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Olivar, M Pilar; Chouvelon, Tiphaine; Loutrage, Liz; Spitz, Jérôme; Bernal, Ainhoa; Lebon, Myriam; Silva, Mónica A: Compilation of new estimations on trophic positions of marine biota from the temperate Atlantic and western Mediterranean [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.971985 (dataset in review)

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Abstract:
Oceanic food webs are organized in a continuum from microbial to metazoan linked by trophic interactions. Assessment of the position of organisms in the food web, i.e., their Trophic Level (TL) can be made by from direct analyses of stomach contents or indirectly using tracers like stable isotopes. The present file gives TL for marine organism derived from isotopic data (δ15N) presented in Olivar et al. (submitted to PANGAEA). This file follows a previous data file on TL of mesopelagic organism by Silva et al. (2022) and keeps the same layout. We present estimates of Trophic Levels from 770 samples encompassing 32 species of mesopelagic fish, 7 of crustacean decapods, and 17 species of cetaceans. Fish and crustacean samples come from the temperate Atlantic (Azores, Bay of Biscay, western Iberian Peninsula), and from the western Mediterranean. The baseline to calculate TL for the western Iberian Peninsula and western Mediterranean organisms were the isotopic data of herbivorous copepods obtained concurrently, while for the Bay of Biscay values of the euphausiid Meganyctiphanes norvegica were used. All the cetaceans (order Cetartiodactyla) come from the Azores or the Bay of Biscay. Western Iberian Peninsula and western Mediterranean mesopelagic fish diets from stomach content analyses of the same specimens included in this table are given in Bernal et al. (2023). For each data record, it is provided the sampling location, geographic coordinates, month and year of sample collection, method of sample collection, taxonomic ranks (phylum, class, order, family), number and size (or size range) of sampled organisms, type of analyses and estimation method, as well as the reference and DOI of the original data source, for further details on the samples analysed and/or the analytical techniques used.
Keyword(s):
Decapoda; Mammalia; mesopelagic fish; mesopelagic food web; Myctophiformes; Stomiiformes; trophic level
Related to:
Olivar, M Pilar; Silva, Mónica A; Spitz, Jérôme; Bernal, Ainhoa; Chouvelon, Tiphaine; Lebon, Myriam; Loutrage, Liz (2024): Compilation of new data on stable nitrogen and carbon isotope ratios of marine biota from the subarctic and temperate Atlantic, and western Mediterranean Sea [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.971934
References:
Bernal, Ainhoa; Olivar, M Pilar (2023): Compilation of stomach content data from temperate Atlantic and western Mediterranean mesopelagic fishes captured during the CSIC-SUMMER survey in October 2020 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.964013
Bernal, Ainhoa; Tuset, Víctor M; Olivar, M Pilar (2023): Multiple Approaches to the Trophic Role of Mesopelagic Fish around the Iberian Peninsula. Animals, 13(5), 886, https://doi.org/10.3390/ani13050886
Lebon, Myriam; Colaço, Ana; Prieto, Rui; Cascão, Irma; Oliveira, Cláudia; Tobeña, Marta; Planque, Yann; Spitz, Jérôme; Silva, Mónica A (2024): Isotopic niches reveal the trophic structure of the cetacean community in the oceanic waters around the Azores. Frontiers in Marine Science, 11, 1283357, https://doi.org/10.3389/fmars.2024.1283357
Loutrage, Liz; Brind'Amour, Anik; Chouvelon, Tiphaine; Spitz, Jérôme (2024): High trophic specialization structures the epi- to bathypelagic fish community in the Bay of Biscay. Deep Sea Research Part I: Oceanographic Research Papers, 209, 104347, https://doi.org/10.1016/j.dsr.2024.104347
Loutrage, Liz; Brind'Amour, Anik; Chouvelon, Tiphaine; Spitz, Jérôme (2024): Ontogenetic shift or not? Different foraging trade‐offs within the meso‐ to bathypelagic fish community. Ecology and Evolution, 14(3), e11129, https://doi.org/10.1002/ece3.11129
Olivar, M Pilar; Castellón, Arturo; Sabatés, Ana; Sarmiento Lezcano, Airam Nauzet; Bernal, Ainhoa (2022): Abundance of mesopelagic fish collected at different layers of the water column around the Iberian Peninsula [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.947631
