Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Alatortsev, Alexander; Astakhov, Anatolii S; Babich, Valeriy V; Darin, Andrey V; Aksentov, Kirill; Sattarova, Valentina; Kirichenko, Ivan S; Kolesnik, Alexandr; Melgunov, Mikhail; Ponomarev, Vladimir (2025): Geochemical composition (corrected) of the Late Holocene sediments core LV66-3 (Amur Bay of the Sea of Japan) and result of paleoclimatic reconstructions [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.987515 (DOI registration in progress), In: Alatortsev, A et al. (2025): Geochemical data of the Late Holocene sediments core LV66-3 (Amur Bay of the Sea of Japan) and results of air temperature and precipitation reconstructions for summer and winter by transfer functions [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.987511

Always quote citation above when using data! You can download the citation in several formats below.

Published: 2025-11-24

RIS CitationBibTeX Citation ShareShow MapGoogle Earth

Abstract:
Sediment core LV66-3 (43°07,473' N,131°49,622' E length of 466 cm; water depth 33 m) was collected in 2014 during the 66th cruise of the R/V Akademik M.A. Lavrentiev in the Amur Bay of the Sea of Japan using a gravity core. The sampling location was chosen in the zone of maximum bottom water hypoxia (Tishchenko et al., 2011), which ensured minimal bioturbation of sediments due to oppression of benthic fauna. Continuous seismic profiling data at this site revealed a homogeneous structure of the sedimentary strata, with no visible breaks in sedimentation and no inclusions of sediments of a different composition (Karnaukh et al., 2016).
The sediments of core LV66-3 are represented by monotonous clays and silty clays of black or dark gray color without visible stratification, with slightly varying density and humidity (Akulichev et al., 2015; Karnaukh et al., 2016). The analysis of the prepared samples was performed in the Budker Institute of Nuclear Physics (Novosibirsk) using a scanning X-ray fluorescence analyzer with the synchrotron radiation (XRF SR ) at the VEPP-3 storage ring as the excitation source according to previously developed methods (Darin et al., 2005; 2015; Kalugin et al., 2007; 2015). The scanning step was 0.5-0.8 mm. The concentrations of Ca, K, Ti, Mn, Fe, V, Cr, Ni, Cu, Zn, Mo, Pb, Rb, Ba, Sr, Y, Br, As, and Nb were determined. The detection limits for the elements were (mg/g): 0.5 (Br, Rb, Sr, Nb), 1 (Zr, Y), 2 (Zn, Ni, Mn, Pb), 10 (Fe), 15 (Ti), and 100 (Ca, K) (Kalugin et al., 2015). Rubidium-normalized elements were used for dimensionless variation. The age model of core LV66-3 was based on radiocarbon dates, tephrochronological data, and chemostratigraphy. Calibration of the 14C dates to obtain the calendar age of the studied samples was performed with the Calib program (Stuiver and Reimer, 1993) using the Marine13 calibration curve (Reimer et al., 2013). Correction of the reservoir effect was made using the dating of shells from Novik Bay in the eastern part of the Amur Bay (Kuzmin et al., 2001). Geochemical time-series were created using a methodology previously developed for Siberian lakes (Kalugin et al., 2007; 2013; Darin et al., 2005; 2015; Hildebrandt wet al., 2015; Babich et al., 2015; Rudaya et al., 2016) based on the results of XRF SR scanning of the core in the 0-466 cm interval and its age model with some additions that have been used in paleoreconstructions of shelf sediments in the Arctic seas (Astakhov et al., 2019; 2020; 2023). Considering the feature accumulation of sediment in the Amur Bay (Tishchenko et al., 2006; 2011, Akulichev et al., 2016;, Kalugin et al., 2015) and the experience construction of transfer geochemical functions for other areas (Kalugin et al., 2005; 2013; Babich et al., 1980; 2023; Astakhov et al., 2019; 2023), some elements were removed from the initial feature space: Zr, Nb, and Y are significantly enriched in the tephra of the Baitoushan volcano and overlying sediments, molybdenum is the element with maximum response to redox conditions, lead and zinc are possible anthropogenic contaminants in the surface sediment layer (Kalugin et al., 2015), and elements with very low content and weak variability.
