
81	Carbon dioxide	CO2	µmol/kg	Calculated using CO2SYS
82	Carbon dioxide, standard deviation	CO2 std dev	±	Calculated using CO2SYS
83	Calcite saturation state	Omega Cal		Calculated using CO2SYS
84	Calcite saturation state, standard deviation	Omega Cal std dev	±	Calculated using CO2SYS
85	Aragonite saturation state	Omega Arg		Calculated using CO2SYS
86	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Calculated using CO2SYS
87	Carbonate system computation flag	CSC flag		Calculated using seacarb after Nisumaa et al. (2010)
88	pH	pH		Calculated using seacarb after Nisumaa et al. (2010)	total scale
89	Carbon dioxide	CO2	µmol/kg	Calculated using seacarb after Nisumaa et al. (2010)
90	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Calculated using seacarb after Nisumaa et al. (2010)
91	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Calculated using seacarb after Nisumaa et al. (2010)
92	Bicarbonate ion	[HCO3]-	µmol/kg	Calculated using seacarb after Nisumaa et al. (2010)
93	Carbonate ion	[CO3]2-	µmol/kg	Calculated using seacarb after Nisumaa et al. (2010)
94	Carbon, inorganic, dissolved	DIC	µmol/kg	Calculated using seacarb after Nisumaa et al. (2010)
95	Aragonite saturation state	Omega Arg		Calculated using seacarb after Nisumaa et al. (2010)
96	Calcite saturation state	Omega Cal		Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Size:

4929 data points

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