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Cattano, Carlo; Agostini, Sylvain; Harvey, Ben P; Wada, Shigeki; Quattrocchi, Federico; Turco, Gabriele; Inaba, Kazuo; Hall-Spencer, Jason M; Milazzo, Marco (2020): Seawater carbonate chemistry and fish communities properties off CO2 seeps in Japan [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.922738

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Abstract:
Ocean acidification will likely change the structure and function of coastal marine ecosystems over coming decades. Volcanic carbon dioxide seeps generate dissolved CO2 and pH gradients that provide realistic insights into the direction and magnitude of these changes. Here, we used fish and benthic community surveys to assess the spatio-temporal dynamics of fish community properties off CO2 seeps in Japan. Adding to previous evidence from ocean acidification ecosystem studies conducted elsewhere, our findings documented shifts from calcified to non-calcified habitats with reduced benthic complexity. In addition, we found that such habitat transition led to decreased diversity of associated fish and to selection of those fish species better adapted to simplified ecosystems dominated by algae. Our data suggest that near-future projected ocean acidification levels will oppose the ongoing range expansion of coral reef-associated fish due to global warming.
Keyword(s):
Benthos; CO2 vent; Coast and continental shelf; Community composition and diversity; Entire community; Field observation; North Pacific; Pelagos; Rocky-shore community; Temperate
Supplement to:
Cattano, Carlo; Agostini, Sylvain; Harvey, Ben P; Wada, Shigeki; Quattrocchi, Federico; Turco, Gabriele; Inaba, Kazuo; Hall-Spencer, Jason M; Milazzo, Marco (2020): Changes in fish communities due to benthic habitat shifts under ocean acidification conditions. Science of the Total Environment, 725, 138501, https://doi.org/10.1016/j.scitotenv.2020.138501
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Coverage:
Latitude: 34.319170 * Longitude: 139.205000
Event(s):
Shikine * Latitude: 34.319170 * Longitude: 139.205000 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-07-07.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeCattano, Carlostudy
2TypeTypeCattano, Carlo
3SeasonSeasonCattano, Carlo
4LocationLocationCattano, Carlo
5SiteSiteCattano, Carlo
6Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCattano, Carlomin
7Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCattano, Carlomax
8TransectTransectCattano, CarloBenthic
9Canopy heightCanopy hcmCattano, Carlo
10Canopy height, standard deviationCanopy h std dev±Cattano, Carlo
11Biotic Habitat Profile ratioBHPCattano, Carlo
12Biotic Habitat Profile ratio, standard deviationBHP std dev±Cattano, Carlo
13CoverageCov%Cattano, CarloTurf
14Coverage, standard deviationCov std dev±Cattano, CarloTurf
15CoverageCov%Cattano, CarloCCA
16Coverage, standard deviationCov std dev±Cattano, CarloCCA
17CoverageCov%Cattano, CarloNonCanopy
18Coverage, standard deviationCov std dev±Cattano, CarloNonCanopy
19CoverageCov%Cattano, CarloCanopy
20Coverage, standard deviationCov std dev±Cattano, CarloCanopy
21CoverageCov%Cattano, CarloCaulerpa
22Coverage, standard deviationCov std dev±Cattano, CarloCaulerpa
23CoverageCov%Cattano, CarloTable Corals
24Coverage, standard deviationCov std dev±Cattano, CarloTable Corals
25CoverageCov%Cattano, CarloSoft Corals
26Coverage, standard deviationCov std dev±Cattano, CarloSoft Corals
27CoverageCov%Cattano, CarloEncrusting Corals
28Coverage, standard deviationCov std dev±Cattano, CarloEncrusting Corals
29CoverageCov%Cattano, CarloMassive Corals
30Coverage, standard deviationCov std dev±Cattano, CarloMassive Corals
31CoverageCov%Cattano, CarloAnemone
32Coverage, standard deviationCov std dev±Cattano, CarloAnemone
33CoverageCov%Cattano, CarloOther
34Coverage, standard deviationCov std dev±Cattano, CarloOther
35TransectTransectCattano, CarloFish
36Species richnessSCattano, Carlo
37Species richness, standard deviationS std dev±Cattano, Carlo
38FishFish#Cattano, Carlo
39Fish, standard deviationFish std dev±Cattano, Carlo
40Species richnessSCattano, CarloTropical
41Species richness, standard deviationS std dev±Cattano, CarloTropical
42Species richnessSCattano, CarloTemperate
43Species richness, standard deviationS std dev±Cattano, CarloTemperate
44Species richnessSCattano, CarloSub-Tropical
45Species richness, standard deviationS std dev±Cattano, CarloSub-Tropical
46FishFish#Cattano, CarloCarnivore
47Fish, standard deviationFish std dev±Cattano, CarloCarnivore
48FishFish#Cattano, CarloHerbivore
49Fish, standard deviationFish std dev±Cattano, CarloHerbivore
50FishFish#Cattano, CarloOmnivore
51Fish, standard deviationFish std dev±Cattano, CarloOmnivore
52FishFish#Cattano, CarloPlanktivore
53Fish, standard deviationFish std dev±Cattano, CarloPlanktivore
54FishFish#Cattano, CarloCoral Associated Fish
55Fish, standard deviationFish std dev±Cattano, CarloCoral Associated Fish
56SalinitySalCattano, Carlo
57Salinity, standard deviationSal std dev±Cattano, Carlo
58Temperature, waterTemp°CCattano, Carlo
59Temperature, water, standard deviationTemp std dev±Cattano, Carlo
60pHpHCattano, CarloPotentiometricNBS scale
61pH, standard deviationpH std dev±Cattano, CarloPotentiometricNBS scale
62ReplicatesRepl#Cattano, Carlo
63Alkalinity, totalATµmol/kgCattano, CarloPotentiometric titration
64Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCattano, CarloCalculated using CO2SYS
65Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Cattano, CarloCalculated using CO2SYS
66Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCattano, Carlo
67Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Cattano, Carlo
68ReplicatesRepl#Cattano, Carlo
69Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
70pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
71Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
72Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
73Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
74Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
75Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
76Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
77Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
78Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
892 data points

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