The final processing of the remaining 14-element XRF SR scan data matrix (this table) for the construction of transfer functions and paleoclimatic reconstructions was carried out in the following order:
- removal of sampling intervals containing instrumental errors, coinciding with layers of different composition (pyroclastics), and showing signs of intense diagenetic transformations; for these reasons, geochemical data for layers 352-363, 372-380 and 426-466 cm were removed;
- correction of the content of elements that give anomalous extremes due to the presence of fragments of plant remains, shells and minerals in the sedimentary layers; in these cases, the anomalous contents of chemical elements were replaced by the values obtained by interpolation taking into account their contents in the four nearest sampling points (two from above, two from below);
- generate fractional time-scale geochemical series by transferring geochemical information from the linear scale to the time scale corresponding to the age model of the core;
- reduction of time series with a fractional time scale to an integral annual time scale with their subsequent smoothed using an 11-year moving average (hereafter referred to as decadal averages);
- rubidium normalization of the chemical elements content (this table);
- minimax normalization of chemical elements (this table), which makes it possible to bring them into a comparable form, regardless of the scale of their measurement.
Keyword(s):
Geochemistry; Japan Sea; Late Holocene; paleoclimatology; shelf sediments; synchrotron radiation; transfer functions; X-ray fluorescence (XRF)
Related to:
Astakhov, Anatoly S; Babich, Valeriy V; Darin, Andrey V; Kalugin, Ivan A; Aksentov, Kirill; Sattarova, Valentina; Kirichenko, Ivan S; Kolesnik, Alexander N; Melgunov, Mikhail S; Ponomarev, Vladmir N; Alatortsev, A V (submitted): Westerlies influenced monsoonal climate: reconstructions of summer/winter temperature and precipitation based on Japan Sea shelf Late Holocene sediments geochemistry. Paleoceanography and Paleoclimatology
References:
Akulichev, V A; Astakhov, Anatolii S; Karnaukh, V N; Aksentov, KI; Artemova, Antonina V; Bosin, Aleksandr A; Vereshchagina, O F; Vologina, Elena G; Ivanov, Mikhail V; Kalinchuk, V V; Sukhoveev, E N (2015): Geoacoustic evidence of methane migration from submarine coaliferous formations to Holocene sediments (Amur Bay, Sea of Japan). Doklady Earth Sciences, 460(2), 163-167, https://doi.org/10.1134/S1028334X15020087
Akulichev, V A; Astakhov, Anatolii S; Malakhov, Mikhail I; Aksentov, KI; Karabtsov, A A; Mar’yash, A A; Alatortsev, A V (2016): The first discovery of cryptotephra of the catastrophic eruptions of the Baitoushan volcano in the tenth century A.D. in the shelf deposits of the Sea of Japan. Doklady Earth Sciences, 469(2), 887-891, https://doi.org/10.1134/S1028334X16080201
Astakhov, Anatolii S; Babich, Valeriy V; Shi, Xuefa; Hu, Limin; Obrezkova, Maria S; Aksentov, KI; Alatortsev, A V; Darin, Andrey V; Kalugin, Ivan A; Karnaukh, V N; Melgunov, Mikhail S (2023): Climate and ice conditions of East Siberian Sea during Holocene: Reconstructions based on sedimentary geochemical multiproxy. The Holocene, 33(1), 3-13, https://doi.org/10.1177/09596836221126049
Astakhov, Anatolii S; Dar’in, A V; Kalugin, Ivan A; Aksentov, KI (2019): Reconstructing the Frequency of Catastrophic Floods on the Western Coast of the Sea of Japan Based on Sedimentary Proxy. Russian Meteorology and Hydrology, 44(1), 62-70, https://doi.org/10.3103/S1068373919010072
