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Yapan, Batuhan Cagri; Janssen, Felix; Haeckel, Matthias; Boetius, Antje; Molari, Massimiliano (2026): Carbon, nitrogen, and sulfur in sediments from cores collected during R/V SONNE cruise SO268/1 and SO268/2 in the Eastern North Pacific Ocean [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.992892 (DOI registration in progress)

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Published: 2026-03-12

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Abstract:
The data set reports organic carbon (TOC), total carbon (TC), total nitrogen (TN), and total sulfur (TS) concentrations in the upper horizons of deep-sea sediments. The data can further be used to calculate derived parameters total inorganic carbon (TIC=TC-TOC), CaCO3 (TIC*8.3333), and the C/N ratio (TOC/TN). Samples were taken with a Multiple Corer (MUC) and with Push Cores (PUC) that were recovered by the Remotely Operated Vehicle (ROV) KIEL6000 of GEOMAR in Kiel, Germany during two subsequent expeditions with the German Research Vessel SONNE (SO268/1 and SO268/2). Samples originate from six different locations in polymetallic nodule ecosystems in the deep Eastern North Pacific Ocean. Four are situated in the exploration license area of the German Bundesanstalt für Geowissenschaften und Rohstoffe (Federal Institute for Geosciences and Natural Resources; abbreviated BGR) granted by the International Seabed Authority (ISA). These include the Reference Site (GER Reference Site), a site that is designated for a nodule collector prototype trial (GER Trial Site), a site near the Reference Site where a benthic impact experiment (BIE) was carried out (GER Dredge Site) and a site where no polymetallic nodules are found (GER No-Nodule Site). The other two sites were located in the exploration license area of the Belgian company Global Sea Mineral Resources NV (abbreviated GSR): again a Reference Site (BEL Reference Site) and a trial site (BEL Trial Site). The primary aim of the study was to address natural spatial variability in benthic biogeochemistry and characterize baseline conditions in preparation of trials of GSR's pre-prototype polymetallic nodule collector Patania II and for the smaller BIE carried out with a dredge during SO268/2 on 11. Apr. 2019. Further the dredge area was sampled after the BIE to assess the impacts. Carbon, Nitrogen and Sulfur are determined based on the principle described by Kirsten (1979). Total carbon (TC), total nitrogen (TN), total Sulfur (TS), and total organic carbon (TOC) are analyzed with a Euro EA 3000 Elemental Analyzer (EuroVector Srl, Italy).
Samples are collected on board from homogenized wet sediment slices of cores and frozen at -20°C until analysis in the shore lab. In case of PUCs, layers from 2 cores are pooled before homogenizing. In the shore lab, samples are freeze-dried and homogenized by planetary mill (Pulverisette 7, Fritsch, Germany), mortar, and pestle. Two Aliquots are taken from each sample, pre-weighed, and analyzed in two runs. In the first run measurements are conducted both before (for TC, TN, and TS) and after (for TOC) acidification with HCl. In the second run, no acidification is performed and analyses are restricted to C and N. Sulfanilamide standards are used for calibration.
Keyword(s):
biogeochemistry; Clarion Clipperton Fracture Zone; Deep sea
Supplement to:
Yapan, Batuhan Cagri; Janssen, Felix; Boetius, Antje; Haeckel, Matthias; Molari, Massimiliano (in review): Diversity and Connectivity of Bacterial Communities in Polymetallic Nodule-Rich Abyssal Plains (Eastern Tropical Pacific). Frontiers in Marine Science
