Vanharanta, Mari; Santoro, Mariano; Villena-Alemany, Cristian; Piiparinen, Jonna; Grossart, Hans-Peter; Labrenz, Matthias; Piwosz, Kasia; Spilling, Kristian: Effect of decreasing inorganic N:P ratio on the plankton community - INN:PP [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.966040 (dataset in review)
Abstract:
The Baltic Sea has been affected by eutrophication for several decades with the result of a gradual increase of oxygen minimum zones at the sea floor and release of phosphate from sediments. This has generated a decreasing inorganic nitrogen:phosphorus (N:P) ratio and excess phosphate remaining after the spring bloom. In the present study, a 17-days experiment was performed on June 2021 at the Tvärminne Research Station (Gulf of Finland, Northern Baltic Sea) where the effects of the decreasing ratio of dissolved inorganic nitrogen and phosphorus on the planktonic community were investigated in 12 in-situ mesocosms. Temperature, dissolved oxygen concentration and salinity were determined in situ, whilst water samples were collected during the whole duration of the experiment using a Limnos sampler (Hydro-Bios, Kiel), transported to the laboratory and processed for measurements of dissolved inorganic, organic and particulate nutrients, extracellular enzymatic activities, bacterial production, bacterial abundance, pigments fluorescency and concentration, eukaryotic organisms and prokariotyc cell and filament counts. Dissolved inorganic nutrients (nitrate, nitrite, ammonium, phosphate and silica) were determined according to Grasshoff et al. (1999). Concentrations of dissolved organic carbon and total dissolved nitrogen were determined. Dissolved organic nitrogen (DON) was calculated as difference between total dissolved nitrogen and dissolved inorganic nitrogen. Total dissolved phosphorus concentration was determined according to Koistinen et al. (2017). Dissolved organic phosphorus was calculated as difference between total dissolved phosphorus and dissolved inorganic phosphorus. Concentrations of particulate organic carbon (POC) and particulate organic nitrogen (PON) were also determined. The concentration of particulate organic phosphorus (POP) was measured according to Solórzano & Sharp (1980) with slight modification by Koistinen et al. (2017). Particulate organic elemental ratios POC:PON:POP were calculated on a molar basis. Extracellular enzymatic activities were determined according to Baltar et al. (2016). Bacterial production was determined as thymidine and leucine incorporations according to Fuhrman and Azam (1982), Smith and Azam (1992) and Kirchman et al. (1985). Chlorophyll-a was extracted from biomass according to Jespersen and Christoffersen (1987). Chlorophyll-a and Phycocyanin relative fluorescences were also measured. Filamentous cyanobacterial counts were determined after being stained with DAPI (4′,6-diamidino-2-phenylindole) and counted using epifluorescence microscopy according to Andersen and Throndsen (1995). Picocyanobacterial and heterotrophic bacterial counts were determined according to Gasol and Del Giorgio (2000). Aerobic anoxygenic phototrophic bacteria were determined using epifluorescence microscopy with infrared emission method (Piwosz et al. 2022). Picoeukaryotes counts were determined via flow cytometry. Counts of adults, nauplii and egg sacks of Copepoda, Amphibalanus sp. and larvae, Evadne sp., Podon sp., Bosmina sp., Synchaeta sp. and Keratella quadrata were manually identified via images created using a flatbed scanner.
