Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.835969, Supplement to: Collard, M et al. (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614, https://doi.org/10.1007/s11356-014-3259-z

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX Citation

Abstract:
Sea cucumbers are dominant invertebrates in several ecosystems such as coral reefs, seagrass meadows and mangroves. As bioturbators, they have an important ecological role in making available calcium carbonate and nutrients to the rest of the community. However, due to their commercial value, they face overexploitation in the natural environment. On top of that, occurring ocean acidification could impact these organisms, considered sensitive as echinoderms are osmoconformers, high-magnesium calcite producers and have a low metabolism. As a first investigation of the impact of ocean acidification on sea cucumbers, we tested the impact of short-term (6 to 12 days) exposure to ocean acidification (seawater pH 7.7 and 7.4) on two sea cucumbers collected in SW Madagascar, Holothuria scabra, a high commercial value species living in the seagrass meadows, and H. parva, inhabiting the mangroves. The former lives in a habitat with moderate fluctuations of seawater chemistry (driven by day-night differences) while the second lives in a highly variable intertidal environment. In both species, pH of the coelomic fluid was significantly negatively affected by reduced seawater pH, with a pronounced extracellular acidosis in individuals maintained at pH 7.7 and 7.4. This acidosis was due to an increased dissolved inorganic carbon content and pCO2 of the coelomic fluid, indicating a limited diffusion of the CO2 towards the external medium. However, respiration and ammonium excretion rates were not affected. No evidence of accumulation of bicarbonate was observed to buffer the coelomic fluid pH. If this acidosis stays uncompensated for when facing long-term exposure, other processes could be affected in both species, eventually leading to impacts on their ecological role.
Keyword(s):
Acid-base regulation; Animalia; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Echinodermata; Holothuria parva; Holothuria scabra; Indian Ocean; Laboratory experiment; Other metabolic rates; Respiration; Single species; Tropical
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0 [webpage]. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-15.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1SpeciesSpeciesCollard, Marie
2pHpHCollard, Marienominal, total scale
3Aquarium numberAquariumCollard, Marie
4Duration, number of daysDurationdaysCollard, Marieexposure
5Coelomic fluid, pHpH (cf)Collard, MariePotentiometrictotal scale
6pHpHCollard, MariePotentiometrictotal scale, seawater
7DifferenceDiffCollard, MarieCalculatedpH, total scale
8Coelomic fluid, alkalinityAT (cf)µmol/kgCollard, MariePotentiometric titration
9Alkalinity, totalATµmol/kgCollard, MariePotentiometric titrationseawater
10DifferenceDiffCollard, MarieCalculatedalkalinity, total
11Coelomic fluid, carbon, inorganic, dissolvedDIC (cf)mmol/lCollard, MarieIsotope ratio mass spectrometry
12Carbon, inorganic, dissolvedDICmmol/lCollard, MarieIsotope ratio mass spectrometryseawater
13DifferenceDiffCollard, MarieCalculatedcarbon, inorganic, dissolved
14δ13C, Coelomic fluidδ13C (cf)‰ PDBCollard, MarieIsotope ratio mass spectrometry
15δ13Cδ13C‰ PDBCollard, MarieIsotope ratio mass spectrometryseawater
16Respiration rate, oxygenResp O2µmol/g/hCollard, Marie
17Ammonium, excretion[NH4]+ excµmol/g/hCollard, Marie
18Temperature, waterTemp°CCollard, Marie
19SalinitySalCollard, Marie
20Carbon, inorganic, dissolvedDICµmol/kgCollard, MarieIsotope ratio mass spectrometry
21Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCollard, MarieCalculated using CO2SYS
22Carbon dioxideCO2µmol/kgCollard, MarieCalculated using CO2SYS
23Bicarbonate ion[HCO3]-µmol/kgCollard, MarieCalculated using CO2SYS
24Carbonate ion[CO3]2-µmol/kgCollard, MarieCalculated using CO2SYS
25Calcite saturation stateOmega CalCollard, MarieCalculated using CO2SYS
26Aragonite saturation stateOmega ArgCollard, MarieCalculated using CO2SYS
27Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3186 data points

Download Data

Download dataset as tab-delimited text — use the following character encoding:

View dataset as HTML (shows only first 2000 rows)