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Swiney, Katherine M; Long, William Christopher; Foy, Robert J (2024): Seawater carbonate chemistry and effects of high pCO2 on Tanner crab reproduction and early life history [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.973636 (DOI registration in progress)

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Abstract:
To examine the effects of long-term exposure on Tanner crab (Chionoecetes bairdi) embryonic development, hatching success, and calcification, ovigerous females were reared in one of three treatments: ambient pH (8.1), pH 7.8, and pH 7.5 for 2 year.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Alaska Fisheries Science Center (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-11-22.
Keyword(s):
Animalia; Arthropoda; Benthic animals; Benthos; Chionoecetes bairdi; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Development; Growth/Morphology; Laboratory experiment; North Pacific; Reproduction; Single species; Temperate
Related to:
Swiney, Katherine M; Long, William Christopher; Foy, Robert J (2016): Effects of high pCO2 on Tanner crab reproduction and early life history—Part I: long-term exposure reduces hatching success and female calcification, and alters embryonic development. ICES Journal of Marine Science, 73(3), 825-835, https://doi.org/10.1093/icesjms/fsv201
Source:
Alaska Fisheries Science Center (2024): AFSC/RACE/SAP/Foy: Effects of ocean acidification on embryo stages of Tanner crab: Kodiak Island, Alaska [dataset]. InPort, https://www.fisheries.noaa.gov/inport/item/27850
Alaska Fisheries Science Center (2024): AFSC/RACE/SAP/Foy: Effects of ocean acidification on larval Tanner crab: Kodiak Island, Alaska [dataset]. InPort, https://www.fisheries.noaa.gov/inport/item/27853
Alaska Fisheries Science Center (2024): AFSC/RACE/SAP/Foy: Seawater chemistry of three pH treatments used to test the effect of pH on Tanner crab biology: Kodiak Island, Alaska [dataset]. InPort, https://www.fisheries.noaa.gov/inport/item/26898
Alaska Fisheries Science Center (2024): AFSC/RACE/SAP/Foy: The effects of ocean acidification on ovigerous Tanner crab size, calcium, and magnesium content. : Kodiak Island, Alaska [dataset]. InPort, https://www.fisheries.noaa.gov/inport/item/27842
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Coverage:
Latitude: 57.720800 * Longitude: -152.291700
Date/Time Start: 2011-07-01T00:00:00 * Date/Time End: 2013-07-06T00:00:00
Event(s):
Chiniak_Bay * Latitude: 57.720800 * Longitude: -152.291700 * Date/Time Start: 2011-07-01T00:00:00 * Date/Time End: 2013-07-06T00:00:00 * Method/Device: Experiment (EXP)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeSwiney, Katherine M
2Species, unique identificationSpecies UIDSwiney, Katherine M
3Species, unique identification (URI)Species UID (URI)Swiney, Katherine M
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Swiney, Katherine M
5IdentificationIDSwiney, Katherine Mtub
6TreatmentTreatSwiney, Katherine M
7DateDateSwiney, Katherine Mmeasurement
8Eggs areaEggs Amm2Swiney, Katherine M
9Eggs, diameterEggs diammmSwiney, Katherine Mmaximum
10Eggs, diameterEggs diammmSwiney, Katherine Mminimum
11Eggs, diameterEggs diammmSwiney, Katherine Maverage
12Yolk areaYolk Amm2Swiney, Katherine M
13Yolk, diameterYolk diammmSwiney, Katherine Mmaximum
14Yolk, diameterYolk diammmSwiney, Katherine Mminimum
15Yolk, diameterYolk diammmSwiney, Katherine Maverage
16Embryo, areaEmbryo amm*2Swiney, Katherine M
17Eye, areaEye amm*2Swiney, Katherine M
18Eye, diameterEye diammmSwiney, Katherine Mmaximum
19Eye, diameterEye diammmSwiney, Katherine Mminimum
20Eye, diameterEye diammmSwiney, Katherine Maverage
21Carapace widthCarap wmmSwiney, Katherine Mfemales
22LarvaeLarvae#Swiney, Katherine Mhatched
23DateDateSwiney, Katherine Mfirst day that hatching began
24DateDateSwiney, Katherine Mpleopods were stripped
25Time in daysTimedaysSwiney, Katherine Mdays from start to finish of hatch
26Eggs, fertilizedFert eggs#Swiney, Katherine M(other name of this stage of the animal life cycle is pre-larva)
27Eggs, unhatchedEggs unhatch#Swiney, Katherine M
28Numbern#Swiney, Katherine MA subset of the clutch is weighed and counted and then the count is scaled up to the total weight of the clutch
29Egg hatching successEgg hatch success%Swiney, Katherine M
30PercentagePerc%Swiney, Katherine Mpre-zoea for each treatment
31PercentagePerc%Swiney, Katherine Mdead eggs for each treatment
32DateDateSwiney, Katherine Membryos extruded from ovary
33DateDateSwiney, Katherine Mthe first day that hatching began during the experiment
34Time in daysTimedaysSwiney, Katherine Mnumber of days embryos were brooded
35SalinitySalSwiney, Katherine M
36Temperature, waterTemp°CSwiney, Katherine M
37pH, total scalepHTSwiney, Katherine Mtotal scale
38Carbon, inorganic, dissolvedDICµmol/kgSwiney, Katherine M
39Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
257937 data points

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