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Zhang, Enquan; Li, Yunxuan; Wang, Yiwen; Liu, Dong; Cong, Yu; Liu, Jihua; Tang, Kunxian; Jiao, Nianzhi; Zheng, Qiang (2026): Seawater carbonate chemistry and physiological response of diatoms to olivine dissolution [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.994147 (DOI registration in progress)

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Published: 2026-05-08

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Abstract:
In this study, we investigated the short-term synergistic CO2 removal effects of an olivine–diatom coculture system by introducing fine-grained olivine powder directly into diatom cultures and observing the biological response. To account for potential interference from olivine particles in cell counting, we conducted additional experiments in which olivine particles were enclosed within a dialysis bag to explore both the direct and indirect influences of diatom growth on olivine dissolution. We assessed the extent by which growth-mediated uptake of H4SiO4 by diatoms accelerated olivine dissolution. Finally, we evaluated the comprehensive CO2 removal efficiency of the olivine–diatom coculture system through the fixation of organic and inorganic carbon.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2026-05-08.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Heterokontophyta; Laboratory experiment; Laboratory strains; Not applicable; Ocean alkalinity enhancement; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species; Thalassiosira pseudonana
Related to:
Zhang, Enquan; Li, Yunxuan; Wang, Yiwen; Liu, Dong; Cong, Yu; Liu, Jihua; Tang, Kunxian; Jiao, Nianzhi; Zheng, Qiang (2024): Synergistic CO 2 Removal via Enhanced Olivine Weathering and Diatom Growth in the Ocean. Ocean-Land-Atmosphere Research, 3, 0047, https://doi.org/10.34133/olar.0047
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Type of studyStudy typeZheng, Qiang
Species, unique identificationSpecies UIDZheng, Qiang
TreatmentTreatZheng, Qiang
Day of experimentDOEdayZheng, Qiang
Cell densityCells#/mlZheng, Qiang
Cell density, standard deviationCells std dev±Zheng, Qiang
Chlorophyll aChl aµg/lZheng, Qiang
Chlorophyll a, standard deviationChl a std dev±Zheng, Qiang
Photochemical quantum yieldFv/FmZheng, Qiang
10 Photochemical quantum yield, standard deviationFv/Fm std dev±Zheng, Qiang
11 Effective quantum yield of photosystem IIY(II)Zheng, Qiang
12 Effective quantum yield, standard deviationY std dev±Zheng, Qiang
13 Biogenic silicabSiO2µmol/lZheng, Qiang
14 Biogenic silica, standard deviationbSiO2 std dev±Zheng, Qiang
15 Carbon, organic, particulatePOCµmol/lZheng, Qiang
16 Carbon, organic, particulate, standard deviationPOC std dev±Zheng, Qiang
17 Silicon/Carbon, molar ratioSi/CZheng, Qiang
18 Silicon/Carbon ratio, standard deviationSi/C±Zheng, Qiang
19 Carbon/Nitrogen ratioC/NZheng, Qiang
20 Carbon/Nitrogen ratio, standard deviationC/N std dev±Zheng, Qiang
21 Potential total carbon sinkPTC sinkµmol/lZheng, Qiang
22 Potential total carbon sink, standard deviationPTC sink std dev±Zheng, Qiang
23 Silicon, totalTSiµmol/lZheng, Qiang
24 Silicon, total, standard deviationTSi std dev±Zheng, Qiang
25 Carbon, totalTCµmol/lZheng, Qiang
26 Carbon, total, standard deviationTC std dev±Zheng, Qiang
27 Alkalinity, totalATµmol/lZheng, Qiang
28 Alkalinity, total, standard deviationAT std dev±Zheng, Qiang
29 Carbon, inorganic, dissolvedDICµmol/lZheng, Qiang
30 Carbon, inorganic, dissolved, standard deviationDIC std dev±Zheng, Qiang
31 SilicateSi(OH)4µmol/lZheng, Qiang
32 Silicate, standard deviationSi(OH)4 std dev±Zheng, Qiang
33 NickelNiµmol/lZheng, Qiang
34 Nickel, standard deviationNi std dev±Zheng, Qiang
35 pH, NBS scalepH NBSZheng, Qiang
36 pH, standard deviationpH std dev±Zheng, Qiang
37 Calcite saturation stateOmega CalZheng, Qiang
38 Calcite saturation state, standard deviationOmega Cal std dev±Zheng, Qiang
39 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmZheng, Qiang
40 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Zheng, Qiang
41 SalinitySalZheng, Qiang
42 Temperature, waterTemp°CZheng, Qiang
43 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44 pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1848 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Study type

