Guitard, Joëlle J; Chabot, Denis; Senay, Caroline; Robert, Dominique; Deslauriers, David (2025): Seawater carbonate chemistry and metabolism and growth of redfish (Sebastes fasciatus) in the Gulf of St. Lawrence [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.987675 (DOI registration in progress)
Always quote citation above when using data! You can download the citation in several formats below.
Published: 2025-11-24
Abstract:
We quantified the effects of four acclimation temperatures (2.5, 5.0, 7.5, and 10.0 °C) and two ocean acidification scenarios (current and future) on standard and maximum metabolic rates (SMR and MMR), aerobic scope (AS), factorial aerobic scope, hypoxia tolerance (O2crit), food consumption, growth and food conversion efficiency (FCE) in redfish (Sebastes fasciatus Storer, 1854).
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Borealis Repository (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-11-24.
Keyword(s):
Related to:
Guitard, Joëlle J; Chabot, Denis; Senay, Caroline; Robert, Dominique; Deslauriers, David (2025): Warming, but not acidification, increases metabolism and reduces growth of redfish ( Sebastes fasciatus ) in the Gulf of St. Lawrence. Canadian Journal of Zoology-Revue Canadienne de Zoologie, 103, 1-18, https://doi.org/10.1139/cjz-2025-0014
Source:
Guitard, Joëlle J; Chabot, Denis; Deslauriers, David (2025): Warming, but not acidification, increases metabolism and reduces growth of redfish (Sebastes fasciatus) in the Gulf of St. Lawrence [dataset]. Borealis, https://doi.org/10.5683/SP3/TB6R3E
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Coverage:
Latitude: 48.317801 * Longitude: -69.413287
Date/Time Start: 2019-09-01T00:00:00 * Date/Time End: 2019-10-31T00:00:00
Event(s):
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Type of study | Study type | Guitard, Joëlle J | |||
| 2 | Species, unique identification | Species UID | Guitard, Joëlle J | |||
| 3 | Species, unique identification (URI) | Species UID (URI) | Guitard, Joëlle J | |||
| 4 | Species, unique identification (Semantic URI) | Species UID (Semantic URI) | Guitard, Joëlle J | |||
| 5 | Identification | ID | Guitard, Joëlle J | Tank | ||
| 6 | Identification | ID | Guitard, Joëlle J | Fish | ||
| 7 | Treatment: temperature | T:temp | °C | Guitard, Joëlle J | ||
| 8 | Treatment: pH | T:pH | Guitard, Joëlle J | |||
| 9 | Group | Group | Guitard, Joëlle J | |||
| 10 | Mass | Mass | g | Guitard, Joëlle J | Mass of fish weighted on June 28th 2021 (Origil fish only) | |
| 11 | Mass | Mass | g | Guitard, Joëlle J | Mass of fish weighted on July 13 2021 (Added fish only) | |
| 12 | Mass | Mass | g | Guitard, Joëlle J | Mass of fish weighted on October 20th 2021 (Origil and added fish) | |
| 13 | Specific growth rate | SGR | %/day | Guitard, Joëlle J | for the period between June 28th and october 20th 2021 for Originial fish and July 13 and October 20th 2021 for Added fish | |
| 14 | Length | l | mm | Guitard, Joëlle J | fish measured on June 28th 2021 (Origil fish only) | |
| 15 | Length | l | mm | Guitard, Joëlle J | fish measured on July 13 2021 (Added fish only) | |
| 16 | Length | l | mm | Guitard, Joëlle J | Lenght of fish measured on October 20th 2021 (Origil and added fish) | |
| 17 | Temperature, water | Temp | °C | Guitard, Joëlle J | recorded in which fish were exposed for the growth experiment | |
| 18 | Date | Date | Guitard, Joëlle J | feeding | ||
| 19 | Prey taxa | Prey | Guitard, Joëlle J | |||
| 20 | Mass | Mass | g | Guitard, Joëlle J | Quantity of food that were ingested by the fish in that tank for that meal | |
| 21 | Fish | Fish | # | Guitard, Joëlle J | number of fish in that tank for that meal | |
| 22 | Local Time | Local time | Guitard, Joëlle J | Time that the feeding started | ||
| 23 | Duration | Duration | min | Guitard, Joëlle J | Time it took to complete the feeding of the fish in that tank | |
| 24 | Name | Name | Guitard, Joëlle J | Day of the week associated to that date | ||
| 25 | Date | Date | Guitard, Joëlle J | first day of the week associated to the feeding of that tank for that week | ||
| 26 | Mass | Mass | g | Guitard, Joëlle J | Total food ingested by that tank during that week (sum of Qut_cons) | |
| 27 | Food consumption | Food con | mg/week | Guitard, Joëlle J | per fish | |
