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DeCarlo, Thomas M; Cohen, Anne L; Wong, George T F; Shiah, Fuh Kwo; Lentz, S J; Davis, Kristen A; Shamberger, K E F; Lohmann, Pat (2017): Seawater carbonate chemistry and ecosystem calcification, community production of coral reef [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.875891, Supplement to: DeCarlo, TM et al. (2017): Community production modulates coral reef pH and the sensitivity of ecosystem calcification to ocean acidification. Journal of Geophysical Research: Oceans, 122, 745–761, https://doi.org/10.1002/2016JC012326

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Abstract:
Coral reefs are built of calcium carbonate (CaCO3) produced biogenically by a diversity of calcifying plants, animals and microbes. As the ocean warms and acidifies, there is mounting concern that declining calcification rates could shift coral reef CaCO3 budgets from net accretion to net dissolution. We quantified net ecosystem calcification (NEC) and production (NEP) on Dongsha Atoll, northern South China Sea, over a two-week period that included a transient bleaching event. Peak daytime pH on the wide, shallow reef flat during the non-bleaching period was 8.5, significantly elevated above that of the surrounding open ocean (8.0-8.1) as a consequence of daytime NEP (up to 112 mmol C/m**2/h). Diurnal-averaged NEC was 390?+/-?90 mmol CaCO3/m**2/day, higher than any other coral reef studied to date despite comparable calcifier cover (25%) and relatively high fleshy algal cover (19%). Coral bleaching linked to elevated temperatures significantly reduced daytime NEP by 29 mmol C/m**2/h. pH on the reef flat declined by 0.2 units, causing a 40% reduction in NEC in the absence of pH changes in the surrounding open ocean. Our findings highlight the interactive relationship between carbonate chemistry of coral reef ecosystems and ecosystem production and calcification rates, which are in turn impacted by ocean warming. As open-ocean waters bathing coral reefs warm and acidify over the 21st century, the health and composition of reef benthic communities will play a major role in determining on-reef conditions that will in turn dictate the ecosystem response to climate change.
Keyword(s):
Benthos; Calcification/Dissolution; Coast and continental shelf; Entire community; Field observation; North Pacific; Primary production/Photosynthesis; Rocky-shore community; Tropical
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 20.800000 * Longitude: 116.700000
Date/Time Start: 2014-06-03T00:00:00 * Date/Time End: 2014-06-14T00:00:00
Minimum DEPTH, water: 0.65 m * Maximum DEPTH, water: 1.74 m
Event(s):
Dongsha_Atoll * Latitude: 20.800000 * Longitude: 116.700000 * Date/Time Start: 2014-06-03T00:00:00 * Date/Time End: 2014-06-14T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-06-05.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeDeCarlo, Thomas Mtype
2Sampling dateSampling dateDeCarlo, Thomas MRAS sample time
3Time in hoursTimehDeCarlo, Thomas MResidence time
4Time, standard deviationTime std devDeCarlo, Thomas MResidence time
5SalinitySalDeCarlo, Thomas M
6Temperature, waterTemp°CDeCarlo, Thomas M
7IrradianceEµmol/m2/sDeCarlo, Thomas M
8DensityDensityg/cm3DeCarlo, Thomas M
9DEPTH, waterDepth watermDeCarlo, Thomas MGeocode
10Alkalinity, totalATµmol/kgDeCarlo, Thomas M
11Carbon, inorganic, dissolvedDICµmol/kgDeCarlo, Thomas M
12Carbon dioxide, air-sea, fluxCO2 air-sea fluxmmol/m2/hDeCarlo, Thomas M
13Net calcification rate of calcium carbonateNC CaCO3mmol/m2/hDeCarlo, Thomas M
14Calcification rate, standard deviationCalc rate std dev±DeCarlo, Thomas M
15Carbon, net productionNP Cmmol/m2/hDeCarlo, Thomas M
16Net community production, carbon dioxide, standard deviationNCP CO2 std dev±DeCarlo, Thomas M
17Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
18pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
19Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1440 data points

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