Species UID

Treat

DOE [day]

Cells [#/ml]

Cells std dev [±]

Chl a [µg/l]

Chl a std dev [±]

Fv/Fm
10 
Fv/Fm std dev [±]
11 
Y(II)
12 
Y std dev [±]
13 
bSiO2 [µmol/l]
14 
bSiO2 std dev [±]
15 
POC [µmol/l]
16 
POC std dev [±]
17 
Si/C
18 
Si/C [±]
19 
C/N
20 
C/N std dev [±]
21 
PTC sink [µmol/l]
22 
PTC sink std dev [±]
23 
TSi [µmol/l]
24 
TSi std dev [±]
25 
TC [µmol/l]
26 
TC std dev [±]
27 
AT [µmol/l]
28 
AT std dev [±]
29 
DIC [µmol/l]
30 
DIC std dev [±]
31 
Si(OH)4 [µmol/l]
32 
Si(OH)4 std dev [±]
33 
Ni [µmol/l]
34 
Ni std dev [±]
35 
pH NBS
36 
pH std dev [±]
37 
Omega Cal
38 
Omega Cal std dev [±]
39 
pCO2water_SST_wet [µatm]
40 
pCO2 std dev [±]
41 
Sal
42 
Temp [°C]
43 
CSC flag
44 
pHT
45 
CO2 [µmol/kg]
46 
fCO2water_SST_wet [µatm]
47 
pCO2water_SST_wet [µatm]
48 
[HCO3]- [µmol/kg]
49 
[CO3]2- [µmol/kg]
50 
DIC [µmol/kg]
51 
AT [µmol/kg]
52 
Omega Arg
53 
Omega Cal
laboratoryThalassiosira pseudonanaControl B104223.33607.582.260.110.7060.01250.6450.01040.900.1639.182.130.02320.00438.920.361705.0341.5338.904.211684.205.291722.272.431445.690.3938.013.530.0231730.0026828.450.034.490.04101.226.633020158.255.73171.97172.551236.79173.511416.021686.922.764.30
laboratoryThalassiosira pseudonanaControl B1112485.001133.906.680.420.6900.00640.6060.00122.670.3444.944.940.05970.00628.160.161712.9913.3740.424.441696.6512.701722.7313.271457.522.2037.773.730.0241000.0058468.390.004.390.20118.161.143020158.226.13184.00184.631254.61166.871427.611687.382.664.14
laboratoryThalassiosira pseudonanaControl B1244366.6711095.6323.743.960.6600.00210.5800.00099.432.2880.5911.650.11980.02968.150.331759.0649.8044.832.591749.618.921730.8714.541448.164.2037.370.610.0229410.0027078.490.044.560.1596.572.293020158.265.58167.68168.251235.33177.521418.441695.352.834.40
laboratoryThalassiosira pseudonanaControl B13220870.008569.1779.8812.510.6670.00100.5520.003327.552.49173.968.630.14380.00617.010.351885.8948.9644.073.651753.7914.381748.4316.701346.839.5021.432.170.0278070.0022708.910.056.480.2841.593.603020158.472.9688.8589.151066.51249.721319.191712.553.986.19
laboratoryThalassiosira pseudonanaControl B14220065.0019804.20151.554.140.5990.00250.2980.008846.840.54405.6734.720.09170.00347.670.492230.2952.3545.770.471777.0135.261765.1015.351033.1613.950.890.110.0234040.0098419.370.0211.420.303.300.183020158.990.4714.1314.18567.27444.221011.961728.887.0711.01
laboratoryThalassiosira pseudonanaControl B15177391.6740443.32181.324.920.5470.00550.2510.002945.593.58609.1358.960.07520.00719.390.322325.4493.8444.513.471789.2553.581771.3612.56964.048.43-0.110.160.0220140.0017119.420.0112.410.112.570.093020159.120.288.528.55459.78484.19944.261735.017.7112.00
laboratoryThalassiosira pseudonanaControl B16147271.679430.42179.9015.300.5310.01010.2550.004344.632.38738.3134.450.06090.00699.790.182428.5653.8743.942.541888.3438.521772.487.24976.3412.59-0.040.080.0249110.0084309.360.0212.320.033.330.233020159.100.319.289.31477.16478.83956.301736.107.6211.87
