Railo, Sohvi Kaarina; Heikkilä, Maija; Jääskeläinen, Sara; Rintala, Janne-Markus; Weckström, Kaarina: Sediment trap diatom counts from Tvärminne Archipelago, Gulf of Finland, Baltic Sea [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.995821 (dataset in review)
Abstract:
Diatom counts were analysed from sediment trap samples collected from Tvärminne Storfjärden, Gulf of Finland, Baltic Sea, between October 2012 and October 2013 as a part of Winter Ecology project. Automated cylindrical Hydrobios Multi sediment trap (aperture 0.0015 m²) was deployed at 15-meter water depth, approximately 15-m above sea floor. The rotation for the sediment trap was set to 7-day intervals, some samples were combined to represent 2-to-8-week intervals. Diatoms were counted and identified using a Zeiss Axio Imager.A2 light microscope, Plan-Apochromat 100×/1.4 oil immersion objective, phase contrast optics and a total magnification of ×1000.
Keyword(s):
References:
Enberg, Sara; Majaneva, Markus; Autio, Riitta; Blomster, Jaanika; Rintala, Janne-Markus (2018): Phases of microalgal succession in sea ice and the water column in the Baltic Sea from autumn to spring. Marine Ecology Progress Series, 599, 19-34, https://doi.org/10.3354/meps12645
Majaneva, Markus; Enberg, Sara; Autio, Riitta; Blomster, Jaanika; Rintala, Janne-Markus (2019): Mamiellophyceae shift in seasonal predominance in the Baltic Sea. Aquatic Microbial Ecology, 83(2), 181-187, https://doi.org/10.3354/ame01915
Majaneva, Markus; Jääskeläinen, Sara; Autio, Riitta; Blomster, Jaanika; Rintala, Janne-Markus (2024): Dynamics of cold-water dinoflagellates in the northern Baltic Sea based on 18S rRNA gene metabarcoding. Marine Biodiversity, 54(3), 51, https://doi.org/10.1007/s12526-024-01443-7
Project(s):
Winter Ecology (WE)
Coverage:
Latitude: 59.855817 * Longitude: 23.256850
Date/Time Start: 2012-10-08T00:00:00 * Date/Time End: 2013-10-14T00:00:00
Minimum DEPTH, water: 15 m * Maximum DEPTH, water: 15 m
Event(s):
Storfjarden_2012-2013_1 * Latitude: 59.855817 * Longitude: 23.256850 * Date/Time Start: 2012-10-08T00:00:00 * Date/Time End: 2012-11-05T00:00:00 * Elevation: -32.0 m * Location: Gulf of Finland * Method/Device: Multi Sediment Trap, Hydro-Bios Apparatebau GmbH
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Railo, Sohvi Kaarina | |||
| 2 | Latitude of event | Latitude | Railo, Sohvi Kaarina | |||
| 3 | Longitude of event | Longitude | Railo, Sohvi Kaarina | |||
| 4 | Elevation of event | Elevation | m | Railo, Sohvi Kaarina | ||
| 5 | Date/Time of event | Date/Time | Railo, Sohvi Kaarina | |||
| 6 | Date/Time of event 2 | Date/Time 2 | Railo, Sohvi Kaarina | |||
| 7 | DEPTH, water | Depth water | m | Railo, Sohvi Kaarina | Geocode | |
| 8 | Sample ID | Sample ID | Railo, Sohvi Kaarina | |||
| 9 | Achnanthes spp. | Achnanthes spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 10 | Actinocyclus octonarius | A. octonarius | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 11 | Amphora copulata | A. copulata | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 12 | Amphora pediculus | A. pediculus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 13 | Amphora spp. | Amphora spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 14 | Aulacoseira ambigua | A. ambigua | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 15 | Aulacoseira subarctica | A. subarctica | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 16 | Bacillaria paxillifer | B. paxilifer | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 17 | Berkeleya rutilans | B. rutilans | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 18 | Caloneis aemula | C. aemula | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 19 | Caloneis bacillum | C. bacillum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 20 | Caloneis spp. | Caloneis spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 21 | Catenula adhaerens | C. adhaerens | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 22 | cf. Stauronella | cf. Stauronella | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 23 | Chaetoceros spp. | Chaetoceros spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 24 | Chaetoceros spp., resting spores | Chaetoceros spp. rs | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 25 | Chamaepinnularia margaritiana | C. margaritiana | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 26 | Cocconeis neodiminuta | C. neodiminuta | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 27 | Cocconeis neothumensis | C. neothumensis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 28 | Cocconeis pediculus | C. pediculus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 29 | Cocconeis placentula | C. placentula | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 30 | Cocconeis scutellum | C. scutellum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 31 | Cocconeis spp. | Cocconeis spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 32 | Cocconeis nugalas | C. nugalas | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 33 | Conticribra guillardii | C. guillardii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 34 | Ctenophora pulchella | C. pulchella | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 35 | Cyclotella atomus | C. atomus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 36 | Cyclotella choctawhatcheeana | C. choctawhatcheeana | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 37 | Cyclotella spp. | Cyclotella spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 38 | Diatoma constricta | D. constricta | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 39 | Diatoma moniliformis | D. moniliformis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 40 | Diatoma tenuis | D. tenuis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 41 | Dimeregramma cf. hyalinum | D. cf. hyalinum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 42 | Epithemia adnata | E. adnata | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 43 | Epithemia sorex | E. sorex | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 44 | Epithemia turgida | E. turgida | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 45 | Fallacia clepsidroides | F. clepsidroides | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 46 | Fallacia cryptolyra | F. cryptolyra | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 47 | Fallacia spp. | Fallacia spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 48 | Fragilaria amicorum | F. amicorum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 49 | Fragilaria capucina | F. capucina | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 50 | Fragilaria cf. tenera | F. cf. tenera | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 51 | Fragilaria crotonensis | F. crotonensis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 52 | Fragilaria gedanensis | F. gedanensis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 53 | Fragilaria spp. | Fragilaria spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 