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Clark, Timothy D; Raby, Graham D; Roche, Dominique G; Binning, Sandra A; Speers-Roesch, Ben; Jutfelt, Fredrik; Sundin, Josefin (2020): Seawater carbonate chemistry and behaviour of coral reef fishes [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.918625

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Abstract:
The partial pressure of CO2 in the oceans has increased rapidly over the past century, driving ocean acidification and raising concern for the stability of marine ecosystems. Coral reef fishes are predicted to be especially susceptible to end-of-century ocean acidification on the basis of several high-profile papers that have reported profound behavioural and sensory impairments—for example, complete attraction to the chemical cues of predators under conditions of ocean acidification. Here, we comprehensively and transparently show that—in contrast to previous studies—end-of-century ocean acidification levels have negligible effects on important behaviours of coral reef fishes, such as the avoidance of chemical cues from predators, fish activity levels and behavioural lateralization (left–right turning preference). Using data simulations, we additionally show that the large effect sizes and small within-group variances that have been reported in several previous studies are highly improbable. Together, our findings indicate that the reported effects of ocean acidification on the behaviour of coral reef fishes are not reproducible, suggesting that behavioural perturbations will not be a major consequence for coral reef fishes in high CO2 oceans.
Keyword(s):
Acanthochromis polyacanthus; Animalia; Behaviour; Chordata; Chromis atripectoralis; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Dascyllus aruanus; Dischistodus perspicillatus; Laboratory experiment; Nekton; Pelagos; Pomacentrus amboinensis; Pomacentrus moluccensis; Pseudochromis fuscus; Single species; South Pacific; Tropical
Supplement to:
Clark, Timothy D; Raby, Graham D; Roche, Dominique G; Binning, Sandra A; Speers-Roesch, Ben; Jutfelt, Fredrik; Sundin, Josefin (2020): Ocean acidification does not impair the behaviour of coral reef fishes. Nature, 577(7790), 370-375, https://doi.org/10.1038/s41586-019-1903-y
Original version:
Clark, Timothy D; Raby, Graham D; Roche, Dominique G; Binning, Sandra A; Speers-Roesch, Ben; Jutfelt, Fredrik; Sundin, Josefin (2020): Ocean acidification does not impair the behaviour of coral reef fishes. figshare, https://doi.org/10.6084/m9.figshare.7871522
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Coverage:
Median Latitude: -16.745235 * Median Longitude: 146.554785 * South-bound Latitude: -18.823800 * West-bound Longitude: 145.466670 * North-bound Latitude: -14.666670 * East-bound Longitude: 147.642900
Event(s):
Davies_reef_OA * Latitude: -18.823800 * Longitude: 147.642900 * Method/Device: Experiment (EXP)
Lizard_Island_OA * Latitude: -14.666670 * Longitude: 145.466670 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-06-09.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventClark, Timothy D
2TypeTypeClark, Timothy Dstudy
3SpeciesSpeciesClark, Timothy D
4Registration number of speciesReg spec noClark, Timothy D
5Uniform resource locator/link to referenceURL refClark, Timothy DWoRMS Aphia ID
6LocationLocationClark, Timothy D
7TreatmentTreatClark, Timothy D
8CategoryCatClark, Timothy D
9IdentificationIDClark, Timothy Danimal
10NameNameClark, Timothy Dexperimenter
11Length, standardI stdmmClark, Timothy D
12SizeSizeClark, Timothy Dgrouping of the fish, separated at 15 mm standard length into 'big' or 'small'
13Time in secondsTimesClark, Timothy Dfish was active per minute, averaged across the duration of the trial
14CommentCommentClark, Timothy D
15TimeTime%Clark, Timothy Dthe fish spent in the side of the flume containing the predator chemical cue
16TimeTime%Clark, Timothy Dspent in the size of the choice flume containing predator chemical cue
17Time in daysTimedaysClark, Timothy Din elevated CO2 conditions
18Day of experimentDOEdayClark, Timothy Din experimental conditions (Control or CO2)
19IdentificationIDClark, Timothy Dtank
20IdentificationIDClark, Timothy Dfish
21Numbern#Clark, Timothy Dturns to the left (out of 10)
22Numbern#Clark, Timothy Dturns to the right (out of 10)
23Numbern#Clark, Timothy DMaximum number oif turns to one side (left OR right)
24Numbern#Clark, Timothy DTotal number of turns
25LateralizationLatClark, Timothy DRelative
26LateralizationLatClark, Timothy DAbsolute
27Numbern#Clark, Timothy DTrial
28ScoreScoreClark, Timothy DDid the fish turn right [1] or left [0] in the trial (i.e. row)
29ScoreScoreClark, Timothy DDid the fish turn right [1] or left [0] in the trial (i.e. row) when the barrier at one end of the detour test runway was offset
30SalinitySalClark, Timothy D
31Salinity, standard deviationSal std dev±Clark, Timothy D
32Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmClark, Timothy D
33Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Clark, Timothy D
34ReplicatesRepl#Clark, Timothy D
35Temperature, waterTemp°CClark, Timothy D
36Temperature, water, standard deviationTemp std dev±Clark, Timothy D
37ReplicatesRepl#Clark, Timothy D
38Alkalinity, totalATµmol/kgClark, Timothy D
39Alkalinity, total, standard deviationAT std dev±Clark, Timothy D
40ReplicatesRepl#Clark, Timothy D
41pHpHClark, Timothy Dtotal scale
42Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
44pH, standard deviationpH std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)total scale
45Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Carbon dioxide, standard deviationCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
47Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Fugacity of carbon dioxide in seawater, standard deviationfCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
49Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Bicarbonate ion, standard deviation[HCO3]- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
51Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52Carbonate ion, standard deviation[CO3]2- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
53Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
54Carbon, inorganic, dissolved, standard deviationDIC std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
55Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
56Aragonite saturation state, standard deviationOmega Arg std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
57Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
58Calcite saturation state, standard deviationOmega Cal std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
230403 data points

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