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Cossa, Damboia; Infantes, Eduardo; Dupont, Sam (2024): Seawater carbonate chemistry and mortality, growth, and net calcification rates of sea urchin Echinus esculentus [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.969034 (DOI registration in progress)

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Abstract:
Here we evaluate the biological response (mortality, growth and net calcification rates) of a marine calcifier, the larvae of the sea urchin Echinus esculentus, to different levels of variability of pCO2/pH imposed in the absence or presence of seagrass and under 4 different pHs, relevant in the context of present natural variability and future ocean acidification.
This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were provided by the author of the related paper (see Related to) to the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-06-14.
Keyword(s):
Animalia; Calcification/Dissolution; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Echinodermata; Echinus esculentus; Growth/Morphology; Laboratory experiment; Mortality/Survival; North Atlantic; Other; Pelagos; Single species; Species interaction; Temperate; Zooplankton
Related to:
Cossa, Damboia; Infantes, Eduardo; Dupont, Sam (2024): Hidden cost of pH variability in seagrass beds on marine calcifiers under ocean acidification. Science of the Total Environment, 915, 170169, https://doi.org/10.1016/j.scitotenv.2024.170169
References:
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Type of studyStudy typeCossa, Damboia
2Species, unique identificationSpecies UIDCossa, Damboia
3Species, unique identification (URI)Species UID (URI)Cossa, Damboia
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Cossa, Damboia
5Treatment: pHT:pHCossa, Damboia
6pHpHCossa, Damboiatotal scale
7HabitatHabitatCossa, Damboia
8MortalityMortality1/dayCossa, Damboia
9Body lengthBLµmCossa, Damboiagrowth, per log day
10Net calcification rateNCRµm/hCossa, Damboia
11CycleCyCossa, Damboia
12SalinitySalCossa, Damboia
13Temperature, waterTemp°CCossa, Damboia
14Temperature, water, standard errorT std e±Cossa, Damboia
15pHpHCossa, DamboiaPotentiometrictotal scale, mean
16pH, standard errorpH std e±Cossa, DamboiaPotentiometrictotal scale
17Oxygen, dissolvedDOmg/lCossa, Damboiamean
18Oxygen, dissolved, standard errorDO std e±Cossa, Damboia
19Alkalinity, totalATµmol/kgCossa, DamboiaPotentiometric titrationmean
20Alkalinity, total, standard errorAT std e±Cossa, DamboiaPotentiometric titration
21Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCossa, DamboiaCalculated using CO2SYSmean
22Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Cossa, DamboiaCalculated using CO2SYS
23Calcite saturation stateOmega CalCossa, DamboiaCalculated using CO2SYSmean
24Calcite saturation state, standard errorOmega Cal std e±Cossa, DamboiaCalculated using CO2SYS
25Aragonite saturation stateOmega ArgCossa, DamboiaCalculated using CO2SYSmean
26Aragonite saturation state, standard errorOmega Arg std e±Cossa, DamboiaCalculated using CO2SYS
27Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
1889 data points

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