54 | Fragilariaceae | Fragilariaceae | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 55 | Fragilariopsis cylindrus | F. cylindrus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 56 | Gomphonella olivacea | G. olivacea | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 57 | Gomphonema spp. | Gomphonema spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 58 | Gomphonemopsis exigua | G. exigua | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 59 | Gomphonemopsis pseudexigua | G. pseudexigua | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 60 | Gomphonemopsis platypus | G. platypus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 61 | Gomphonemopsis spp. | Gomphonemopsis spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 62 | Grammatophora marina | G. marina | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 63 | Gyrosigma attenuatum | G. attenuatum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 64 | Halamphora coffeiformis | H. coffeiformis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 65 | Halamphora holsatica | H. holsatica | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 66 | Hippodonta hungarica | H. hungarica | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 67 | Licmophora spp. | Licmophora spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 68 | Mastogloia cf. baltica | M. cf. baltica | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 69 | Mastogloia cf. pumila | M. cf. pumila | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 70 | Mastogloia exigua | M. exigua | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 71 | Melosira lineata | M. lineata | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 72 | Melosira moniliformis | M. moniliformis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 73 | Melosira nummuloides | M. nummuloides | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 74 | Melosira spp. | Melosira spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 75 | Minidiscus proschkinae | M. proschkinae | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 76 | Nanofrustulum cf. trainori | N. cf. trainori | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | Includes Staurosirella cf. pinnata |
| 77 | Navicula germanopolonica | N. germanopolonica | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 78 | Navicula gregaria | N. gregaria | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 79 | Navicula perminuta | N. perminuta | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 80 | Navicula spp. | Navicula spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 81 | Nitzschia frustulum | N. frustulum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 82 | Nitzschia inconspicua | N. inconspicua | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 83 | Nitzschia liebetruthii | N. liebetruthii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 84 | Nitzschia spp. | Nitzschia spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 85 | Opephora mutabilis | O. mutabilis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 86 | Pauliella taeniata | P. taeniata | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 87 | Pauliella taeniata, resting spore | P. taeniata rs | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 88 | Pinnularia spp. | Pinnularia spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 89 | Plagiotropis spp. | Plagiotropis spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 90 | Pseudofallacia tenera | P. tenera | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 91 | Pseudoplanothidium delicatulum | P. delicatulum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | Includes Achnanthes lemmermannii and Pseudoplanothidium engelbrechtii |
| 92 | Pseudostaurosiropsis geocollegarum | P. geocollegarum | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 93 | Rhoicosphenia abbreviata | R. abbreviata | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 94 | Rhopalodia gibba | R. gibba | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 95 | Shionodiscus oestrupii | S. oestrupii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 96 | Skeletonema marinoi | S. marinoi | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 97 | Stauroforma atomus | S. atomus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 98 | Stauroforma schulzii | S. schulzii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 99 | Stauroneis radissonii | S. radissonii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 100 | Stauroneis spp. | Stauroneis spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 101 | Stauroneis exiguiformis | S. exiguiformis | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 102 | Staurosira subsalina | S. subsalina | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 103 | Staurosirella martyi | S. martyi | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 104 | Stenoneis cf. wojtek-kowalskii | S. cf. wojtek-kowalskii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 105 | Stephanocyclus meneghinianus | S. meneghinianus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 106 | Stephanodiscus parvus | S. parvus | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 107 | Stephanodiscus spp. | Stephanodiscus spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 108 | Surirella brebissonii | S. brebissonii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 109 | Tabellaria flocculosa | T. flocculosa | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 110 | Tabularia fasciculata | T. fasciculata | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 111 | Tabularia tabulata | T. tabulata | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 112 | Tabularia waernii | T. waernii | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 113 | Thalassiosira baltica | T. baltica | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 114 | Thalassiosira hyperborea | T. hyperborea | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 115 | Thalassiosira levanderi | T. levanderi | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 116 | Thalassiosira spp. | Thalassiosira spp. | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 117 | Diatoms indeterminata | Diatoms indet | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | Under sediment |
| 118 | Diatoms, total | Diatoms tot | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | Excluding resting spores |
| 119 | Microspheres (counted) | Microspheres count | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 120 | Microspheres (added) | Microspheres add | # | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | |
| 121 | Aperture size | Aperture s | m2 | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | Sediment trap aperture |
| 122 | Mass | Mass | g | Railo, Sohvi Kaarina | Light microscope, Zeiss, Axio Imager.A2 | Sediment weight for diatom preparation |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2415 data points
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