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Thielecke, Antonia; Whitehouse, Martin J; Fernández-Méndez, Mar: Single cell carbon, nitrate and silicic acid uptake rates of Arctic phytoplankton in response to light and silicic acid interactions (SIMS) [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.991544 (dataset in review)

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Abstract:
This data was collected during the Polarstern cruise PS138 (ArcWatch1) from August 3 to September 30, 2023 to the Central Arctic Ocean. At three stations during the Polarstern cruise PS138 (ArcWatch1) we conducted bioassays on board in order to assess the interactive effects of light and dSi on single cell uptake rates of carbon (C), nitrogen (N), and silicon (Si) for various phytoplankton groups. Single-cell uptake rates were obtained at stations 3, 4 and 5 for each dSi level (0, 2, 5, 10, 20 µM added dSi) at the 80 µmol photons m-2 s-1 light level and for each light level (0, 10, 40, 80, 320 µmol photons m-2 s-1) at the 5 µM added dSi level, resulting in a total of 9 samples for each station. For each bioassay we collected water samples from the chlorophyll maximum (Chl a max) using a CTD rosette, prefiltered the water with a 200 µm mesh and added different concentrations of dSi (0, 2, 5, 10, and 20 µmol L⁻¹ above ambient concentrations) to establish a dSi gradient. Samples were spiked with 13C labelled sodium bicarbonate, 15N labelled potassium nitrate and 30Si-sodium metasilicate at a 10% enrichment level. To avoid insufficient cell densities on the resulting filters, we added concentrated phytoplankton to the cell culture bottles. The phytoplankton community from the same depth was concentrated using reverse filtration and 2 mL of the concentrate corresponding to ~1.5-2.5 L of concentrated volume were added to each cell culture bottle before the incubation. After 24h of incubation the samples were fixed with 2 % EM-grade paraformaldehyde (PFA; EMS, USA) for 24 h in the dark at 4 °C. The fixed cells were then filtered onto 2 μm pore size polycarbonate filters (ø 25 mm; Merck Millipore Ltd., Cork, Ireland) and washed with phosphate-buffered saline (Merck Millipore Ltd., Cork, Ireland ). Single-cell 15N, 13C and 30Si assimilation rates were determined by high resolution secondary ion mass spectrometry (HR-SIMS; IMS 1280, CAMECA, Gennevilliers, France) at the Natural History Museum in Stockholm, Sweden. From the single-cell data we identified five different phytoplankton types (centric diatoms, pennate diatoms, elliptic dinoflagellates, spherical dinoflagellates, silicoflagellates and small flagellates <10µm length). Biovolumes were calculated assuming standard phytoplankton shapes (Hillebrand et al., 1999) and estimated fixed width:height ratios using microscopy and observations of SIMS measurements.
Keyword(s):
Light; nutrient limitation; Phytoplankton composition; primary productivity; silicic acid; SIMS; stable isotope labelling
Related to:
Hillebrand, Helmut; Dürselen, Claus-Dieter; Kirschtel, David; Pollingher, U; Zohary, Tamar (1999): Biovolume calculation for pelagic and benthic microalgae. Journal of Phycology, 35(2), 403-424, https://doi.org/10.1046/j.1529-8817.1999.3520403.x
Thielecke, Antonia; Eggers, Sarah Lena; Allhusen, Erika; Murawski, Sandra; Tippenhauer, Sandra; Rabe, Benjamin; Torres-Valdés, Sinhué: Environmental data collected during PS138 (ArcWatch1) supporting bioassays measuring carbon, nitrate and silica uptake in response to light and silicic acid interactions (EnvironmentalData) [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.991537
Thielecke, Antonia; Krause, Jeffrey W; Stefels, Jacqueline; Torres-Valdés, Sinhué; Bryan, Natasha; Fernández-Méndez, Mar: Bulk carbon, nitrate and silicic acid uptake rates of Arctic phytoplankton in response to interactive light and silicic acid gradients (CNSiUptake): [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.991536
Thielecke, Antonia; Krause, Jeffrey W; Torres-Valdés, Sinhué; Eggers, Sarah Lena; Bryan, Natasha; Narberhaus, Anna; Rabe, Benjamin; Stefels, Jacqueline; Whitehouse, Martin J; Jeon, Heejin; Fernández-Méndez, Mar (in review): Light and silicic acid co-limit late summer primary productivity across the Central Arctic Ocean.