laboratoryThalassiosira pseudonanaExperimetnt B204201.67459.602.250.050.6920.02030.6450.01620.900.1737.551.890.02400.00298.630.451697.6825.2044.451.861696.6415.741729.437.371458.8010.6143.561.980.0244470.0043638.430.024.360.10107.964.673020158.235.99179.91180.521252.72170.151428.861693.942.714.22
laboratoryThalassiosira pseudonanaExperimetnt B2110680.00709.746.790.190.6940.00210.6060.00242.280.1154.374.740.04200.00148.230.441740.2037.8347.974.141714.220.691734.074.741472.704.6545.714.230.0373080.0021688.420.024.300.13110.255.743020158.216.37191.22191.871271.25164.861442.481698.482.624.09
laboratoryThalassiosira pseudonanaExperimetnt B2240408.33969.2325.636.800.6600.00100.5830.00128.640.6167.946.480.12830.01628.190.421844.2949.9352.833.561766.5440.191734.2518.851474.302.6044.214.060.0420580.0094088.430.014.300.1996.731.513020158.216.42192.82193.471273.54164.081444.041698.662.614.07
laboratoryThalassiosira pseudonanaExperimetnt B23204991.6727024.2974.3511.310.6630.00320.5530.001724.115.62164.606.420.12860.02246.890.471964.0125.1158.893.521799.1813.331777.359.661406.576.1234.801.090.0544560.0023638.720.046.010.1944.654.303020158.413.64109.46109.831141.75232.311377.701740.873.705.76
laboratoryThalassiosira pseudonanaExperimetnt B24279308.3324922.22192.9416.090.6470.00600.4160.002459.450.94436.7232.460.11870.00517.220.222315.5212.8062.721.031880.3026.241800.576.081161.2220.503.271.730.0544560.0024149.320.0610.290.334.520.693020158.830.9026.9927.08740.35396.141137.391763.626.319.82
laboratoryThalassiosira pseudonanaExperimetnt B25275628.3315658.64218.135.940.5890.00120.2720.002167.493.78731.4036.560.09250.00638.580.082563.1832.5667.582.951899.9029.751799.0410.64958.384.980.090.150.0470400.0043449.480.0112.910.172.020.063020159.170.247.267.28433.51504.96938.711762.128.0412.52
laboratoryThalassiosira pseudonanaExperimetnt B26262238.332399.15243.435.110.5610.00100.2690.002675.240.64807.3323.530.09330.00278.810.282643.1427.6775.170.361950.7318.381800.4410.62944.932.06-0.070.170.0435640.0035949.450.0113.220.152.180.043020159.190.226.506.52413.16512.16925.541763.498.1512.70
laboratoryThalassiosira pseudonanaExperimetnt B303968.33600.692.120.020.7130.02790.6610.01410.840.0738.462.390.02200.00248.700.271687.5647.0047.231.361703.4152.961729.3024.581490.4665.5446.411.390.0553830.0143388.450.083.990.49103.1917.733020158.177.26217.99218.741301.13151.481459.871693.812.413.76
laboratoryThalassiosira pseudonanaExperimetnt B3112793.332385.666.840.410.6950.00260.5960.00572.750.6542.207.120.06620.01418.190.481716.6043.4455.902.741723.1143.521727.4720.781495.1260.1353.173.190.0760060.0117858.310.103.910.48116.703.433020158.157.55226.82227.591309.43147.461464.441692.022.353.66