Keyword(s):
Supplement to:
Spilling, Kristian; Vanharanta, Mari; Santoro, Mariano; Villena-Alemany, Cristian; Labrenz, Matthias; Grossart, Hans-Peter; Piwosz, Kasia (in review): Effects of excess phosphate on a coastal plankton community. bioRxiv, https://doi.org/10.1101/2024.02.05.576994
Vanharanta, Mari; Santoro, Mariano; Villena-Alemany, Cristian; Piiparinen, Jonna; Piwosz, Kasia; Grossart, Hans-Peter; Labrenz, Matthias; Spilling, Kristian (2024): Microbial remineralization processes during postspring-bloom with excess phosphate available in the northern Baltic Sea. FEMS Microbiology Ecology, 100(8), fiae103, https://doi.org/10.1093/femsec/fiae103
Vanharanta, Mari; Santoro, Mariano; Villena-Alemany, Cristian; Piiparinen, Jonna; Piwosz, Kasia; Grossart, Hans-Peter; Labrenz, Matthias; Spilling, Kristian (in review): Microbial remineralization processes during post-spring-bloom excess phosphate in the northern Baltic Sea. bioRxiv, https://doi.org/10.1101/2024.02.02.577174
References:
Andersen, Per; Throndsen, Jahn (2004): Estimating cell numbers. In: Hallegraeff, K, Anderson, DM, Cembella, AD (eds.) Manual on harmful marine microalgae. Monographs on oceanographic methodology no. 11, UNESCO, Paris, 99-129, https://unesdoc.unesco.org/ark:/48223/pf0000131711
Baltar, Federico; Legrand, Catherine; Pinhassi, Jarone (2016): Cell-free extracellular enzymatic activity is linked to seasonal temperature changes: a case study in the Baltic Sea. Biogeosciences, 13(9), 2815-2821, https://doi.org/10.5194/bg-13-2815-2016
Fuhrman, J A; Azam, Farooq (1982): Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: Evaluation and field results. Marine Biology, 66, 109-120, https://doi.org/10.1007/BF00397184
Gasol, Josep M; Del Giorgio, Paul A (2000): Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities. Scientia Marina, 64(2), 197-224, https://doi.org/10.3989/scimar.2000.64n2197
Grasshoff, Klaus; Kremling, Klaus; Ehrhardt, M (2009): Methods of Seawater Analysis, 3rd Completely Revised and Enlarged Edition. 632 pp
Jespersen, A-M; Christoffersen, Kirsten Seestern (1987): Measurements of chlorophyll-a from phytoplankton using ethanol as extraction solvent. Archiv für Hydrobiologie, 109(3), 445-454, https://doi.org/10.1127/archiv-hydrobiol/109/1987/445
Kirchman, David L; K'nees, E; Hodson, Robert E (1985): Leucine incorporation and its potential as a measure of protein synthesis by bacteria in natural aquatic systems. Applied and Environmental Microbiology, 49(3), 599-607, https://doi.org/10.1128/aem.49.3.599-607.1985
Koistinen, Jaana; Sjöblom, Mervi; Spilling, Kristian (2017): Determining Inorganic and Organic Phosphorus. In: Spilling, K (eds.), Biofuels from Algae, Methods in Molecular Biology, 1980, Springer New York, New York, NY, 87-94, https://doi.org/10.1007/7651_2017_104
Piwosz, Kasia; Villena-Alemany, Cristian; Mujakić, Izabela (2022): Photoheterotrophy by aerobic anoxygenic bacteria modulates carbon fluxes in a freshwater lake. The ISME Journal, 16(4), 1046-1054, https://doi.org/10.1038/s41396-021-01142-2
Smith, David Charles; Azam, Farooq (1992): A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine. Marine Microbial Food Webs, 6(2), 107-114
Solórzano, Lucia; Sharp, Jonathan H (1980): Determination of total dissolved phosphorus and particulate phosphorus in natural waters¹. Limnology and Oceanography, 25(4), 754-758, https://doi.org/10.4319/lo.1980.25.4.0754
Project(s):
Funding:
Horizon 2020 (H2020), grant/award no. 731065: Network of Leading European AQUAtic MesoCOSM Facilities Connecting Mountains to Oceans from the Arctic to the Mediterranean
Coverage:
Latitude: 59.843611 * Longitude: 23.251667
Date/Time Start: 2021-06-07T08:30:00 * Date/Time End: 2021-06-23T08:30:00
Minimum DEPTH, water, experiment: 1.5 m * Maximum DEPTH, water, experiment: 1.5 m
Event(s):
Tvärminne_mesocosm * Latitude: 59.843611 * Longitude: 23.251667 * Date/Time Start: 2021-06-07T08:30:00 * Date/Time End: 2021-06-23T08:30:00 * Elevation: 0.0 m * Location: Tvärminne Zoological Station, Finnland * Method/Device: Mesocosm experiment (MESO)
