Thangal, Said Hamid; Nandhinipriya, Ramamoorthy; Vasuki, Chandrasekaran; Gayathri, Velusamy; Anandhan, Krishnan; Yogeshwaran, Arumugam; Muralisankar, T; Ramesh, Mathan; Rajaram, Rajendiran; Santhanam, P; Maran, Balu Alagar Venmathi (2024): Seawater carbonate chemistry and biological indices and oxidative stress responses of marine crab Scylla serrata to the impact of ocean acidification and cadmium toxicity [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.969125 (DOI registration in progress)
Always quote citation above when using data! You can download the citation in several formats below.
Abstract:
In the current study, the effect of OA on the toxicity of cadmium (Cd) in the crab Scylla serrata was evaluated. Crab instars (0.07 cm length and 0.1 g weight) were subjected to pH 8.2, 7.8, 7.6, 7.4, 7.2, and 7.0 with and without 0.01 mg l−1 of Cd for 60 days.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-06-19.
Keyword(s):
Animalia; Arthropoda; Behaviour; Benthic animals; Benthos; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Inorganic toxins; Laboratory experiment; Laboratory strains; Mortality/Survival; Not applicable; Other metabolic rates; Other studied parameter or process; Scylla serrata; Single species
Related to:
Thangal, Said Hamid; Nandhinipriya, Ramamoorthy; Vasuki, Chandrasekaran; Gayathri, Velusamy; Anandhan, Krishnan; Yogeshwaran, Arumugam; Muralisankar, T; Ramesh, Mathan; Rajaram, Rajendiran; Santhanam, P; Maran, Balu Alagar Venmathi (2023): The impact of ocean acidification and cadmium toxicity in the marine crab Scylla serrata: Biological indices and oxidative stress responses. Chemosphere, 345, 140447, https://doi.org/10.1016/j.chemosphere.2023.140447
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Parameter(s):
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
1044 data points
Data
1 Study type | 2 Species UID | 3 Species UID (URI) | 4 Species UID (Semantic URI) | 5 Treat | 6 T:pH | 7 Survival [%] | 8 Survival rate std dev [±] | 9 l [cm] (gain, final length-initial le...) | 10 l std dev [±] (gain, final length-initial le...) | 11 Mass chn [g] (gain, final mass-initial mass) | 12 Mass chn std dev [±] (gain, final mass-initial mass) | 13 l [cm] (Final) | 14 l std dev [±] (Final) | 15 Mass [g] (Final) | 16 Mass std dev [±] (Final) | 17 SGR [%/day] | 18 SGR std dev [±] | 19 Molt/day [#/day] | 20 Molt/day std dev [±] | 21 Feed intake/crab [g/#/day] | 22 Feed intake std dev [±] | 23 FCR | 24 FCR std dev [±] | 25 SOD/prot [U/mg] | 26 SOD std dev [±] | 27 CAT/prot [µmol/min/mg] | 28 CAT std dev [±] | 29 LPO/prot [nmol/mg] | 30 LPO/prot