laboratoryThalassiosira pseudonanaExperimetnt B3239693.336548.6628.896.510.6580.00290.5910.00258.430.9785.9116.770.09970.01298.470.381885.0016.9159.150.491810.1555.771747.8427.031488.4257.0850.740.750.0698650.0108708.450.094.280.7191.691.963020158.206.56196.89197.571287.18164.141457.871711.972.614.07
laboratoryThalassiosira pseudonanaExperimetnt B33210705.007157.9166.755.000.6660.00060.5550.000825.494.30175.654.500.13530.01046.970.321995.2533.7260.334.011821.2863.931768.797.331413.0643.2234.866.670.0945440.0046468.710.065.890.4846.447.553020158.383.90117.24117.641157.32222.841384.061732.493.555.52
laboratoryThalassiosira pseudonanaExperimetnt B34286670.0014427.85187.0422.870.6620.00320.5180.001261.295.63467.8229.000.12040.00757.390.192334.2035.1771.822.871919.4954.711788.1417.071178.4952.1810.531.740.0816830.0027079.310.119.800.415.081.753020158.791.0431.2131.32776.48376.781154.301751.446.009.34
laboratoryThalassiosira pseudonanaExperimetnt B35349966.6734887.33247.2412.440.5990.00400.2920.003176.413.13772.0124.620.09760.00248.190.152627.987.4576.412.481940.3518.641797.2210.47927.8118.780.000.080.0682430.0157929.580.0213.290.321.310.133020159.220.195.755.77390.80517.77908.771760.348.2412.84
laboratoryThalassiosira pseudonanaExperimetnt B36287540.007171.84269.7312.360.5740.00460.2740.000583.455.40934.5720.750.08930.00448.060.182779.1914.4683.234.392022.1018.941810.295.75889.9916.17-0.210.020.0607120.0029819.560.0313.890.201.330.183020159.310.133.933.94330.23541.37871.731773.148.6213.42
laboratoryThalassiosira pseudonanaControl A1037.683.941688.292.191693.548.161494.500.9337.703.220.0198130.0002848.400.013.280.84119.092.183020158.088.98269.78270.701327.44127.411463.831658.782.033.16
laboratoryThalassiosira pseudonanaControl A1137.712.741668.5725.721720.5613.021473.8628.2437.722.240.0170320.0029638.340.044.550.94137.008.573020158.186.83205.18205.881280.82155.961443.611685.252.483.87
laboratoryThalassiosira pseudonanaControl A1241.882.061684.2518.751718.555.271493.9534.3441.891.680.0275750.0031908.290.084.200.42162.7415.893020158.147.83235.12235.921312.54142.921463.291683.282.283.54
laboratoryThalassiosira pseudonanaControl A1341.861.791709.2919.491726.323.571516.5128.0941.881.460.0235200.0015638.240.044.140.46195.493.793020158.108.69260.85261.741342.02134.681485.391690.892.143.34
laboratoryThalassiosira pseudonanaControl A1441.061.721712.6412.401723.779.261523.7319.3741.071.400.0249110.0050008.200.043.900.39214.224.033020158.089.23277.34278.281354.24128.991492.461688.392.053.20
laboratoryThalassiosira pseudonanaControl A1540.372.521731.598.451726.2312.711537.4911.4340.382.060.0251420.0044008.170.053.700.41239.434.183020158.059.99299.99301.011373.32122.631505.941690.801.953.04
laboratoryThalassiosira pseudonanaControl A1640.151.151745.473.841727.5214.531550.198.5540.160.940.0234040.0011828.130.033.490.47255.927.373020158.0210.82324.97326.081391.36116.201518.381692.071.852.88
