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Schmidt, Christiane; Puerto Rueda, Diana N; Nusser, Moritz; Oakley, Clinton A; Pochon, Xavier; Stuhr, Marleen; Raposo, Débora; Davy, Simon K (2025): File names of the images and videos recorded at the microscope from the Bleaching Ecophysiology Assessment experiment at final observations [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.974619, In: Schmidt, C et al. (2025): Menthol-DCMU bleaching experiments on two foraminifera species, Amphistegina lobifera and Sorites orbiculus [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.974618

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Published: 2025-03-18 • DOI registered: 2025-04-14

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Abstract:
This dataset contains epifluorescence images of individual foraminifera Sorites orbiculus and Amphistegina lobifera subjected to menthol and control treatments at both initial and final time points of a menthol-DCMU bleaching experiment. Additionally, the dataset includes videos capturing pseudopodial movement at the final time points to assess foraminiferal motility during observation.
Keyword(s):
Bleaching; coral reefs; endosymbiosis; Foraminifera; Laboratory experiment; Symbiodiniaceae; symbiont manipulation; symbiosis
Related to:
Schmidt, Christiane; Puerto Rueda, Diana N; Nusser, Moritz; Oakley, Clinton A; Pochon, Xavier; Stuhr, Marleen; Raposo, Débora; Davy, Simon K (accepted): A novel menthol-DCMU bleaching method for foraminifera: Generating aposymbiotic hosts for symbiosis research. biorxiv, Symbiosis, 2024.12.09.627035v1, https://doi.org/10.1101/2024.12.09.627035
Funding:
Deutsche Forschungsgemeinschaft, Bonn (DFG), grant/award no. 444059848: SYMBIOAID: the role of diatom endosymbionts on the adaptive potenital of benthic foraminifera to climate change
Coverage:
Median Latitude: 33.094267 * Median Longitude: 25.027883 * South-bound Latitude: 29.501866 * West-bound Longitude: 15.138278 * North-bound Latitude: 36.686667 * East-bound Longitude: 34.917488
Date/Time Start: 2019-11-18T00:00:00 * Date/Time End: 2019-12-17T00:00:00
Event(s):
A_lobifera_Italy * Latitude: 36.686667 * Longitude: 15.138278 * Date/Time: 2019-09-21T09:00:00 * Location: Capo Passero * Method/Device: Sampling by snorkeling (SNORKELING) * Comment: sampling depth: 0.5 m
S_orbiculus_Israel * Latitude: 29.501866 * Longitude: 34.917488 * Date/Time: 2019-09-22T16:00:00 * Location: Eilat * Method/Device: Sampling by snorkeling (SNORKELING) * Comment: sampling depth: 2 m; sample location: Inter-University Institute for Marine Sciences
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1 IdentificationIDSchmidt, ChristianeForams
2 Species, unique identificationSpecies UIDSchmidt, Christiane
3 Species, unique identification (Semantic URI)Species UID (Semantic URI)Schmidt, Christiane
4 Species, unique identification (URI)Species UID (URI)Schmidt, Christiane
5 TreatmentTreatSchmidt, Christiane
6 DATE/TIMEDate/TimeSchmidt, ChristianeGeocode
7 ImageIMAGESchmidt, Christiane
8 VideoVIDEOSchmidt, Christiane
9 Pseudopodia, presencePseudopodia presSchmidt, Christiane
10 Type of studyStudy typeSchmidt, Christiane
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
450 data points

