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Bock, Christian; Götze, Sandra; Pörtner, Hans-Otto; Lannig, Gisela (2025): Seawater carbonate chemistry and the mechanisms behind swimming performance of Atlantic king scallop [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.979980 (DOI registration in progress)

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Published: 2025-03-27

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Abstract:
In the present study we therefore used a semitargeted, multi tissue NMR based metabolomic approach to analyze metabolite patterns in the Atlantic king scallop, Pecten maximus, that were long-term acclimated to different end of century conditions of ocean warming (OW), ocean acidification (OA) and their combination (OWA). We investigated tissue specific metabolic profiles and metabolite concentrations in frozen tissues from gills, mantle and phasic and tonic adductor muscle of P. maximus under present conditions using 1H-HR-MAS NMR spectroscopy.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Keyword(s):
Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Laboratory experiment; Mollusca; North Atlantic; Other studied parameter or process; Pecten maximus; Single species; Temperate; Temperature
Related to:
Bock, Christian; Götze, Sandra; Pörtner, Hans-Otto; Lannig, Gisela (2024): Exploring the mechanisms behind swimming performance limits to ocean warming and acidification in the Atlantic king scallop, Pecten maximus. Frontiers in Ecology and Evolution, 12, 1347160, https://doi.org/10.3389/fevo.2024.1347160
Source:
Schalkhausser, Burgel; Bock, Christian; Pörtner, Hans-Otto; Lannig, Gisela (2014): Escape performance of temperate king scallop, Pecten maximus under ocean warming and acidification [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.843533
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.6. https://cran.r-project.org/package=seacarb
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeBock, Christian
2Species, unique identificationSpecies UIDBock, Christian
3Species, unique identification (URI)Species UID (URI)Bock, Christian
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Bock, Christian
5TissuesTissuesBock, Christian
6TreatmentTreatBock, Christian
7Metabolite concentrationMetabolAUBock, ChristianATP
8Metabolite concentrationMetabolAUBock, ChristianAcetate
9Metabolite concentrationMetabolAUBock, ChristianAlanine
10Metabolite concentrationMetabolAUBock, ChristianGlutamate
11Metabolite concentrationMetabolAUBock, ChristianGlutamine
12Metabolite concentrationMetabolAUBock, ChristianGlycolate
13Metabolite concentrationMetabolAUBock, ChristianL-Arginine
14Metabolite concentrationMetabolAUBock, ChristianLactate
15Metabolite concentrationMetabolAUBock, ChristianLeucine
16Metabolite concentrationMetabolAUBock, ChristianO-Phosphocholine
17Metabolite concentrationMetabolAUBock, ChristianSuccinylacetone
18Metabolite concentrationMetabolAUBock, ChristianThreonine
19CarnitineCarnitineAUBock, Christian
20Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetPaBock, ChristianCalculated using CO2SYS
21Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Bock, ChristianCalculated using CO2SYS
22Temperature, waterTemp°CBock, Christian
23Temperature, water, standard deviationTemp std dev±Bock, Christian
24pH, NBS scalepH NBSBock, ChristianPotentiometric
25pH, standard deviationpH std dev±Bock, ChristianPotentiometricNBS scale
26pH, total scalepHTBock, Christian
27pH, standard deviationpH std dev±Bock, Christiantotal scale
28SalinitySalBock, Christian
29Salinity, standard deviationSal std dev±Bock, Christian
30Carbon, inorganic, dissolvedDICmmol/lBock, ChristianCoulometric titration
31Carbon, inorganic, dissolved, standard deviationDIC std dev±Bock, ChristianCoulometric titration
32Carbonate system computation flagCSC flagYang, Yan
33Carbon dioxideCO2µmol/kgYang, Yan
34Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, Yan
35Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, Yan
36Bicarbonate ion[HCO3]-µmol/kgYang, Yan
37Carbonate ion[CO3]2-µmol/kgYang, Yan
38Carbon, inorganic, dissolvedDICµmol/kgYang, Yan
39Alkalinity, totalATµmol/kgYang, Yan
40Aragonite saturation stateOmega ArgYang, Yan
41Calcite saturation stateOmega CalYang, Yan
Size:
10098 data points

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