| 28 | Mass | Mass | g | Guitard, Joëlle J | Quantity of food ingested per fish per meal (Qut_cons / nb.seb) | |
| 29 | Number | No | Guitard, Joëlle J | Session at which fish underwent respirometry | ||
| 30 | Number | No | Guitard, Joëlle J | system in which fish underwent respirometry | ||
| 31 | Identification | ID | Guitard, Joëlle J | Chamber in which fish underwent respirometry | ||
| 32 | pH, total scale | pHT | Guitard, Joëlle J | Actual pH obtain during respirometry | ||
| 33 | Identification | ID | Guitard, Joëlle J | Experimental tank in which fish were held for the growth experiment | ||
| 34 | Mass | Mass | g | Guitard, Joëlle J | fish at the time of respirometry | |
| 35 | Ratio | Ratio | Guitard, Joëlle J | Ratio of the water volume from the respirometry chamber and recirculation loop over the mass of the fish | ||
| 36 | Proportion | Prop | Guitard, Joëlle J | slopes that were rejected for SMR based on minR2 | ||
| 37 | Proportion | Prop | Guitard, Joëlle J | slopes that were rejected from the whole respirometry experiment based on minR2 | ||
| 38 | Metabolic rate of oxygen, standard | SMR O2 | mg/kg/h | Guitard, Joëlle J | with and without the nights | |
| 39 | Metabolic rate of oxygen, standard | SMR O2 | mg/kg/h | Guitard, Joëlle J | night excluded | |
| 40 | Comment | Comment | Guitard, Joëlle J | Were night rejected or included for the SMR used for alysis | ||
| 41 | Metabolic rate of oxygen, standard | SMR O2 | mg/kg/h | Guitard, Joëlle J | Lowest SMR between theone where nights were included or excluded | |
| 42 | Metabolic rate of oxygen, standard | SMR O2 | mg/kg/h | Guitard, Joëlle J | Maximal metabolic rate obtained through linear regression | |
| 43 | Metabolic rate of oxygen, standard | SMR O2 | mg/kg/h | Guitard, Joëlle J | Maximal metabolic rate obtained through rolling regression | |
| 44 | Metabolic rate of oxygen, standard | SMR O2 | mg/kg/h | Guitard, Joëlle J | Highest MMR between MMRreg and MMRrol | |
| 45 | Absolute aerobic scope | AAS | mg/kg/h | Guitard, Joëlle J | MMRbest- SMRbest | |
| 46 | Absolute aerobic scope | AAS | Guitard, Joëlle J | Factorial | ||
| 47 | Hypoxia tolerance | Hypoxia tolerance | Guitard, Joëlle J | % air sat. | ||
| 48 | Coefficient of determination | R**2 | Guitard, Joëlle J | Minimum R2 used to keep slopes for the calculation of SMR | ||
| 49 | Time in hours | Time h | h | Guitard, Joëlle J | Acclimation | |
| 50 | Percentage | Perc | % | Guitard, Joëlle J | Percentages of the bacterial respiration on SMR | |
| 51 | Comment | Comment | Guitard, Joëlle J | Reject | ||
| 52 | Dissolved oxygen saturation | DO sat | % | Guitard, Joëlle J | average of dissolved oxygen taken in the middle of the slope for all slopes for SMR | |
| 53 | pH, total scale | pHT | Guitard, Joëlle J | mean from 2 July to 20 October 2021 | ||
| 54 | pH, standard deviation | pH std dev | ± | Guitard, Joëlle J | total scale | |
| 55 | Alkalinity, total | AT | µmol/kg | Guitard, Joëlle J | mean from 2 July to 20 October 2021 | |
| 56 | Alkalinity, total, standard deviation | AT std dev | ± | Guitard, Joëlle J | ||
| 57 | Salinity | Sal | Guitard, Joëlle J | |||
| 58 | Salinity, standard deviation | Sal std dev | ± | Guitard, Joëlle J | ||
| 59 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Guitard, Joëlle J | mean from 2 July to 20 October 2021 | |
| 60 | Partial pressure of carbon dioxide, standard deviation | pCO2 std dev | ± | Guitard, Joëlle J | ||
| 61 | Carbonate system computation flag | CSC flag | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | ||
| 62 | Carbon dioxide | CO2 | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
| 63 | Fugacity of carbon dioxide (water) at sea surface temperature (wet air) | fCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
| 64 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
| 65 | Bicarbonate ion | [HCO3]- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
| 66 | Carbonate ion | [CO3]2- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
| 67 | Carbon, inorganic, dissolved | DIC | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
| 68 | Aragonite saturation state | Omega Arg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | ||
| 69 | Calcite saturation state | Omega Cal | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
43191 data points
Download Data
View dataset as HTML (shows only first 2000 rows)