Thielecke, Antonia; Narberhaus, Anna: Phytoplankton taxonomy from bioassays for carbon, nitrate and silica uptake of Arctic phytoplankton in response to light and silicic acid interactions (Microscopy) [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.991539
Torres-Valdés, Sinhué; Thielecke, Antonia: Profiles of nitrate and nitrite and silicic acid during PS138 (ArcWatch 1) to the Central Arctic Ocean (NutrientProfiles) [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.991545
Funding:
Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven (AWI), grant/award no. AWI_PS138_02: Biological Oceanography
Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven (AWI), grant/award no. AWI_PS138_03: Physical and Chemical Oceanography
Coverage:
Median Latitude: 87.583170 * Median Longitude: 61.731899 * South-bound Latitude: 85.033489 * West-bound Longitude: -1.940574 * North-bound Latitude: 89.771984 * East-bound Longitude: 130.013152
Date/Time Start: 2023-08-29T17:25:16 * Date/Time End: 2023-09-14T12:29:24
Minimum Elevation: -4376.0 m * Maximum Elevation: -4242.0 m
Event(s):
PS138_109-1 * Latitude: 85.033489 * Longitude: 130.013152 * Date/Time: 2023-08-29T17:25:16 * Elevation: -4301.0 m * O2A Registry URI: https://registry.o2a-data.de/items/5452 * Campaign: PS138 (ArcWatch-1) * Basis: Polarstern * Method/Device: CTD/Rosette (CTD-RO) * Comment: IceStation #5, at max depth
PS138_162-1 * Latitude: 89.771984 * Longitude: -1.940574 * Date/Time: 2023-09-10T21:13:40 * Elevation: -4242.0 m * O2A Registry URI: https://registry.o2a-data.de/items/5452 * Campaign: PS138 (ArcWatch-1) * Basis: Polarstern * Method/Device: CTD/Rosette (CTD-RO) * Comment: IceStation #7, at max depth
PS138_186-1 * Latitude: 87.944038 * Longitude: 57.123119 * Date/Time: 2023-09-14T12:29:24 * Elevation: -4376.0 m * O2A Registry URI: https://registry.o2a-data.de/items/5452 * Campaign: PS138 (ArcWatch-1) * Basis: Polarstern * Method/Device: CTD/Rosette (CTD-RO) * Comment: IceStation #8, at max depth
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventThielecke, Antonia
2Type of studyStudy typeThielecke, Antonia
3Ice-stationIce-stationThielecke, Antonia
4Treatment: silica, dissolved, addedT: Si diss addµmol/lThielecke, Antonia
5Treatment: light intensityT:Ioµmol/m2/sThielecke, Antonia
6File nameFile nameThielecke, Antonia
7TypeTypeThielecke, AntoniaCell type; manual identifier grouping the cells in broad taxonomic and geometric categories
8Method commentMethod commThielecke, AntoniaFull cell [yes/no]; manual identifier if the ROI encloses a full or partial cell
9AreaAreaµm2Thielecke, Antonia
10Number of pixelsNo pix#Thielecke, Antonia
11Atom percent, 15N/14NAt per 15N/14N%Thielecke, AntoniaSecondary ion mass spectrometry (SIMS), Cameca, IMS1280-HR
12Atom percent, 15N/14N, standard deviationAt per 15N/14N std dev±Thielecke, AntoniaSecondary ion mass spectrometry (SIMS), Cameca, IMS1280-HR
13Atom percent, 13C/12CAt per 13C/12C%Thielecke, AntoniaSecondary ion mass spectrometry (SIMS), Cameca, IMS1280-HR
14Atom percent, 13C/12C, standard deviationAt per 13C/12C std dev±Thielecke, AntoniaSecondary ion mass spectrometry (SIMS), Cameca, IMS1280-HR
15Atom percent, 30Si/28SiAt per 30Si/28Si%Thielecke, AntoniaSecondary ion mass spectrometry (SIMS), Cameca, IMS1280-HR
16Atom percent, 30Si/28Si, standard deviationAt per 30Si/28Si std dev±Thielecke, AntoniaSecondary ion mass spectrometry (SIMS), Cameca, IMS1280-HR
17Atom percent, 30SiAt perc 30Si%Thielecke, Antoniacalculated from normalized ratio
18Atom percent, 15NAt perc 15N%Thielecke, Antoniacalculated from normalized ratio
19Atom percent, 13CAt perc 13C%Thielecke, Antoniacalculated from normalized ratio
20Cell biovolumeCell biovolµm3Thielecke, AntoniaEsimated using the area and standardized geometric shapes for 5 different phytoplankton types after Hillebrand et al. (1999)
21Carbon, organic, particulate, per cellPOC/cellpg/#Thielecke, Antoniaafter Menden-Deuer and Lessard (2000)
22Carbon uptake rate, specificC upt rate spec1/dayThielecke, Antoniaafter Slawyk et al. (1977)
23Nitrate uptake rate, specificNO3 upt rate spec1/dayThielecke, Antoniaafter Shiozaki et al. (2009)
24Dissolved silica uptake rate, specificdSi upt rate spec1/dayThielecke, AntoniaSi uptake (Nelson & Goering, 1977)
25Carbon uptake, per cellC upt/cellpg/#/dayThielecke, Antoniaafter Shiozaki et al. (2009)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
14320 data points

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