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Shaw, Emily; Tilbrook, Bronte; Steven, Andrew D L; Phinn, Stuart R (2014): Carbonate chemistry, community metabolism, PAR, temperature and salinity of One Tree Island reef [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.835109, Supplement to: Shaw, Emily; Phinn, Stuart R; Tilbrook, Bronte; Steven, Andrew D L (2015): Natural in situ relationships suggest coral reef calcium carbonate production will decline with ocean acidification. Limnology and Oceanography, https://doi.org/10.1002/lno.10048

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Abstract:
There are few in situ studies showing how net community calcification (Gnet) of coral reefs is related to carbonate chemistry, and the studies to date have demonstrated different predicted rates of change. In this study, we measured net community production (Pnet), Gnet, and carbonate chemistry of a reef flat at One Tree Island, Great Barrier Reef. Diurnal pCO2 variability of 289-724 µatm was driven primarily by photosynthesis and respiration. The reef flat was found to be net autotrophic, with daily production of ~ 35 mmol C/m**2/d and net calcification of ~ 33 mmol C/m**2/d . Gnet was strongly related to Pnet, which drove a hysteresis pattern in the relationship between Gnet and aragonite saturation state (Omega ar). Although Pnet was the main driver of Gnet, Omega ar was still an important factor, where 95% of the variance in Gnet could be described by Pnet and Omega ar. Based on the observed in situ relationship, Gnet would be expected to reach zero when Omega ar is 2.5. It is unknown what proportion of a decline in Gnet would be through reduced calcification and what would occur through increased dissolution, but the results here support predictions that overall calcium carbonate production will decline in coral reefs as a result of ocean acidification.
Keyword(s):
Benthos; Calcification/Dissolution; Coast and continental shelf; Entire community; Field observation; Primary production/Photosynthesis; Rocky-shore community; South Pacific; Temperate
Related to:
Shaw, Emily; Phinn, Stuart R; Tilbrook, Bronte; Steven, Andrew D L (2014): Comparability of Slack Water and Lagrangian Flow Respirometry Methods for Community Metabolic Measurements. PLoS ONE, 9(11), e112161, https://doi.org/10.1371/journal.pone.0112161.s001
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0 [webpage]. https://cran.r-project.org/package=seacarb
Coverage:
Median Latitude: -23.507540 * Median Longitude: 152.089334 * South-bound Latitude: -23.510100 * West-bound Longitude: 152.039500 * North-bound Latitude: -23.477800 * East-bound Longitude: 152.091900
Date/Time Start: 2013-11-08T17:28:00 * Date/Time End: 2013-11-22T13:56:00
Minimum DEPTH, water: 0.50 m * Maximum DEPTH, water: 1.60 m
Event(s):
One_Tree_Island * Latitude: -23.507500 * Longitude: 152.089300 * Date/Time Start: 2013-11-08T00:00:00 * Date/Time End: 2013-11-22T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-08-21.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1SiteSiteShaw, Emily
2DATE/TIMEDate/TimeGeocode
3DateDateShaw, EmilyUTC
4LATITUDELatitudeGeocode
5LONGITUDELongitudeGeocode
6DEPTH, waterDepth watermGeocode
7Temperature, waterTemp°CShaw, Emilymeasured in situ
8SalinitySalShaw, Emilymeasured in situ
9IrradianceEµmol/m2/sShaw, Emilymeasured in situ
10Alkalinity, totalATµmol/kgShaw, Emilymeasured from discrete water samples
11Carbon, inorganic, dissolvedDICµmol/kgShaw, Emilymeasured from discrete water samples
12Alkalinity, totalATµmol/kgShaw, Emilysalinity-normalized (S=35)
13Carbon, inorganic, dissolvedDICµmol/kgShaw, Emilysalinity-normalized (S=35)
14pHpHShaw, EmilyCalculated using CO2SYStotal scale
15Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmShaw, EmilyCalculated using CO2SYS
16Aragonite saturation stateOmega ArgShaw, EmilyCalculated using CO2SYS
17Net calcification rate of calcium carbonateNC CaCO3µmol/cm2/hShaw, EmilyCalculatedcalculated from changes in TA and DIC of consecutive samples
18Net photosynthesis rate, carbon dioxidePN CO2µmol/cm2/hShaw, Emilycalculated from changes in TA and DIC of consecutive samples
19Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
21Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1810 data points

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