Astakhov, Anatolii S; Shi, Suefa; Darin, Andrey V; Kalugin, Ivan A; Hu, Limin; Tsoy, Ira B; Kolesnik, Alexander N; Obrezkova, Maria S; Alatotsev, Alexandr V; Babich, Valeriy V; Plotnikov, Vladimir V (2020): Reconstructing ice conditions in the southern Chukchi Sea during the last millennium based on chemical composition of sediments and diatom assemblages. Marine Geology, 106220, https://doi.org/10.1016/j.margeo.2020.106220
Babich, Valeriy V; Daryin, Andrei V; Rudaya, N A; Markovich, T I (2023): Two Millennia of Climate History for the Russian Altai: Integrated Reconstruction from Lake Sediment Data. Russian Geology and Geophysics, 64(10), 1217-1226, https://doi.org/10.2113/RGG20234585
Darin, Andrey V; Aleksandrin, M Yu; Kalugin, Ivan A; Solomina, O N (2015): Influence of meteorological conditions on the geochemistry of modern bottom sediments exemplified by deposits of Donguz-Orun Lake, Caucasus. Doklady Earth Sciences, 463(2), 842-846, https://doi.org/10.1134/S1028334X15080097
Darin, Andrey V; Babich, Valeriy V; Markovich, T I; Darin, F A; Sorokoletov, D S; Rakshun, Ya V; Karachurina, S E; Rudaya, N A (2023): On the Possibility of Constructing a Quantitative Paleoreconstruction of the Altai Mountains Climate Based on Scanning SR-XRF Data on the Bottom Sediments of Lower Multa. Journal of Surface Investigation-X-Ray Synchrotron and Neutron Techniques, 17(S1), S207-S211, https://doi.org/10.1134/S102745102307008X
Daryin, Andrei V; Kalugin, Ivan A; Maksimova, N V; Smolyaninova, Lyubov G; Zolotarev, K V (2005): Use of a scanning XRF analysis on SR beams from VEPP-3 storage ring for research of core bottom sediments from Teletskoe Lake with the purpose of high resolution quantitative reconstruction of last millennium paleoclimate. Nuclear Instruments & Methods in Physics Research Section A-Accelerators Spectrometers Detectors and Associated Equipment, 543(1), 255-258, https://doi.org/10.1016/j.nima.2005.01.217
Dmitriev, A (1980): Recognition of Images in Problems of Qualitative Forecasting of Ore Deposits. Novosibirsk: Nauka, 59–67
Hildebrandt, Steffi; Müller, Stefanie; Kalugin, Ivan A; Dar'in, Andrei V; Wagner, Mayke; Rogozin, Denis Y; Tarasov, Pavel E (2015): Tracing the North Atlantic decadal-scale climate variability in a late Holocene pollen record from southern Siberia. Palaeogeography, Palaeoclimatology, Palaeoecology, 426, 75-84, https://doi.org/10.1016/j.palaeo.2015.02.037
Kalugin, Ivan A; Astakhov, Anatolii S; Darin, Andrey V; Aksentov, Kirill (2015): Anomalies of bromine in the estuarine sediments as a signal of floods associated with typhoons. Chinese Journal of Oceanology and Limnology, 33(6), 1489-1495, https://doi.org/10.1007/s00343-015-4370-9
Kalugin, Ivan A; Darin, Andrey V; Rogozin, Denis Y; Tretyakov, G (2013): Seasonal and centennial cycles of carbonate mineralisation during the past 2500 years from varved sediment in Lake Shira, South Siberia. Quaternary International, 290-291, 245-252, https://doi.org/10.1016/j.quaint.2012.09.016
Kalugin, Ivan A; Daryin, Andrei V; Smolyaninova, Lyubov G; Andreev, Andrei A; Diekmann, Bernhard; Khlystov, Oleg (2007): 800-yr-long records of annual air temperature and precipitation over southern Siberia inferred from Teletskoye Lake sediments. Quaternary Research, 67(3), 400-410, https://doi.org/10.1016/j.yqres.2007.01.007
Karnaukh, V N; Astakhov, Anatoly S; Vereshchagina, O F; Tsoy, Ira B; Kosmach, Denis A; Sagalaev, Sergey G; Volkova, Tamara I; Dubina, Vyacheslav A; Prushkovskaya, Irina A (2016): Formation of subsurface shallow gas accumulations in Amurskiy Bay (Peter the Great Bay, Sea of Japan) as a result of postglacial sea-level change, paleoceanographic conditions and hydrological activity. Marine Geology, 372, 31-52, https://doi.org/10.1016/j.margeo.2015.12.004