laboratoryThalassiosira pseudonanaExperimetnt A2042.350.321658.1228.841704.6422.361459.8433.5839.430.320.0304720.0119488.380.063.440.72121.6712.973020158.186.78203.77204.461268.95154.141429.881669.662.453.82
laboratoryThalassiosira pseudonanaExperimetnt A2144.822.301691.4138.271730.461.341498.6844.9349.742.300.0447230.0202498.370.053.740.54130.1717.663020158.157.60228.24229.011312.99147.341467.921694.952.353.65
laboratoryThalassiosira pseudonanaExperimetnt A2249.141.961748.2310.611742.429.701552.0516.7249.161.960.0458820.0020478.310.043.670.36155.8113.073020158.0510.07302.44303.471386.20123.931520.201706.661.973.07
laboratoryThalassiosira pseudonanaExperimetnt A2350.392.371766.2910.611768.3024.041571.4011.2850.412.370.0560780.0093548.270.043.830.15179.7615.103020158.069.91297.72298.731400.69128.551539.151732.012.053.19
laboratoryThalassiosira pseudonanaExperimetnt A2450.311.581791.962.301779.4824.021596.432.0350.331.580.0597850.0027078.230.073.720.20183.148.003020158.0311.00330.49331.621431.68120.981563.671742.961.933.00
laboratoryThalassiosira pseudonanaExperimetnt A2552.390.331816.453.211775.6719.051621.672.2052.410.330.0619870.0060698.210.033.310.29202.447.573020157.9513.45404.03405.411470.53104.401588.391739.231.662.59
laboratoryThalassiosira pseudonanaExperimetnt A2658.872.151835.338.391811.0316.981637.3412.3758.892.150.0690540.0175238.200.023.650.37215.692.833020158.0012.13364.35365.591475.11116.501603.741773.861.852.89
laboratoryThalassiosira pseudonanaExperimetnt A3045.053.471669.4141.601709.6517.901474.6154.9545.073.470.0538760.0074608.420.083.880.74113.4610.453020158.167.26218.06218.801288.56148.531444.351674.562.363.68
laboratoryThalassiosira pseudonanaExperimetnt A3147.821.061685.5841.581738.401.281488.6149.1747.841.060.0696340.0113718.370.074.150.49128.261.563020158.196.86206.14206.841293.00158.201458.061702.722.523.92
laboratoryThalassiosira pseudonanaExperimetnt A3251.842.211757.994.641742.4324.761563.277.6551.862.210.0817990.0025598.310.073.840.53159.1915.193020158.0210.88326.69327.801402.81117.501531.191706.671.872.91
laboratoryThalassiosira pseudonanaExperimetnt A3356.832.991783.2711.121757.9718.171587.0314.7556.852.990.0937610.0095248.270.063.620.11172.5514.783020158.0011.72351.91353.101429.48113.271554.461721.891.802.81
laboratoryThalassiosira pseudonanaExperimetnt A3451.710.661789.858.181769.849.331593.207.4951.730.660.0991790.0083058.230.063.560.20183.424.583020158.0111.39342.01343.171432.14116.981560.501733.521.862.90
laboratoryThalassiosira pseudonanaExperimetnt A3555.951.241810.742.801776.133.781615.435.5555.971.240.1030020.0016148.200.053.120.17202.740.793020157.9712.83385.34386.661461.35108.101582.281739.681.722.68
laboratoryThalassiosira pseudonanaExperimetnt A3659.691.631841.3411.561810.295.751647.089.2959.721.630.1034660.0058198.160.033.440.09214.854.543020157.9713.04391.72393.051489.72110.511613.281773.141.762.74