Titschack, Jürgen; Schmitt, Kira; Baum, Daniel: Directed edges of the colony skeleton graph from Lophelia pertusa colony sample SaM-ID43148 [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.969455 (dataset in review), In: Titschack, Jürgen; Schmitt, Kira; Baum, Daniel; Büscher, Janina; Form, Armin; Tracey, Dianne M; Mills, Sadie; Wienberg, Claudia; Timann, Christian; Lemke, Arne-Jörn: CT-based calices segmentation (in DICOM format) of cold-water coral colony samples and spreadsheet containing the directed edges of the colony skeleton graph [dataset bundled publication]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.969578 (dataset in review)
Abstract:
Lophelia pertusa colony sample SaM-ID43148 was retrieved during Meteor cruise M70-1 with the ROV MARUM-Quest from the Gondola Slide, southeast of the Gargano Promontory in the Adriatic Sea. The spreadsheet contains the (directed) edges of the colony skeleton graph based on the calices segmentation dataset in https://doi.org/10.1594/PANGAEA.947300. Each label in SaM-ID43148_calices represents a vertex in this graph. The edges are given by their start label Node ID #1 and the label of their target Node ID #2.
Keyword(s):
Related to:
Schmitt, Kira; Titschack, Jürgen; Baum, Daniel (preprint): CoDA: Interactive Segmentation and Morphological Analysis of Dendroid Structures Exemplified on Stony Cold-Water Corals. arXiv, https://doi.org/10.48550/ARXIV.2406.18236
Further details:
Titschack, Jürgen; Schmitt, Kira; Baum, Daniel; Sanna, Giovanni; Freiwald, André; Timann, Christian; Lemke, Arne-Jörn (2022): CT raw data and polyp-cavity segmentation (both DICOM format) of Lophelia pertusa colony fragment SaM_ID43148 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.947300
Funding:
German Research Foundation (DFG), grant/award no. Ba5042/6-1; Ti706/6-1; project 490665120: CTcoral – CyberTaxonomische Klassifizierung und morphologische Charakterisierung von Kaltwasserkorallen
Coverage:
Median Latitude: 41.722807 * Median Longitude: 17.052385 * South-bound Latitude: 41.719670 * West-bound Longitude: 17.046330 * North-bound Latitude: 41.725170 * East-bound Longitude: 17.060830
Date/Time Start: 2006-10-15T07:11:00 * Date/Time End: 2006-10-15T07:11:00
Minimum Elevation: -714.0 m * Maximum Elevation: -674.0 m
Event(s):
M70/1_752 (GS: M70/1-752 (D 111)) * Latitude Start: 41.725170 * Longitude Start: 17.046330 * Latitude End: 41.719670 * Longitude End: 17.060830 * Date/Time: 2006-10-15T07:11:00 * Elevation Start: -674.0 m * Elevation End: -710.0 m * Location: Mediterranean Sea * Campaign: M70/1 * Basis: Meteor (1986) * Method/Device: Remote operated vehicle (ROV) * Comment: GeoB11207
SaM-ID43148 * Latitude: 41.723580 * Longitude: 17.049996 * Elevation: -714.0 m * Campaign: M70/1 * Basis: Meteor (1986) * Comment: Lophelia pertusa colony sample SaM-ID43148 was retrieved during Meteor cruise M70/1 with the ROV MARUM-Quest from the Gondola Slide, southeast of the Gargano Promontory in the Adriatic Sea (Station M70/1-752, GeoB11207)
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Edge, start | Edge start | Titschack, Jürgen | Coral Dendroid structure Analyzer (CoDA) | Node ID #1 | |
| 2 | Edge, target | Edge target | Titschack, Jürgen | Coral Dendroid structure Analyzer (CoDA) | Node ID #2 |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3316 data points
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