Parameter(s):
# | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
---|---|---|---|---|---|---|
1 | Event label | Event | Spilling, Kristian | |||
2 | Latitude of event | Latitude | Spilling, Kristian | |||
3 | Longitude of event | Longitude | Spilling, Kristian | |||
4 | Type of study | Study type | Spilling, Kristian | |||
5 | DATE/TIME | Date/Time | Spilling, Kristian | Geocode | ||
6 | Day of experiment | DOE | day | Spilling, Kristian | ||
7 | Mesocosm label | Meso label | Spilling, Kristian | |||
8 | Experimental treatment | Exp treat | Spilling, Kristian | |||
9 | DEPTH, water, experiment | Depth water exp | m | Spilling, Kristian | LIMNOS water sampler (LIMNOSWS) | Geocode |
10 | Temperature, water | Temp | °C | Spilling, Kristian | Optical dissolved oxygen, conductivity, temperature probe, YSI , ProSolo ODO/CT | In situ measurement |
11 | Oxygen, dissolved | DO | mg/l | Spilling, Kristian | Dissolved oxygen data logger, HOBO, U26-001 | In situ measurement |
12 | Salinity | Sal | Spilling, Kristian | Dissolved oxygen data logger, HOBO, U26-001 | In situ measurement | |
13 | Ammonium | [NH4]+ | µmol/l | Spilling, Kristian | Spectrophotometer, Hitachi, U-1100 | |
14 | Nitrite | [NO2]- | µmol/l | Spilling, Kristian | Autoanalyser (Thermo Scientific Aquakem 250) | |
15 | Nitrate | [NO3]- | µmol/l | Spilling, Kristian | Autoanalyser (Thermo Scientific Aquakem 250) | |
16 | Phosphate | [PO4]3- | µmol/l | Spilling, Kristian | Autoanalyser (Thermo Scientific Aquakem 250) | |
17 | Silicate | Si(OH)4 | mmol/l | Spilling, Kristian | Autoanalyser (Thermo Scientific Aquakem 250) | Dissolved silicate |
18 | Carbon, organic, dissolved | DOC | mg/l | Spilling, Kristian | Total organic carbon analyzer (TOC-VCPH), Shimadzu | |
19 | Nitrogen, organic, dissolved | DON | µmol/l | Spilling, Kristian | Calculated as difference between total dissolved nitrogen and dissolved inorganic nitrogen | |
20 | Phosphorus, organic, dissolved | DOP | µmol/l | Spilling, Kristian | Calculated as difference between total dissolved phosphorus and inorganic phosphorus | |
21 | Carbon, organic, particulate | POC | µmol/l | Spilling, Kristian | CHN elemental analyzer; coupled with Mass spectrometer, Europa Scientific ANCA-MS 20-20 15N/13C | |
22 | Nitrogen, organic, particulate | PON | µmol/l | Spilling, Kristian | CHN elemental analyzer; coupled with Mass spectrometer, Europa Scientific ANCA-MS 20-20 15N/13C | |
23 | Phosphorus, organic, particulate | POP | µmol/l | Spilling, Kristian | Determined according to Solórzano and Sharp (1980) modified by Koistinen et al. (2017) | |
24 | Alkaline phosphatase activity | ALKP A | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Cell free activity |
25 | Alkaline phosphatase activity | ALKP A | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of free living bacteria |
26 | Alkaline phosphatase activity | ALKP A | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of particle attached bacteria |
27 | Leucine aminopeptidase activity | Leu aminopep | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Cell free activity |
28 | Leucine aminopeptidase activity | Leu aminopep | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of free living bacteria |
29 | Leucine aminopeptidase activity | Leu aminopep | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of particle attached bacteria |
30 | alpha-glucosidase activity | MUF-aglu | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Cell free activity |
31 | alpha-glucosidase activity | MUF-aglu | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of free living bacteria |
32 | alpha-glucosidase activity | MUF-aglu | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of particle attached bacteria |
33 | beta-glucosidase activity | MUF-bglu | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Cell free activity |