Olivar, M Pilar; Castellón, Arturo; Sabatés, Ana; Sarmiento Lezcano, Airam Nauzet; Emelianov, Mikhail; Bernal, Ainhoa; Yang, Yang; Proud, Roland; Brierley, Andrew S (2022): Variation in mesopelagic fish community composition and structure between Mediterranean and Atlantic waters around the Iberian Peninsula. Frontiers in Marine Science, 9, 1028717, https://doi.org/10.3389/fmars.2022.1028717
Silva, Mónica A; Colaço, Ana; Olivar, M Pilar; Bernal, Ainhoa; Chouvelon, Tiphaine; Fonseca, Catarina T; Pérez-Jorge, Sergi (2022): Compilation of trophic positions of marine biota from the central and Northeast Atlantic, and the Mediterranean Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.945968
Silva, Mónica A; Olivar, M Pilar; Bernal, Ainhoa; Colaço, Ana; Chouvelon, Tiphaine; Spitz, Jérôme; Fonseca, Catarina T; Pérez-Jorge, Sergi (2022): Compilation of stable nitrogen and carbon isotope ratios of marine biota from the central and Northeast Atlantic, and the Mediterranean Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.945917
Funding:
Horizon 2020 (H2020), grant/award no. 817806: Sustainable management of mesopelagic resources
Coverage:
Median Latitude: 38.426763 * Median Longitude: -4.759044 * South-bound Latitude: 35.852000 * West-bound Longitude: -30.384100 * North-bound Latitude: 50.989400 * East-bound Longitude: 2.769300
Date/Time Start: 2008-06-13T00:00:00 * Date/Time End: 2024-10-18T08:30:00
Minimum DEPTH, water: 12.5 m * Maximum DEPTH, water: 2000.0 m
Event(s):
29SG20200929_Bongo_7B * Latitude: 38.074800 * Longitude: -9.395600 * Date/Time: 2020-10-17T20:40:00 * Location: Sea off Lisbon, Atlantic Ocean * Campaign: 29SG20200929 (SUMMER) * Basis: Sarmiento de Gamboa * Method/Device: Bongo net (BONGO)
29SG20200929_MOC01_1 (MOC01_1) * Latitude Start: 38.470000 * Longitude Start: 2.677000 * Latitude End: 38.466700 * Longitude End: 2.690300 * Date/Time Start: 2020-09-30T14:20:00 * Date/Time End: 2020-09-30T14:34:00 * Mesh size: 2 mm * Location: Balear Sea * Campaign: 29SG20200929 (SUMMER) * Basis: Sarmiento de Gamboa * Method/Device: MOCNESS opening/closing plankton net (MOC)
29SG20200929_MOC01_2 (MOC01_2) * Latitude Start: 38.466700 * Longitude Start: 2.690300 * Latitude End: 38.466200 * Longitude End: 2.701800 * Date/Time Start: 2020-09-30T14:34:00 * Date/Time End: 2020-09-30T14:47:00 * Mesh size: 2 mm * Location: Balear Sea * Campaign: 29SG20200929 (SUMMER) * Basis: Sarmiento de Gamboa * Method/Device: MOCNESS opening/closing plankton net (MOC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventOlivar, M Pilar
2Record numberRNOlivar, M Pilar
3Station labelStationOlivar, M Pilar
4DATE/TIMEDate/TimeOlivar, M PilarGeocode
5Ocean and sea regionOS regionOlivar, M Pilar
6LocationLocationOlivar, M Pilar
7LATITUDELatitudeOlivar, M PilarGeocode
8LONGITUDELongitudeOlivar, M PilarGeocode
9MonthMonthOlivar, M Pilarstart
10MonthMonthOlivar, M Pilarend
11Year of observationYear obsa ADOlivar, M Pilarstart
12Year of observationYear obsa ADOlivar, M Pilarend
13GearGearOlivar, M Pilar
14Depth, water, top/minimumDepth water topmOlivar, M Pilar
15Depth, water, bottom/maximumDepth water botmOlivar, M Pilar
16DEPTH, waterDepth watermOlivar, M PilarCalculated average/mean valuesGeocode
17OrganismsOrgOlivar, M Pilartype
18PhylumPhylumOlivar, M Pilar
19ClassClassOlivar, M Pilar
20OrderOrderOlivar, M Pilar
21FamilyFamilyOlivar, M Pilar
22Taxon/taxaTaxaOlivar, M Pilar
23Taxon/taxa, unique identificationTaxa UIDOlivar, M Pilar
24Taxon/taxa, unique identification (URI)Taxa UID (URI)Olivar, M Pilar
25Taxon/taxa, unique identification (Semantic URI)Taxa UID (Semantic URI)Olivar, M Pilar
26Number of individualsInd No#Olivar, M Pilarminimum per sample
27Number of individualsInd No#Olivar, M Pilarmaximum per sample
28ReplicatesRepl#Olivar, M Pilarpools of individuals
29SizeSizecmOlivar, M Pilarindividuals, minimum
30SizeSizecmOlivar, M Pilarindividuals, maximum
31SizeSizeOlivar, M Pilarreported
32Trophic levelTrophic levelOlivar, M Pilarmean when maximum number of individuals > 1
33Trophic level, standard deviationTrophic level std dev±Olivar, M Pilar
34Analytical methodMethodOlivar, M PilarAnalysis used for Trophic level estimation
35Method commentMethod commOlivar, M PilarMethod used to estimate the Trophic level
36Tissue descriptorTissue descriptorOlivar, M Pilar
37Reference/sourceReferenceOlivar, M Pilar
38InstitutionInstitutionOlivar, M Pilar
39InvestigatorInvestigatorOlivar, M Pilar
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
22210 data points

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