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Data Publisher for Earth & Environmental Science

Coulmance, Floriane; Heckwolf, Melanie; Gismann, Jakob; Kafle, Tane; Domínguez-Domínguez, Omar; Awhida, Karim; Helmkampf, Martin; McMillan, W Owen; Puebla, Oscar: Phenotypic variation within and between species during early radiation stages [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.974433 (dataset in review)

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Abstract:
This dataset comprises 571 live photographs of hamlets (Hypoplectrus spp.). The photographs are in raw format .CR2 from a Canon camera. This dataset spans 14 hamlet species from 7 locations in the wider Caribbean: Panama, Belize, Mexico, Puerto Rico, US Virgin Islands, Tobago and the Florida Keys (USA). Photographs were taken in situ underwater. This dataset was used in a newly developed quantitative image analysis pipeline to comprehensively assess phenotypic variation accross the whole hamlet radiation.
Keyword(s):
diversification; genomic; Hypoplectrus; phenotypes; sympatric speciation; variation
Related to:
Coulmance, Floriane; Akkaynak, Derya; Le Poul, Yann; Hoppner, Marc P; McMillan, W Owen; Puebla, Oscar (2025): Photographs used to develop a standardized and fully quantitative pipeline for color pattern analysis in coral reef fishes [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.974445
Funding:
Smithsonian Tropical Research Institute, grant/award no. D. Ross Robertson Fellowship: D. Ross Robertson Fellowship at the Smithsonian Tropical Research Institute
Coverage:
Median Latitude: 13.798442 * Median Longitude: -77.297751 * South-bound Latitude: -9.381655 * West-bound Longitude: -96.073722 * North-bound Latitude: 25.043667 * East-bound Longitude: -60.798570
Date/Time Start: 2017-03-18T00:00:00 * Date/Time End: 2023-06-12T00:00:00
Event(s):
Hypoplectrus_Aligator_Reef_outer_reef (Aligator Reef (outer reef)) * Latitude: 24.846800 * Longitude: -80.622960 * Location: USA * Method/Device: Digital camera, Canon, EOS M3
Hypoplectrus_Bastimentos_Starfish_Reef (Bastimentos, Starfish Reef) * Latitude: 9.332226 * Longitude: -82.199470 * Location: Panama * Method/Device: Digital camera, Canon, EOS M3
Hypoplectrus_Behind_Blue_Coconut_Solarte_B_1 (Behind Blue Coconut, Solarte B) * Latitude: 9.334167 * Longitude: -82.292220 * Location: Panama * Method/Device: Digital camera, Canon, EOS M3
Comment:
This work required ethical approval from the STRI Animal Care and Use Committee (ACUC) and was obtained under the number SI-22010.
The tan hamlet (ID: PL17_125) has not been described yet. The species name is therefore only given as Hypoplectrus.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventCoulmance, Floriane
2Sample code/labelSample labelCoulmance, Floriane
3IdentificationIDCoulmance, Floriane
4Species, unique identificationSpecies UIDCoulmance, FlorianeHypoplectrus (sp.)/Tan hamlet (undescribed yet)
5Species, unique identification (Semantic URI)Species UID (Semantic URI)Coulmance, FlorianeHypoplectrus (sp.)/Tan hamlet (undescribed yet)
6Species, unique identification (URI)Species UID (URI)Coulmance, FlorianeHypoplectrus (sp.)/Tan hamlet (undescribed yet)
7CountryCountryCoulmance, Floriane
8Region, geneticRegionCoulmance, Floriane
9SiteSiteCoulmance, Floriane
10Method commentMethod commCoulmance, Floriane
11Image, under waterIMAGE waterCoulmance, FlorianeDigital camera, Canon, EOS M3Raw Photo
12LATITUDELatitudeCoulmance, FlorianeGeocode
13LONGITUDELongitudeCoulmance, FlorianeGeocode
14Elevation descriptionElevation descrCoulmance, Floriane
15DATE/TIMEDate/TimeCoulmance, FlorianeGeocode – date
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Basic curation (CurationLevelB)
Size:
5139 data points

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