Kuzmin, Yaroslav V; Burr, George S; Timothy Jull, A J (2001): Radiocarbon Reservoir Correction Ages in the Peter the Great Gulf, Sea of Japan, and Eastern Coast of the Kunashir, Southern Kuriles (Northwestern Pacific). Radiocarbon, 43(2A), 477-481, https://doi.org/10.1017/S0033822200038364
Reimer, Paula J; Bard, Edouard; Beck, J Warren; Blackwell, Paul G; Ramsey, Christopher Bronk; Buck, Caitlin E; Cheng, Hai; Edwards, R Lawrence; Friedrich, Michael; Grootes, Pieter Meiert; Guilderson, Thomas P; Haflidason, Haflidi; Hajdas, Irka; Hatte, Christine; Heaton, T J; Hoffmann, Dirk L; Hogg, Alan G; Hughen, Konrad A; Kaiser, Klaus-Felix; Kromer, Bernd; Manning, Sturt W; Niu, Mu; Reimer, Ron W; Richards, David A; Scott, Marian; Southon, John R; Staff, Richard A; Turney, Chris S M; van der Plicht, Johannes (2013): IntCal13 and Marine13 Radiocarbon Age Calibration Curves 0–50,000 Years cal BP. Radiocarbon, 55(4), 1869-1887, https://doi.org/10.2458/azu_js_rc.55.16947
Rudaya, Natalia; Nazarova, Larisa B; Novenko, Elena Y; Andreev, Andrei A; Kalugin, Ivan A; Daryin, Andrei V; Babich, Valeriy V; Li, Hong-Chun; Shilov, Pavel (2016): Quantitative reconstructions of mid- to late holocene climate and vegetation in the north-eastern Altai mountains recorded in lake Teletskoye. Global and Planetary Change, 141, 12-24, https://doi.org/10.1016/j.gloplacha.2016.04.002
Stuiver, Minze; Reimer, Paula J (1993): Extended 14C data base and revised CALIB 3.0 14C age calibration program. Radiocarbon, 35(1), 215-230, https://doi.org/10.1017/S0033822200013904
Tishchenko, P P; Tishchenko, P Ya; Zvalinskii, V I; Sergeev, A F (2011): The carbonate system of Amur Bay (sea of Japan) under conditions of hypoxia. Oceanology, 51(2), 235-246, https://doi.org/10.1134/S0001437011020172
Funding:
Russian Science Foundation, grant/award no. 25-27-20098: Forecast of climate changes in the South Primorsky Krai based on periodic natural processes manifested in the chemical composition of Amur Bay bottom sediments
Coverage:
Latitude: 43.124550 * Longitude: 131.827030
Minimum Elevation: -33.0 m * Maximum Elevation: -33.0 m
Event(s):
LV66-3 * Latitude: 43.124550 * Longitude: 131.827030 * Elevation: -33.0 m * Recovery: 466 cm * Location: Amur Bay * Campaign: LV66 * Basis: Akademik M.A. Lavrentyev * Method/Device: Gravity corer (GC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1AgeAgea AD/CEAlatortsev, Alexander
2AGEAgeka BPAlatortsev, AlexanderGeocode
3PotassiumKmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
4CalciumCamg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
5TitaniumTimg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
6VanadiumVmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
7ChromiumCrmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
8ManganeseMnmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
9IronFemg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
10NickelNimg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
11CopperCumg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
12GalliumGamg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
13ArsenicAsmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
14BromineBrmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
15RubidiumRbmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
16StrontiumSrmg/gAlatortsev, AlexanderCorrectedwithout diagenetic layers
17Potassium/Rubidium ratioK/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
18Calcium/Rubidium ratioCa/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
19Titanium/Rubidium ratioTi/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
20Vanadium/Rubidium ratioV/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
21Chromium/Rubidium ratioCr/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
22Manganese/Rubidium ratioMn/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
