Citation:

PANGAEA.972405 (DOI registration in progress)

Name: Seawater carbonate chemistry and standard metabolic rate, clearance rate, survivorship and growth of Argopecten irradians
Published: 2024
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Argopecten irradians; Behaviour; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mollusca; Mortality/Survival; North Atlantic; Other; Respiration; Single species; Temperate

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Abstract:

In this study, juvenile northern bay scallops Argopecten irradians (Lamarck) that had been reared since 4 h post-fertilization under one of 2 OA conditions (~500–600 or ~750–850 μatm pCO2; ~1.37–1.5 or ~1.0–1.2 Ωaragonite), were subjected to 2 food levels for 42 d (low food: ~400, high food: ~1400 chlorophyll cells ml–1). Standard metabolic rate (SMR) and clearance rate (CR) were measured on Day 0, and SMR, CR, growth, and survivorship were measured at 14 and 42 days of exposure to 2 food levels for each of the OA treatments.

This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from National Centers for Environmental Information (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-09-09.

Keyword(s):

Animalia; Argopecten irradians; Behaviour; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mollusca; Mortality/Survival; North Atlantic; Other; Respiration; Single species; Temperate

Related to:

Gurr, Samuel J; McFarland, Katherine; Bernatchez, Genevieve; Dixon, Mark S; Guy, Lisa; Milke, Lisa; Poach, Matthew E; Hart, Deborah R; Plough, Louis V; Redman, Dylan H; Sennefelder, George; Stiles, Sheila; Wikfors, Gary H; Padilla, Dianna K; Meseck, Shannon (2024): Effects of food supply on northern bay scallops Argopecten irradians reared under two pCO2 conditions. Marine Ecology Progress Series, 740, 61-78, https://doi.org/10.3354/meps14624

Source:

Gurr, Samuel J; McFarland, Katherine; Bernatchez, Genevieve; Dixon, Mark S; Guy, Lisa; Milke, Lisa; Poach, Matthew E; Hart, Deborah R; Plough, Louis V; Redman, Dylan H; Sennefelder, George; Stiles, Sheila; Wikfors, Gary H; Padilla, Dianna K; Meseck, Shannon (2024): Effects of food supply on northern bay scallops (Argopecten irradians) reared under two pCO2 conditions from 2021-09-14 to 2021-10-26 (NCEI Accession 0289954) [dataset]. NOAA National Centers for Environmental Information, https://doi.org/10.25921/RNT3-6G61

References:

Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010

Related code / software:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Latitude: 41.655100 * Longitude: -70.638300

Date/Time Start: 2021-05-01T00:00:00 * Date/Time End: 2021-05-31T00:00:00

Event(s):

Megansett_Harbor * Latitude: 41.655100 * Longitude: -70.638300 * Date/Time Start: 2021-05-01T00:00:00 * Date/Time End: 2021-05-31T00:00:00

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type of study	Study type		Meseck, Shannon
2	Species, unique identification	Species UID		Meseck, Shannon
3	Species, unique identification (URI)	Species UID (URI)		Meseck, Shannon
4	Species, unique identification (Semantic URI)	Species UID (Semantic URI)		Meseck, Shannon
5	Date	Date		Meseck, Shannon
6	Treatment	Treat		Meseck, Shannon
7	Treatment	Treat		Meseck, Shannon
8	Replicate	Repl		Meseck, Shannon
9	Counts	Counts	#	Meseck, Shannon		live juvenile bay scallops
10	Survival probability	Survival Prob		Meseck, Shannon
11	Shell length	Shell l	mm	Meseck, Shannon
12	Mass	Mass	mg	Meseck, Shannon		Tin weight
13	Group	Group		Meseck, Shannon		Shell_or_tissue
14	Mass	Mass	mg	Meseck, Shannon		Dry sample and tin weight
15	Mass	Mass	mg	Meseck, Shannon		Dry sample weight
16	Ash mass	Ash m	mg	Meseck, Shannon
17	Ash free dry mass	afdm	mg	Meseck, Shannon
18	Identification	ID		Meseck, Shannon		Channel
19	Run	Run		Meseck, Shannon
20	Plate	Plate		Meseck, Shannon
21	Identification	ID		Meseck, Shannon		Number
22	Volume	Vol	ml	Meseck, Shannon
23	Standard metabolic rate, normalized	SMR norm	µmol/mm/h	Meseck, Shannon
24	Time in days	Time	days	Meseck, Shannon
25	Counts	Counts	#	Meseck, Shannon		Chaetoceros neogracile
26	Counts	Counts	#	Meseck, Shannon		Tetraselmis chui
27	Counts	Counts	#	Meseck, Shannon		Low chlorophyll
28	Cell density	Cells	#/ml	Meseck, Shannon		Chaetoceros neogracile
29	Cell density	Cells	#/ml	Meseck, Shannon		Tetraselmis chui
30	Cell density	Cells	#/ml	Meseck, Shannon		Low chlorophyll
31	Length	l	µm	Meseck, Shannon
32	Replicates	Repl	#	Meseck, Shannon
33	Temperature, water	Temp	°C	Meseck, Shannon
34	Temperature, water, standard error	T std e	±	Meseck, Shannon
35	Salinity	Sal		Meseck, Shannon
36	Salinity, standard error	Sal std e	±	Meseck, Shannon
37	Oxygen, dissolved	DO	mg/l	Meseck, Shannon
38	Oxygen, dissolved, standard error	DO std e	±	Meseck, Shannon
39	pH	pH		Meseck, Shannon
40	pH, standard error	pH std e	±	Meseck, Shannon
41	Carbon, inorganic, dissolved	DIC	µmol/kg	Meseck, Shannon
42	Carbon, inorganic, dissolved, standard error	DIC std e	±	Meseck, Shannon
43	Alkalinity, total	AT	µmol/kg	Meseck, Shannon
44	Alkalinity, total, standard error	AT std e	±	Meseck, Shannon
45	pH	pH		Meseck, Shannon	Calculated using CO2SYS	seawater scale
46	pH, standard error	pH std e	±	Meseck, Shannon	Calculated using CO2SYS	seawater scale
47	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Meseck, Shannon	Calculated using CO2SYS
48	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error	pCO2water_SST_wet std e	±	Meseck, Shannon	Calculated using CO2SYS
49	Aragonite saturation state	Omega Arg		Meseck, Shannon	Calculated using CO2SYS
50	Aragonite saturation state, standard error	Omega Arg std e	±	Meseck, Shannon	Calculated using CO2SYS
51	Calcite saturation state	Omega Cal		Meseck, Shannon	Calculated using CO2SYS
52	Calcite saturation state, standard error	Omega Cal std e	±	Meseck, Shannon	Calculated using CO2SYS
53	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
54	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale
55	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
56	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
57	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
58	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
59	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
60	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
61	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Size:

56100 data points

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