Canesi, Marine; Douville, Eric; Montagna, Paolo; Taviani, Marco; Stolarski, J; Bordier, Louise; Dapoigny, Arnaud; Coulibaly, Gninwoyo Eric Hermann; Simon, Anne‑Catherine; Agelou, Mathieu; Fin, Jonathan; Metzl, Nicolas; Iwankow, Guillaume; Allemand, Denis; Planes, Serge; Moulin, Clémentine; Lombard, Fabien; Bourdin, Guillaume; Troublé, Romain; Agostini, Sylvain; Banaigs, Bernard; Boissin, Emilie; Boss, Emmanuel; Bowler, Chris; De Vargas, Colomban; Flores, M; Forcioli, Didier; Furla, Paola; Gilson, Eric; Galand, Pierre E; Pesant, Stephane; Sunagawa, Shinichi; Thomas, Olivier P; Thurber, Rebecca Vega; Voolstra, Christian R; Wincker, Patrick; Zoccola, Didier; Reynaud, Stéphanie (2024): Seawater carbonate chemistry and skeletal isotopic composition and calcifying fuid composition in co-occurring Porites and Diploastrea specimens across the Pacifc ocean [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.967154
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Abstract:
The Tara Pacifc expedition (2016–2018) provided an opportunity to investigate calcifcation patterns in extant corals throughout thePacifc Ocean. Cores from colonies of the massive Porites and Diploastrea genera were collected fromdiferent environments to assess calcifcation parameters of long-lived reef-building corals. In this study, we compared the calcifcation and carbonate chemistryup-regulation of Diploastrea heliopora and Porites corals from across a range of environments. To this, we analyzed the skeletal geochemistry and growth parameters of 39 colonies of Porites (n=33) and Diploastrea (n=6) collected across the tropical Pacifc Ocean during the Tara Pacifc expedition (2016–2018). Te collected corals represent a suite of cores exposed to various hydrological conditions of seawater temperature (SST: 22.4–29.8 °C), salinity (SSS: 31.5–36.1), and carbonate chemistry (total scale pHsw: 8.01–8.09). Te average chemical composition of the calcifying fuid (pHcf, [CO32−]cf, DICcf, Ωcf) was derived from paired boron isotope (δ11B) and B/Ca analyses of core-top samples corresponding to the last 6 years of growth (2010–2016). Based on these data, we assessed the impact of the ambient seawater properties (SST, salinity, carbonate chemistry) on the cf composition of these slow-growing reef-building genera at the Pacifc basin scale.
Keyword(s):
Acid-base regulation; Animalia; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Calcification/Dissolution; Cnidaria; Coast and continental shelf; Diploastrea heliopora; Field observation; Growth/Morphology; North Pacific; Porites sp.; Single species; South Pacific; Temperate; Tropical
Related to:
Canesi, Marine; Douville, Eric; Montagna, Paolo; Taviani, Marco; Stolarski, J; Bordier, Louise; Dapoigny, Arnaud; Coulibaly, Gninwoyo Eric Hermann; Simon, Anne‑Catherine; Agelou, Mathieu; Fin, Jonathan; Metzl, Nicolas; Iwankow, Guillaume; Allemand, Denis; Planes, Serge; Moulin, Clémentine; Lombard, Fabien; Bourdin, Guillaume; Troublé, Romain; Agostini, Sylvain; Banaigs, Bernard; Boissin, Emilie; Boss, Emmanuel; Bowler, Chris; De Vargas, Colomban; Flores, M; Forcioli, Didier; Furla, Paola; Gilson, Eric; Galand, Pierre E; Pesant, Stephane; Sunagawa, Shinichi; Thomas, Olivier P; Vega Thurber, Rebecca; Voolstra, Christian R; Wincker, Patrick; Zoccola, Didier; Reynaud, Stéphanie (2023): Differences in carbonate chemistry up-regulation of long-lived reef-building corals. Scientific Reports, 13(1), 11589, https://doi.org/10.1038/s41598-023-37598-9
Douville, Eric; Bourdin, Guillaume; Lombard, Fabien; Gorsky, G; Fin, Jonathan; Metzl, Nicolas; Pesant, Stephane; Tara Pacific Consortium (2022): Seawater carbonate chemistry dataset collected during the Tara Pacific Expedition 2016-2018. PANGAEA, https://doi.org/10.1594/PANGAEA.944420
Related code / software:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
Project(s):
Coverage:
Median Latitude: -4.533336 * Median Longitude: 172.420074 * South-bound Latitude: -27.066700 * West-bound Longitude: 121.483300 * North-bound Latitude: 27.083300 * East-bound Longitude: -81.783300
Date/Time Start: 2016-07-23T00:00:00 * Date/Time End: 2018-08-25T00:00:00
Minimum DEPTH, water: 3 m * Maximum DEPTH, water: 20 m
Event(s):
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-04-08.