std dev [±] | 31 PTR [mg/g] | 32 Protein std dev [±] | 33 CHO tot [µg/g] | 34 CHO tot std dev [±] | 35 AA [µg/g] | 36 AA std dev [±] | 37 Lipids tot [µg/g] | 38 Lipids tot std dev [±] | 39 GOT act [U/ml] | 40 GOT act std dev [±] | 41 GPT act [U/ml] | 42 GPT act std dev [±] | 43 ALP/prot [mmol/mg/min] | 44 ALKP A std dev [±] | 45 Cd [µg/l] (in seawater) | 46 Cd std dev [±] (in seawater) | 47 Cd [µg/l] (in crab tissue) | 48 Cd std dev [±] (in crab tissue) | 49 Hemocytes [#/ml] | 50 Hemocytes std dev [±] | 51 Sal | 52 Sal std dev [±] | 53 Temp [°C] | 54 Temp std dev [±] | 55 pH (total scale) | 56 pH std dev [±] (total scale) | 57 DO [ml/l] | 58 DO std dev [±] | 59 AT [µmol/kg] | 60 AT std dev [±] | 61 DIC [µmol/kg] | 62 DIC std dev [±] | 63 pCO2water_SST_wet [µatm] | 64 pCO2 std dev [±] | 65 [HCO3]- [µmol/kg] | 66 [HCO3]- std dev [±] | 67 [CO3]2- [µmol/kg] | 68 [CO3]2- std dev [±] | 69 Omega Cal | 70 Omega Cal std dev [±] | 71 Omega Arg | 72 Omega Arg std dev [±] | 73 CSC flag (Calculated using seacarb afte...) | 74 CO2 [µmol/kg] (Calculated using seacarb afte...) | 75 CO2 std dev [±] (Calculated using seacarb afte...) | 76 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...) | 77 fCO2 std dev [±] (Calculated using seacarb afte...) | 78 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...) | 79 pCO2 std dev [±] (Calculated using seacarb afte...) | 80 [HCO3]- [µmol/kg] (Calculated using seacarb afte...) | 81 [HCO3]- std dev [±] (Calculated using seacarb afte...) | 82 [CO3]2- [µmol/kg] (Calculated using seacarb afte...) | 83 [CO3]2- std dev [±] (Calculated using seacarb afte...) | 84 DIC [µmol/kg] (Calculated using seacarb afte...) | 85 DIC std dev [±] (Calculated using seacarb afte...) | 86 Omega Arg (Calculated using seacarb afte...) | 87 Omega Arg std dev [±] (Calculated using seacarb afte...) | 88 Omega Cal (Calculated using seacarb afte...) | 89 Omega Cal std dev [±] (Calculated using seacarb afte...) |
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laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA | 8.2 | 100.00 | 0.00 | 1.82 | 0.08 | 2.09 | 0.35 | 2.52 | 0.08 | 2.19 | 0.34 | 2.22 | 0.12 | 0.98 | 0.17 | 1.81 | 0.36 | 0.86 | 0.03 | 3.00 | 0.19 | 8.19 | 0.11 | 1.30 | 0.20 | 253.46 | 4.48 | 0.09103 | 0.00198 | 0.21285 | 0.00426 | 0.02211 | 0.00335 | 14.13 | 2.47 | 43.10 | 2.53 | 1.96 | 0.64 | 0.22 | 0.01 | 0.12 | 0.01 | 12250000 | 10000 | 34.2 | 0.78 | 24.50 | 0.50 | 8.20 | 0.02 | 7.93 | 1.50 | 2004.86 | 5.76 | 1650.68 | 14.19 | 216.25 | 13.59 | 1407.81 | 26.06 | 236.63 | 12.37 | 5.74 | 0.29 | 3.76 | 0.20 | 8 | 6.38 | 0.42 | 220.95 | 14.07 | 221.66 | 14.12 | 1414.37 | 26.17 | 233.67 | 10.56 | 1654.41 | 16.74 | 3.72 | 0.24 | 5.66 | 0.36 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA+Cd | 8.2 | 98.75 | 2.50 | 1.36 | 0.25 | 1.75 | 0.26 | 2.20 | 0.20 | 1.85 | 0.26 | 2.10 | 0.09 | 0.86 | 0.83 | 1.47 | 0.63 | 0.80 | 0.20 | 3.33 | 0.04 | 9.13 | 0.04 | 1.50 | 0.31 | 224.44 | 3.71 | 0.08447 | 0.00487 | 0.18435 | 0.00406 | 0.02186 | 0.00039 | 15.92 | 2.48 | 58.14 | 0.74 | 2.28 | 0.60 | 10.13 | 0.06 | 0.47 | 0.00 | 11160000 | 10000 | 34.0 | 0.71 | 24.55 | 0.03 | 8.20 | 0.01 | 7.93 | 0.64 | 2001.53 | 5.79 | 1646.49 | 7.21 | 215.37 | 7.69 | 1403.48 | 14.21 | 236.80 | 7.24 | 5.77 | 0.14 | 3.77 | 0.10 | 8 | 6.38 | 0.24 | 221.02 | 8.16 | 221.73 | 8.19 | 1413.44 | 18.22 | 232.85 | 7.60 | 1652.67 | 11.87 | 3.71 | 0.21 | 5.65 | 0.31 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA | 7.8 | 98.75 | 2.50 | 1.74 | 0.05 | 1.81 | 0.06 | 2.44 | 0.05 | 1.91 | 0.06 | 2.13 | 0.02 | 0.86 | 0.26 | 1.70 | 0.43 | 0.94 | 0.20 | 3.21 | 0.02 | 8.25 | 0.05 | 1.60 | 0.37 | 246.86 | 4.47 | 0.08193 | 0.00269 | 0.17090 | 0.00364 | 0.01886 | 0.00058 | 17.75 | 3.65 | 47.95 | 0.69 | 1.19 | 0.59 | 0.22 | 0.00 | 0.13 | 0.01 | 9980000 | 10000 | 34.2 | 0.78 | 24.50 | 0.50 | 7.80 | 0.04 | 7.73 | 1.29 | 1998.20 | 9.99 | 1847.76 | 6.29 | 677.94 | 51.24 | 1715.82 | 14.08 | 112.38 | 9.57 | 2.72 | 0.23 | 1.78 | 0.15 | 8 | 19.43 | 2.10 | 672.74 | 72.04 | 674.91 | 72.27 | 1714.42 | 26.07 | 112.76 | 9.88 | 1846.60 | 19.27 | 1.79 | 0.18 | 2.73 | 0.27 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA+Cd | 7.8 | 97.50 | 2.88 | 1.14 | 0.19 | 1.41 | 0.22 | 2.02 | 0.08 | 1.51 | 0.22 | 1.96 | 0.09 | 0.76 | 0.83 | 1.34 | 0.60 | 0.92 | 0.02 | 3.76 | 0.05 | 9.87 | 0.05 | 2.22 | 0.34 | 202.76 | 1.51 | 0.08194 | 0.00457 | 0.15753 | 0.00414 | 0.01803 | 0.00319 | 28.89 | 2.86 | 58.78 | 0.96 | 1.71 | 0.24 | 10.12 | 0.02 | 0.68 | 0.01 | 9260000 | 10000 | 34.0 | 0.71 | 24.55 | 0.03 | 7.79 | 0.04 | 7.80 | 0.70 | 1994.87 | 5.76 | 1847.70 | 9.52 | 694.43 | 56.30 | 1717.35 | 16.34 | 110.34 | 8.51 | 2.67 | 0.19 | 1.75 | 0.12 | 8 | 19.93 | 2.13 | 690.48 | 73.66 | 692.71 | 73.90 | 1717.93 | 24.10 | 110.10 | 9.49 | 1847.97 | 17.10 | 1.75 | 0.17 | 2.67 | 0.26 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA | 7.6 | 98.75 | 2.50 | 1.32 | 0.13 | 1.66 | 0.14 | 2.02 | 0.13 | 1.76 | 0.14 | 2.07 | 0.05 | 0.81 | 0.26 | 1.67 | 0.44 | 0.99 | 0.18 | 3.32 | 0.02 | 8.36 | 0.07 | 1.78 | 0.47 | 237.98 | 2.58 | 0.07715 | 0.00273 | 0.14131 | 0.00389 | 0.01807 | 0.00084 | 19.97 | 1.67 | 48.88 | 1.34 | 1.14 | 0.50 | 0.23 | 0.01 | 0.14 | 0.00 | 9890000 | 20000 | 34.2 | 0.78 | 24.50 | 0.50 | 7.61 | 0.03 | 7.56 | 3.07 | 1991.54 | 15.26 | 1908.30 | 5.46 | 1100.43 | 47.74 | 1800.47 | 2.09 | 76.08 | 5.44 | 1.84 | 0.13 | 1.20 | 0.08 | 8 | 31.58 | 2.51 | 1093.58 | 85.76 | 1097.10 | 86.04 | 1799.35 | 19.76 | 76.41 | 5.67 | 1907.34 | 18.32 | 1.22 | 0.11 | 1.85 | 0.16 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA+Cd | 7.6 | 95.00 | 0.00 | 1.26 | 0.11 | 1.31 | 0.28 | 1.96 | 0.11 | 1.41 | 0.28 | 1.90 | 0.14 | 0.68 | 0.83 | 1.29 | 0.71 | 0.99 | 0.32 | 3.92 | 0.05 | 10.95 | 0.07 | 2.25 | 0.34 | 195.15 | 2.44 | 0.07559 | 0.00540 | 0.13929 | 0.00343 | 0.01601 | 0.00270 | 29.21 | 4.14 | 58.98 | 2.20 | 1.47 | 0.77 | 10.14 | 0.04 | 0.70 | 0.00 | 8360000 | 10000 | 34.0 | 0.71 | 24.55 | 0.03 | 7.60 | 0.03 | 7.07 | 0.67 | 1988.21 | 9.99 | 1904.38 | 2.48 | 1099.17 | 82.55 | 1796.44 | 6.32 | 76.29 | 6.34 | 1.84 | 0.14 | 1.21 | 0.09 | 8 | 32.36 | 2.53 | 1121.07 | 87.46 | 1124.68 | 87.74 | 1800.88 | 16.05 | 74.52 | 5.36 | 1907.76 | 14.14 | 1.19 | 0.10 | 1.81 | 0.15 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA | 7.4 | 97.50 | 2.88 | 1.22 | 0.16 | 1.39 | 0.06 | 1.92 | 0.16 | 1.49 | 0.06 | 1.95 | 0.02 | 0.80 | 0.39 | 1.61 | 0.36 | 1.15 | 0.21 | 3.64 | 0.05 | 9.33 | 0.05 | 1.99 | 0.48 | 217.57 | 3.01 | 0.07205 | 0.00518 | 0.12893 | 0.00464 | 0.01682 | 0.00028 | 20.71 | 5.13 | 48.84 | 1.15 | 0.78 | 0.08 | 0.22 | 0.01 | 0.16 | 0.01 | 8360000 | 10000 | 34.2 | 0.78 | 24.50 | 0.50 | 7.41 | 0.03 | 7.13 | 1.86 | 1988.21 | 9.99 | 1962.37 | 1.81 | 1761.49 | 77.20 | 1860.79 | 1.25 | 50.76 | 3.60 | 1.22 | 0.08 | 0.80 | 0.05 | 8 | 51.81 | 3.98 | 1794.29 | 136.19 | 1800.08 | 136.63 | 1862.77 | 13.34 | 49.91 | 3.82 | 1964.49 | 13.70 | 0.79 | 0.07 | 1.21 | 0.11 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA+Cd | 7.4 | 93.75 | 2.50 | 1.06 | 0.11 | 1.11 | 0.06 | 1.76 | 0.11 | 1.21 | 0.06 | 1.80 | 0.03 | 0.65 | 0.84 | 1.21 | 0.60 | 1.14 | 0.49 | 4.37 | 0.05 | 11.50 | 0.24 | 2.39 | 0.35 | 172.99 | 2.97 | 0.06141 | 0.00383 | 0.12271 | 0.00414 | 0.01554 | 0.00339 | 29.42 | 4.25 | 59.12 | 2.29 | 0.83 | 0.13 | 10.35 | 0.29 | 0.85 | 0.00 | 7930000 | 20000 | 34.0 | 0.71 | 24.55 | 0.03 | 7.40 | 0.03 | 6.83 | 0.59 | 1981.55 | 15.26 | 1958.09 | 4.61 | 1799.82 | 124.99 | 1856.51 | 4.01 | 48.76 | 5.96 | 1.20 | 0.10 | 0.79 | 0.07 | 8 | 52.96 | 4.03 | 1834.66 | 139.42 | 1840.58 | 139.87 | 1859.55 | 16.99 | 48.55 | 3.63 | 1961.07 | 17.79 | 0.77 | 0.07 | 1.18 | 0.10 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA | 7.2 | 93.75 | 2.50 | 1.10 | 0.15 | 1.10 | 0.06 | 1.80 | 0.15 | 1.20 | 0.06 | 1.80 | 0.04 | 0.75 | 0.36 | 1.46 | 0.56 | 1.31 | 0.44 | 4.36 | 0.05 | 11.51 | 0.08 | 2.36 | 0.15 | 180.94 | 4.38 | 0.06213 | 0.00388 | 0.11195 | 0.00339 | 0.01420 | 0.00048 | 26.86 | 1.42 | 50.18 | 0.95 | 0.32 | 13.00 | 0.22 | 0.01 | 0.18 | 0.01 | 8260000 | 10000 | 34.2 | 0.78 | 24.50 | 0.50 | 7.21 | 0.02 | 6.86 | 1.53 | 1978.22 | 19.98 | 2010.96 | 12.10 | 2844.43 | 105.55 | 1896.26 | 13.74 | 32.65 | 2.53 | 0.79 | 0.06 | 0.51 | 0.04 | 8 | 83.65 | 4.48 | 2896.95 | 151.61 | 2906.31 | 152.10 | 1897.61 | 19.89 | 32.08 | 1.97 | 2013.34 | 21.63 | 0.51 | 0.04 | 0.78 | 0.06 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA+Cd | 7.2 | 90.00 | 4.08 | 0.98 | 0.13 | 0.99 | 0.09 | 1.72 | 0.13 | 1.09 | 0.09 | 1.73 | 0.06 | 0.60 | 0.82 | 1.20 | 0.78 | 1.16 | 0.68 | 4.78 | 0.05 | 12.86 | 0.10 | 2.47 | 0.36 | 158.65 | 3.18 | 0.05954 | 0.00209 | 0.11159 | 0.00443 | 0.01135 | 0.00216 | 29.62 | 2.74 | 59.21 | 0.79 | 0.35 | 0.08 | 10.18 | 0.01 | 1.05 | 0.00 | 7640000 | 10000 | 34.0 | 0.71 | 24.55 | 0.03 | 7.20 | 0.03 | 6.57 | 0.35 | 1968.22 | 9.99 | 2000.34 | 0.57 | 2832.22 | 198.86 | 1886.16 | 2.62 | 32.63 | 2.87 | 0.78 | 0.06 | 0.51 | 0.04 | 8 | 85.31 | 6.35 | 2955.32 | 219.51 | 2964.86 | 220.22 | 1889.98 | 11.28 | 31.14 | 2.37 | 2006.43 | 14.05 | 0.50 | 0.04 | 0.76 | 0.07 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA | 7.0 | 91.25 | 4.78 | 1.02 | 0.19 | 1.01 | 0.06 | 1.78 | 0.19 | 1.11 | 0.06 | 1.74 | 0.04 | 0.66 | 0.24 | 1.39 | 0.43 | 1.36 | 0.35 | 4.59 | 0.05 | 12.00 | 0.06 | 3.54 | 0.12 | 170.50 | 2.24 | 0.05566 | 0.00494 | 0.10739 | 0.00479 | 0.01124 | 0.00103 | 30.18 | 2.43 | 50.11 | 2.11 | 0.19 | 0.09 | 0.21 | 0.00 | 0.19 | 0.00 | 7340000 | 10000 | 34.2 | 0.78 | 24.50 | 0.50 | 7.03 | 0.02 | 6.70 | 2.63 | 1971.55 | 5.76 | 2067.91 | 3.96 | 4456.88 | 193.12 | 1918.03 | 2.02 | 21.31 | 1.52 | 0.51 | 0.03 | 0.33 | 0.22 | 8 | 127.95 | 6.65 | 4431.34 | 225.22 | 4445.68 | 225.95 | 1917.79 | 6.47 | 21.42 | 1.32 | 2067.17 | 10.26 | 0.34 | 0.03 | 0.52 | 0.04 |
laboratory | Scylla serrata | marinespecies.org | urn:lsid:marinespecies.org:taxname:208814 | OA+Cd | 7.0 | 90.00 | 5.77 | 0.92 | 0.08 | 0.82 | 0.06 | 1.62 | 0.08 | 0.92 | 0.06 | 1.60 | 0.04 | 0.50 | 0.87 | 1.14 | 0.67 | 1.29 | 0.73 | 5.64 | 0.09 | 15.46 | 0.27 | 3.77 | 0.19 | 135.82 | 1.97 | 0.05542 | 0.00295 | 0.10599 | 0.00225 | 0.00980 | 0.00125 | 31.81 | 3.31 | 59.64 | 0.97 | 0.22 | 0.08 | 10.18 | 0.00 | 1.31 | 0.00 | 7270000 | 20000 | 34.0 | 0.71 | 24.55 | 0.03 | 7.01 | 0.02 | 6.43 | 0.21 | 1961.56 | 5.76 | 2060.76 | 3.15 | 4539.66 | 215.33 | 1909.25 | 2.25 | 20.64 | 1.38 | 0.50 | 0.03 | 0.33 | 0.02 | 8 | 133.58 | 6.79 | 4627.11 | 234.58 | 4642.08 | 235.35 | 1910.57 | 6.33 | 20.32 | 1.19 | 2064.46 | 10.24 | 0.32 | 0.02 | 0.49 | 0.04 |