34 | beta-glucosidase activity | MUF-bglu | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of free living bacteria |
35 | beta-glucosidase activity | MUF-bglu | nmol/l/h | Spilling, Kristian | Fluorescence Spectrometer, Agilent Technologies, Cary Eclipse | Of particle attached bacteria |
36 | Bacterial production of carbon, thymidine uptake rate | BP dThd upt rate | µmol/l/h | Spilling, Kristian | Liquid scintillation counter, PerkinElmer, Wallac 1414 WinSpectral | Thymidine incorporation |
37 | Bacterial production of carbon, leucine uptake rate | BP Leu upt rate | µmol/l/h | Spilling, Kristian | Liquid scintillation counter, PerkinElmer, Wallac 1414 WinSpectral | Leucine incorporation |
38 | Chlorophyll a, total | TChl a | µg/l | Spilling, Kristian | Spectrophotometer, Varian Cary Eclipse, Agilent Technologies Inc., Santa Clara, CA, USA | Extracted |
39 | Chlorophyll a | Chl a | RFU | Spilling, Kristian | Fluorometer (hand-held), Photon Systems Instruments, AquaPen handheld (PSI AquaPen) | Fluorescence [relative fluorescence units] |
40 | Phycocyanin | Phycoc | RFU | Spilling, Kristian | Fluorometer (hand-held), Photon Systems Instruments, AquaPen handheld (PSI AquaPen) | Fluorescence [relative fluorescence units] |
41 | Aphanizomenon sp. | Aphanizomenon sp. | #/l | Spilling, Kristian | Microscope, Carl Zeiss, Axioskop 2 plus; coupled with fluorescence lamp, Carl Zeiss, HBO100 | No. of filaments |
42 | Anabaena/Pseudoanabaena sp. | Anabaena/Pseudoanabaena sp. | #/l | Spilling, Kristian | Microscope, Carl Zeiss, Axioskop 2 plus; coupled with fluorescence lamp, Carl Zeiss, HBO100 | No. of filaments |
43 | Limnothrix/Planktothrix sp. | Limnothrix/Planktothrix sp. | #/l | Spilling, Kristian | Microscope, Carl Zeiss, Axioskop 2 plus; coupled with fluorescence lamp, Carl Zeiss, HBO100 | No. of filaments |
44 | Bacteria, heterotrophic | HBA | 106 #/ml | Spilling, Kristian | Flow Cytometer, BD Biosciences, LSR II | No. of cells |
45 | Picocyanobacteria | Picocyanobacteria | #/ml | Spilling, Kristian | Flow Cytometer, BD Biosciences, LSR II | No. of cells |
46 | Bacteria, aerobic, anoxygenic, phototrophic | AAPB | #/ml | Spilling, Kristian | Microscope, Carl Zeiss, Axio Imager.D2; coupled with Collibri LED module illumination system, Carl Zeiss | No. of cells |
47 | Nanoflagellates, heterotrophic | HNF | #/ml | Spilling, Kristian | Stereo Microscope, Leica, M125; coupled with integrated camera and fluorescence capability | No. of cells |
48 | Nanoflagellates, phototrophic | PNF | #/ml | Spilling, Kristian | Stereo Microscope, Leica, M125; coupled with integrated camera and fluorescence capability | No. of cells |
49 | Picoeukaryotes | PEuk | #/ml | Spilling, Kristian | Flow cytometer, Sysmex Partec, CyFlow Cube 8; coupled with two lasers 126, two scattering (forward and side) and three fluorescence detectors | No. of cells |
50 | Copepoda, adult | Copepoda ad | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
51 | Copepoda, nauplii | Copepoda naup | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
52 | Copepoda, egg sac | Copepoda egg sac | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
53 | Amphibalanus | Amphibalanus | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
54 | Amphibalanus, larvae | Amphibalanus larv | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
55 | Evadne sp. | Evadne sp. | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
56 | Podon sp. | Podon sp. | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
57 | Bosmina sp. | Bosmina sp. | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
58 | Bivalvia | Bivalvia | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
59 | Synchaeta sp. | Synchaeta sp. | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
60 | Keratella quadrata | K. quadrata | #/l | Spilling, Kristian | Counting, visual | Images created using a flatbed scanner |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
5671 data points
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