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Canesi, Marine | |||
| 2 | Date/Time of event | Date/Time | Canesi, Marine | |||
| 3 | Type of study | Study type | Canesi, Marine | |||
| 4 | Species | Species | Canesi, Marine | |||
| 5 | Identification | ID | Canesi, Marine | Fig 1 | ||
| 6 | Location | Location | Canesi, Marine | |||
| 7 | Sample ID | Sample ID | Canesi, Marine | |||
| 8 | LATITUDE | Latitude | Canesi, Marine | Geocode | ||
| 9 | LONGITUDE | Longitude | Canesi, Marine | Geocode | ||
| 10 | DEPTH, water | Depth water | m | Canesi, Marine | Geocode | |
| 11 | Temperature, water | Temp | °C | Canesi, Marine | ||
| 12 | Salinity | Sal | Canesi, Marine | |||
| 13 | Boron/Calcium ratio | B/Ca | µmol/mol | Canesi, Marine | ||
| 14 | δ11B | δ11B | ‰ SRM | Canesi, Marine | ||
| 15 | Calcifying fluid, pH | CF pH | Canesi, Marine | |||
| 16 | Calcifying fluid, carbonate ion | CF [CO3]2- | µmol/kg | Canesi, Marine | ||
| 17 | Calcifying fluid, dissolved inorganic carbon | CF DIC | µmol/kg | Canesi, Marine | ||
| 18 | Calcifying fluid, aragonite saturation state | CF Omega Arg | Canesi, Marine | |||
| 19 | Linear extension | Lin ext | cm/a | Canesi, Marine | measured along the same 3 transects of density change measurements | |
| 20 | Linear extension | Lin ext | cm/a | Canesi, Marine | measured on 3 different slices of coral core CT-scans | |
| 21 | Density | Density | g/cm3 | Canesi, Marine | ||
| 22 | Calcification rate | Calc rate | g/cm2/a | Canesi, Marine | ||
| 23 | Temperature, water | Temp | °C | Canesi, Marine | punctual seawater properties | |
| 24 | Salinity | Sal | Canesi, Marine | punctual seawater properties | ||
| 25 | pH | pH | Canesi, Marine | Calculated using CO2SYS | total scale, punctual seawater properties | |
| 26 | Carbonate ion | [CO3]2- | µmol/kg | Canesi, Marine | Calculated using CO2SYS | punctual seawater properties |
| 27 | Carbon, inorganic, dissolved | DIC | µmol/kg | Canesi, Marine | Calculated using CO2SYS | punctual seawater properties |
| 28 | Aragonite saturation state | Omega Arg | Canesi, Marine | Calculated using CO2SYS | punctual seawater properties | |
| 29 | Temperature, water | Temp | °C | Canesi, Marine | integrated seawater properties | |
| 30 | Salinity | Sal | Canesi, Marine | integrated seawater properties | ||
| 31 | pH | pH | Canesi, Marine | total scale, integrated seawater properties | ||
| 32 | Carbonate ion | [CO3]2- | µmol/kg | Canesi, Marine | integrated seawater properties | |
| 33 | Carbon, inorganic, dissolved | DIC | µmol/kg | Canesi, Marine | integrated seawater properties | |
| 34 | Aragonite saturation state | Omega Arg | Canesi, Marine | integrated seawater properties | ||
| 35 | Alkalinity, total | AT | µmol/kg | Canesi, Marine | Potentiometric titration | |
| 36 | Carbon, inorganic, dissolved | DIC | µmol/kg | Canesi, Marine | Potentiometric titration | |
| 37 | Carbonate system computation flag | CSC flag | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | ||
| 38 | pH | pH | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | total scale, punctual seawater properties | |
| 39 | Carbon dioxide | CO2 | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | punctual seawater properties |
| 40 | Fugacity of carbon dioxide (water) at sea surface temperature (wet air) | fCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | punctual seawater properties |
| 41 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | punctual seawater properties |
| 42 | Bicarbonate ion | [HCO3]- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | punctual seawater properties |
| 43 | Carbonate ion | [CO3]2- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | punctual seawater properties |
| 44 | Aragonite saturation state | Omega Arg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | punctual seawater properties | |
| 45 | Calcite saturation state | Omega Cal | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | punctual seawater properties |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1532 data points