Rhodes, Linda D; Adams, Nicolaus G; Simon, Ramon Gallego; Kavanaugh, Maria; Alin, Simone R; Feely, Richard A (2024): Seawater carbonate chemistry and nearshore microbial communities of the Pacific Northwest coasts of Canada and the U.S [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.972609 (DOI registration in progress)
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Abstract:
A survey of marine pelagic coastal microbial communities was conducted over a large geographic latitude range, from Cape Mendocino in northern California USA to Queen Charlotte Sound in British Columbia Canada, during the spring to summer transition. DNA metabarcoding and flow cytometry were used to characterize microbial communities.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from NOAA's National Centers for Environmental Information (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-09-14.
Keyword(s):
Related to:
Rhodes, Linda D; Adams, Nicolaus G; Simon, Ramon Gallego; Kavanaugh, Maria; Alin, Simone R; Feely, Richard A (2024): Nearshore microbial communities of the Pacific Northwest coasts of Canada and the U.S. Frontiers in Marine Science, 11, 1430930, https://doi.org/10.3389/fmars.2024.1430930
Source:
Alin, Simone R; Feely, Richard A; Hales, Burke; Byrne, Robert H; Cochlan, William; Liu, Xuewu; Greeley, Dana (2017): Dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from profile and discrete sample observations using CTD, Niskin bottle, and other instruments from NOAA Ship Ronald H. Brown in the U.S. West Coast California Current System from 2016-05-08 to 2016-06-06 (NCEI Accession 0169412) [dataset]. NOAA National Centers for Environmental Information, https://doi.org/10.7289/V5V40SHG
Rhodes, Linda D; Adams, Nicolaus G; Alin, Simone R; Feely, Richard A (2022): Cellular abundances of bacterioplankton and eukaryotic picoplankton measured by flow cytometry in water samples collected on NOAA Ship Ronald H. Brown during the West Coast Ocean Acidification Cruise led by the Pacific Marine Environmental Laboratory (PMEL) in the northern California current ecosystem from 2016-05-24 to 2016-06-16 (NCEI Accession 0265154) [dataset]. NOAA National Centers for Environmental Information, https://www.ncei.noaa.gov/archive/accession/0265154
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Coverage:
Median Latitude: 46.916708 * Median Longitude: -125.118510 * South-bound Latitude: 40.246300 * West-bound Longitude: -129.449800 * North-bound Latitude: 52.399200 * East-bound Longitude: -123.912200
Minimum DEPTH, water: 3 m * Maximum DEPTH, water: 250 m
Parameter(s):
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
3865 data points
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