23Iron/Rubidium ratioFe/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
24Nickel/Rubidium ratioNi/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
25Copper/Rubidium ratioCu/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
26Gallium/Rubidium ratioGa/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
27Arsenic/Rubidium ratioAs/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
28Bromine/Rubidium ratioBr/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
29Strontium/Rubidium ratioSr/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb-normalised annual content (error corrected, without diagenetic layers)
30Potassium/Rubidium ratioK/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
31Calcium/Rubidium ratioCa/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
32Titanium/Rubidium ratioTi/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
33Vanadium/Rubidium ratioV/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
34Chromium/Rubidium ratioCr/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
35Manganese/Rubidium ratioMn/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
36Iron/Rubidium ratioFe/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
37Nickel/Rubidium ratioNi/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
38Copper/Rubidium ratioCu/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
39Gallium/Rubidium ratioGa/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
40Arsenic/Rubidium ratioAs/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
41Bromine/Rubidium ratioBr/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
42Strontium/Rubidium ratioSr/RbAlatortsev, AlexanderCalculated, decadal (11-year) averageaverage decadal (11-year) Rb and mini-max normalised annual elements content
43Temperature, air, annual meanMAAT°CAlatortsev, AlexanderCalculated, decadal (11-year) averagedecadal (11-year) average
44Temperature, air, summerT air sum°CAlatortsev, AlexanderCalculated, decadal (11-year) averagejun-sept, decadal (11-year) average
45Temperature, air, winterT air wint°CAlatortsev, AlexanderCalculated, decadal (11-year) averagedec-march, decadal (11-year) average
46Precipitation, monthly total, meanPrecip m tot meanmm/monthAlatortsev, AlexanderCorrecteddecadal (11 year) average
47Precipitation, summerPrecip summm/monthAlatortsev, AlexanderCorrectedjune-sept, decadal (11 year) average
48Precipitation, winterPrecip wintmm/monthAlatortsev, AlexanderCorrecteddec-march, decadal (11 year) average
49Temperature, air, annual mean, reconstructedT air annual mean reconst°CAlatortsev, AlexanderCalculated, decadal (11-year) averagedecadal (11-year) average
50Temperature, air, summer, reconstructedT air summer reconst°CAlatortsev, AlexanderCalculated, decadal (11-year) averagedecadal (11-year) average
51Temperature, air, winter, reconstructedT air winter reconst°CAlatortsev, AlexanderCalculated, decadal (11-year) averagedecadal (11-year) average
52Precipitation, monthly total, mean, reconstructedPrecip m tot mean reconstrmm/monthAlatortsev, AlexanderCalculated, decadal (11-year) averagedecadal (11-year) average
53Precipitation, summer, reconstructedPrecip summer reconstrmm/monthAlatortsev, AlexanderCalculated, decadal (11-year) averagedecadal (11-year) average
54Precipitation, winter, reconstructedPrecip winter reconstrmm/monthAlatortsev, AlexanderCalculated, decadal (11-year) averagedecadal (11-year) average
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
192081 data points

Download Data (login required; moratorium until 2026-05-21)

Download dataset as tab-delimited text — use the following character encoding:

View dataset as HTML (shows only first 2000 rows)