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Cohen-Rengifo, Mishal; Mazurais, David; Begout, Marie-Laure (2026): Seawater carbonate chemistry and the sensory behaviour of juvenile Dicentrarchus labrax in response to mechano-acoustic and visual predator cues under ocean warming and acidification [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.997289 (DOI registration in progress)

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Published: 2026-09-10

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Abstract:
We investigated whether mid-duration exposure to warming and/or acidification alters behavioural response to visual or mechano-acoustic predator cues in juvenile Dicentrarchus labrax. We measured kinematic variables before and after a visual or a mechano-acoustic challenge which mimicked an overflying bird shadow or a bird swoop attack, respectively. Due to large interindividual variability in responses before cue presentation, fish were categorized as slow and fast to account for baseline individual variability.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-09-08.
Keyword(s):
Animalia; Behaviour; Chordata; Containers and aquaria (20-1000 L or < 1 m**2); Dicentrarchus labrax; Laboratory experiment; Laboratory strains; Nekton; Not applicable; Ocean acidification; Pelagos; Single species; Temperature
Related to:
Cohen-Rengifo, Mishal; Mazurais, David; Bégout, Marie-Laure (2023): Response to visual and mechano-acoustic predator cues is robust to ocean warming and acidification and is highly variable in European sea bass. Frontiers in Marine Science, 10, 1108968, https://doi.org/10.3389/fmars.2023.1108968
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeCohen-Rengifo, Mishal
2Species, unique identificationSpecies UIDCohen-Rengifo, Mishal
3Species, unique identification (Semantic URI)Species UID (Semantic URI)Cohen-Rengifo, Mishal
4Species, unique identification (URI)Species UID (URI)Cohen-Rengifo, Mishal
5TreatmentTreatCohen-Rengifo, Mishal
6PeriodPeriodCohen-Rengifo, Mishal
7GroupGroupCohen-Rengifo, MishalRapidity
8ReplicatesRepl#Cohen-Rengifo, MishalVisual tests
9Cumulated distance travelled standardised by individual total body lengthDtotBLCohen-Rengifo, MishalVisual tests
10Cumulated distance travelled standardised by individual total body length, standard errorDtot std e±Cohen-Rengifo, MishalVisual tests
11Speed, swimmingSp swimBL/sCohen-Rengifo, MishalVisual tests
12Speed, swimming, standard errorSp swim std e±Cohen-Rengifo, MishalVisual tests
13ReplicatesRepl#Cohen-Rengifo, MishalMechano-Acoustic Test
14Cumulated distance travelled standardised by individual total body lengthDtotBLCohen-Rengifo, MishalMechano-Acoustic Test
15Cumulated distance travelled standardised by individual total body length, standard errorDtot std e±Cohen-Rengifo, MishalMechano-Acoustic Test
16Speed, swimmingSp swimBL/sCohen-Rengifo, MishalMechano-Acoustic Test
17Speed, swimming, standard errorSp swim std e±Cohen-Rengifo, MishalMechano-Acoustic Test
18SalinitySalCohen-Rengifo, Mishal
19Salinity, standard deviationSal std dev±Cohen-Rengifo, Mishal
20OxygenO%Cohen-Rengifo, Mishal
21Oxygen, standard deviationO2 std dev±Cohen-Rengifo, Mishal
22Temperature, waterTemp°CCohen-Rengifo, Mishal
23Temperature, water, standard deviationTemp std dev±Cohen-Rengifo, Mishal
24pH, NBS scalepH NBSCohen-Rengifo, Mishal
25pH, standard deviationpH std dev±Cohen-Rengifo, MishalNBS scale
26pH, total scalepHTCohen-Rengifo, Mishal
27pH, standard deviationpH std dev±Cohen-Rengifo, Mishaltotal scale
28Alkalinity, totalATµmol/kgCohen-Rengifo, Mishal
29Alkalinity, total, standard deviationAT std dev±Cohen-Rengifo, Mishal
30Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCohen-Rengifo, Mishal
31Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Cohen-Rengifo, Mishal
32Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
976 data points

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