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Li, Xing; Song, Haijun; Tian, Li; Chen, Xiangmin; Sun, Xin; Yan, Jia; Jia, Enhao; Feng, Yan; Chu, Daoliang (2025): Seawater carbonate chemistry and gastropod shell dissolution and microstructure [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.982237 (DOI registration in progress)

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Published: 2025-04-30

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Abstract:
This study examines the shell growth, surface erosion, and microstructural changes of the marine gastropod Lunella coronata granulata after 85 days of exposure to varying pH (8.1–7.1).
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from tables in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-04-30.
Keyword(s):
Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Lunella coronata; Mollusca; North Pacific; Single species; Tropical
Related to:
Li, Xing; Song, Haijun; Tian, Li; Chen, Xiangmin; Sun, Xin; Yan, Jia; Jia, Enhao; Feng, Yan; Chu, Daoliang (2025): The impact of ocean acidification on gastropod shell dissolution and microstructure. Anthropocene, 50, 100470, https://doi.org/10.1016/j.ancene.2025.100470
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024
Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeSong, Haijun
2Species, unique identificationSpecies UIDSong, Haijun
3Species, unique identification (URI)Species UID (URI)Song, Haijun
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Song, Haijun
5Treatment: pHT:pHSong, Haijun
6IdentificationIDSong, HaijunBox
7Growth rateµmm/weekSong, HaijunShell
8RankRankSong, HaijunShell erosion
9ScoreScoreSong, HaijunShell erosion
10AreaArea%Song, HaijunShell light-colored
11Gray levelGLSong, HaijunShell average
12AreaArea%Song, HaijunShell dissolution
13pH, NBS scalepH NBSSong, Haijun
14pH, standard deviationpH std dev±Song, HaijunNBS scale
15Alkalinity, totalATµmol/kgSong, Haijun
16Alkalinity, total, standard deviationAT std dev±Song, Haijun
17Temperature, waterTemp°CSong, Haijun
18Temperature, water, standard deviationTemp std dev±Song, Haijun
19SalinitySalSong, Haijun
20Salinity, standard deviationSal std dev±Song, Haijun
21Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmSong, Haijun
22Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Song, Haijun
23Calcite saturation stateOmega CalSong, Haijun
24Calcite saturation state, standard deviationOmega Cal std dev±Song, Haijun
25Aragonite saturation stateOmega ArgSong, Haijun
26Aragonite saturation state, standard deviationOmega Arg std dev±Song, Haijun
27Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28pH, total scalepHTYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
612 data points

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