Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Baure, Jerwin G; Roleda, Michael Y; Juinio‑Meñez, Marie Antonette (2024): Marine benthic microalgal primary production and invertebrate grazing under lowered pH and elevated temperature [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.972914

Always quote citation above when using data! You can download the citation in several formats below.

Published: 2024-10-09 • DOI registered: 2024-11-09

RIS CitationBibTeX Citation Copy Citation Share 19 5 3

Abstract:
In the current study, we investigated the direct effects of independent and combined acidification and warming on periphyton and their indirect effects through invertebrate grazing.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-09-30.
Keyword(s):
Amphora sp.; Animalia; Behaviour; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Cocconeis sp.; Echinodermata; Entire community; Laboratory experiment; Mollusca; Navicula jeffreyii; Navicula ramosissima; North Pacific; Other; Single species; Soft-bottom community; Stichopus horrens; Temperature; Trochus maculatus; Tropical
Related to:
Baure, Jerwin G; Roleda, Michael Y; Juinio‑Meñez, Marie Antonette (2023): Short-term exposure to independent and combined acidification and warming elicits differential responses from two tropical seagrass-associated invertebrate grazers. Marine Biology, 170(9), 114, https://doi.org/10.1007/s00227-023-04262-9
Baure, Jerwin G; Roleda, Michael Y; Juinio‑Meñez, Marie Antonette (2024): Benthic diatom response to short-term acidification and warming influenced by grazing and nutrients. Marine Pollution Bulletin, 208, 116956, https://doi.org/10.1016/j.marpolbul.2024.116956
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Comment:
Values for nutrients, except ammonium Experiment 1, from the four reservoir tanks were pooled since there were no significant differences in values based on t-test between acidified and non-acidified reservoir tanks. Values for ammonium in Experiment 1 were separated between acidified and non-acidified treatments.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeBaure, Jerwin G
2ExperimentExpBaure, Jerwin G
3Species, unique identificationSpecies UIDBaure, Jerwin GGrazer
4Species, unique identification (URI)Species UID (URI)Baure, Jerwin GGrazer
5Species, unique identification (Semantic URI)Species UID (Semantic URI)Baure, Jerwin GGrazer
6DateDateBaure, Jerwin G
7TreatmentTreatBaure, Jerwin GpH-Temp
8TreatmentTreatBaure, Jerwin GGrazer
9Ash free dry mass per areaafdmmg/cm2Baure, Jerwin GDiatoms
10Ash free dry mass per area, standard deviationafdm std dev±Baure, Jerwin G
11Chlorophyll aChl aµg/cm2Baure, Jerwin G
12Chlorophyll a, standard deviationChl a std dev±Baure, Jerwin G
13Fecal productionFecal prodmgBaure, Jerwin G
14Fecal production, standard deviationFecal prod std dev±Baure, Jerwin G
15SalinitySalBaure, Jerwin G
16Temperature, waterTemp°CBaure, Jerwin Gin reservoir
17Temperature, water, standard deviationTemp std dev±Baure, Jerwin Gin reservoir
18Temperature, waterTemp°CBaure, Jerwin Gin basins
19Temperature, water, standard deviationTemp std dev±Baure, Jerwin Gin basins
20pH, total scalepHTBaure, Jerwin Gtotal scale
21pH, standard deviationpH std dev±Baure, Jerwin Gtotal scale
22Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmBaure, Jerwin G
23Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Baure, Jerwin G
24Bicarbonate ion[HCO3]-µmol/kgBaure, Jerwin G
25Bicarbonate ion, standard deviation[HCO3]- std dev±Baure, Jerwin G
26Carbonate ion[CO3]2-µmol/kgBaure, Jerwin G
27Carbonate ion, standard deviation[CO3]2- std dev±Baure, Jerwin G
28Carbon dioxideCO2µmol/kgBaure, Jerwin GCalculated using CO2SYS
29Carbon dioxide, standard deviationCO2 std dev±Baure, Jerwin GCalculated using CO2SYS
30Carbon, inorganic, dissolvedDICµmol/kgBaure, Jerwin G
31Carbon, inorganic, dissolved, standard deviationDIC std dev±Baure, Jerwin G
32Alkalinity, totalATµmol/kgBaure, Jerwin G
33Alkalinity, total, standard deviationAT std dev±Baure, Jerwin G
34Phosphate[PO4]3-µmol/lBaure, Jerwin G
35Phosphate, standard deviation[PO4]3- std dev±Baure, Jerwin G
36Nitrate[NO3]-µmol/lBaure, Jerwin G
37Nitrate, standard deviationNO3 std dev±Baure, Jerwin G
38Nitrite[NO2]-µmol/lBaure, Jerwin G
39Nitrite, standard deviation[NO2]- std dev±Baure, Jerwin G
40Ammonium[NH4]+µmol/lBaure, Jerwin G
41Ammonium, standard deviation[NH4]+ std dev±Baure, Jerwin G
42Nitrogen/Phosphorus ratioN/PBaure, Jerwin G
43SilicateSi(OH)4µmol/lBaure, Jerwin G
44Silicate, standard deviationSi(OH)4 std dev±Baure, Jerwin G
45Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
47pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
48Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Carbon dioxide, standard deviationCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
50Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Fugacity of carbon dioxide in seawater, standard deviationfCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
52Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
54Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
55Bicarbonate ion, standard deviation[HCO3]- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
56Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
57Carbonate ion, standard deviation[CO3]2- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
58Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
59Aragonite saturation state, standard deviationOmega Arg std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
60Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
61Calcite saturation state, standard deviationOmega Cal std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
5752 data points

Download Data

Download dataset as tab-delimited text — use the following character encoding:

View dataset as HTML (shows only first 2000 rows)