References:
Kirsten, Wolfgang J (1979): Automatic methods for the simultaneous determination of carbon, hydrogen, nitrogen, and sulfur, and for sulfur alone in organic and inorganic materials. Analytical Chemistry, 51(8), 1173-1179, https://doi.org/10.1021/ac50044a019
Funding:
Federal Ministry of Education and Research (BMBF), grant/award no. 03F0812A: JPI-O MiningImpact: Monitoringkonzepte für einen Manganknollenabbau in der Tiefsee
Federal Ministry of Education and Research (BMBF), grant/award no. 03F0812D: JPI-O MiningImpact: Auswirkungen von Manganknollen-Abbau auf benthische Megafauna- und Mikroorganismen-Gemeinschaften und ihre Funktionen
Coverage:
Median Latitude: 12.418891 * Median Longitude: -119.258354 * South-bound Latitude: 11.840783 * West-bound Longitude: -125.928933 * North-bound Latitude: 14.112633 * East-bound Longitude: -117.011683
Date/Time Start: 2019-03-03T09:33:07 * Date/Time End: 2019-05-15T08:45:50
Minimum Elevation: -4549.1 m * Maximum Elevation: -4087.3 m
Event(s):
SO268/1_18-1 (MUC-04) * Latitude: 11.924233 * Longitude: -117.017317 * Date/Time: 2019-03-03T09:33:07 * Elevation: -4099.3 m * Location: Clarion-Clipperton Fraction Zone, North East Pacific Ocean * Campaign: SO268/1 * Basis: Sonne_2 * Method/Device: MultiCorer (MUC) * Comment: GER Trial; Position USBL
SO268/1_19-1 (MUC-05) * Latitude: 11.921483 * Longitude: -117.013650 * Date/Time: 2019-03-03T12:45:30 * Elevation: -4106.9 m * Location: Clarion-Clipperton Fraction Zone, North East Pacific Ocean * Campaign: SO268/1 * Basis: Sonne_2 * Method/Device: MultiCorer (MUC) * Comment: GER Trial; Position USBL
SO268/1_26-1 (MUC-06) * Latitude: 11.933917 * Longitude: -117.029583 * Date/Time: 2019-03-06T04:03:20 * Elevation: -4087.3 m * Location: Clarion-Clipperton Fraction Zone, North East Pacific Ocean * Campaign: SO268/1 * Basis: Sonne_2 * Method/Device: MultiCorer (MUC) * Comment: GER Trial; Position USBL
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventYapan, Batuhan Cagri
2Sample IDSample IDYapan, Batuhan Cagri
3Sample commentSample commentYapan, Batuhan Cagri
4DATE/TIMEDate/TimeYapan, Batuhan CagriGeocode
5LATITUDELatitudeYapan, Batuhan CagriGeocode
6LONGITUDELongitudeYapan, Batuhan CagriGeocode
7ELEVATIONElevationm a.s.l.Yapan, Batuhan CagriGeocode
8DATE/TIMEDate/TimeYapan, Batuhan CagriGeocode – of second sample for pooled sediment when sampled at another location
9LATITUDELatitudeYapan, Batuhan CagriGeocode – of second sample for pooled sediment when sampled at another location
10LONGITUDELongitudeYapan, Batuhan CagriGeocode – of second sample for pooled sediment when sampled at another location
11ELEVATIONElevationm a.s.l.Yapan, Batuhan CagriGeocode – of second sample for pooled sediment when sampled at another location
12Depth, top/minDepth topmYapan, Batuhan Cagri
13Depth, bottom/maxDepth botmYapan, Batuhan Cagri
14DEPTH, sediment/rockDepth sedmYapan, Batuhan CagriGeocode
15Carbon, organic, totalTOC%Yapan, Batuhan CagriEURO EA Elemental Analyzermeasurement first run
16Carbon, totalTC%Yapan, Batuhan CagriEURO EA Elemental Analyzermeasurement first run
17Carbon, totalTC%Yapan, Batuhan CagriEURO EA Elemental Analyzermeasurement second run
18Nitrogen, totalTN%Yapan, Batuhan CagriEURO EA Elemental Analyzermeasurement first run
19Nitrogen, totalTN%Yapan, Batuhan CagriEURO EA Elemental Analyzermeasurement second run
20Sulfur, totalTS%Yapan, Batuhan CagriEURO EA Elemental Analyzermeasurement first run
21CommentCommentYapan, Batuhan Cagri
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1320 data points

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