Data

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1 
ID		2 
Species UID		3 
Species UID (Semantic URI)		4 
Species UID (URI)		5 
Treat		6 
Date/Time		7 
IMAGE		8 
VIDEO		9 
Pseudopodia pres		10 
Study type
AM_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-11-18AM6_1_I.tif0Laboratory experiment
AM_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-11-18AM6_2_I.tif0Laboratory experiment
AM_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-11-18AM6_3_I.tif0Laboratory experiment
AO_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-11-18AO6_1_I.tif0Laboratory experiment
AO_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-11-18AO6_2_I.tif0Laboratory experiment
AO_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-11-18AO6_3_I.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-11-18SM6_1_1_I.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-11-18SM6_1_2_I.tif0Laboratory experiment
SM_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-11-18SM6_2_1_I.tif1Laboratory experiment
SM_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-11-18SM6_2_2_I.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-11-18SM6_3_1_I.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-11-18SM6_3_2_I.tif0Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-11-18SO6_1_1_I.tif0Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-11-18SO6_1_2_I.tif0Laboratory experiment
SO_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-11-18SO6_2_1_I.tif0Laboratory experiment
SO_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-11-18SO6_2_2_I.tif0Laboratory experiment
SO_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-11-18SO6_3_1_I.tif0Laboratory experiment
SO_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-11-18SO6_3_2_I.tif0Laboratory experiment
AM_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-12-17AM6_1_1_F.tif0Laboratory experiment
AM_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-12-17AM6_1_2_F.tif0Laboratory experiment
AM_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-12-17AM6_2_1_F.tif0Laboratory experiment
AM_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-12-17AM6_2_2_F.tif0Laboratory experiment
AM_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-12-17AM6_3_1_F.tif0Laboratory experiment
AM_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-12-17AM6_3_2_F.tif0Laboratory experiment
AM_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgMenthol2019-12-17AM6_3_3_F.tif0Laboratory experiment
AO_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_1_1_F.tif0Laboratory experiment
AO_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_1_2_F.tif0Laboratory experiment
AO_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_1_3_F.tif0Laboratory experiment
AO_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_2_1_F.tif0Laboratory experiment
AO_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_2_2_F.tif0Laboratory experiment
AO_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_3_1_F.tif1Laboratory experiment
AO_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_3_2_F.tif0Laboratory experiment
AO_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_3_3_F.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_1_F.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_2_F.tif1Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_3_F.tif1Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_4_F.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_5_F.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_6_F.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_7_F.tif0Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_8_F.tif0Laboratory experiment
SM_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_2_1_F.tif0Laboratory experiment
SM_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_2_2_F.tif0Laboratory experiment
SM_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_2_3_F.tif0Laboratory experiment
SM_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_2_4_F.tif0Laboratory experiment
SM_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_2_5_F.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_3_1_F.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_3_2_F.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_3_3_F.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_3_4_F.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_3_5_F.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_3_6_F.tif0Laboratory experiment
SM_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_3_7_F.tif0Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_1_F.tif1Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_2_F.tif0Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_3_F.tif0Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_4_F.tif0Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_5_F.tif1Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_6_F.tif1Laboratory experiment
SO_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_2_1_F.tif0Laboratory experiment
SO_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_2_2_F.tif0Laboratory experiment
SO_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_2_3_F.tif0Laboratory experiment
SO_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_2_4_F.tif0Laboratory experiment
SO_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_3_1_F.tif0Laboratory experiment
SO_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_3_2_F.tif0Laboratory experiment
SO_6_3Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_3_3_F.tif0Laboratory experiment
AO_6_1Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_1_F.avi1Laboratory experiment
AO_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_2_1_F.avi1Laboratory experiment
AO_6_2Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_2_2_F.avi1Laboratory experiment
AO_6_3Amphistegina lobiferaurn:lsid:marinespecies.org:taxname:490083marinespecies.orgControl2019-12-17AO6_3_F.avi1Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_1_F.avi1Laboratory experiment
SM_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgMenthol2019-12-17SM6_1_2_F.avi1Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_1_F.avi1Laboratory experiment
SO_6_1Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_1_2_F.avi1Laboratory experiment
SO_6_2Sorites orbiculusurn:lsid:marinespecies.org:taxname:112823marinespecies.orgControl2019-12-17SO6_2_F.avi1Laboratory experiment