Citation:

PANGAEA.965583 (dataset in review)

Name: Foraminifera (living) count data containing infomation about the samples volume and split number, used to calculate 'foraminiferal density' from sediment surface samples at stations REF, IF20-12, IF20-10, IF20-18, IF20-01 and IF20-04
License: https://creativecommons.org/licenses/by/4.0/
Keywords: eDNA metabarcoding; Foraminiferal assemblages; heavy metals; Pollutants

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Abstract:

To obtain the foraminifera count data sediment (stained with Rose Bengal, a solution which causes living tissue to appear pink) was washed through a 63 µm sieve and then picked using a standard stereo-microscope. Only living individuals (indicated by pink stain) were included in the data set.

Keyword(s):

eDNA metabarcoding; Foraminiferal assemblages; heavy metals; Pollutants

Coverage:

Median Latitude: 59.093118 * Median Longitude: 11.312461 * South-bound Latitude: 59.051000 * West-bound Longitude: 11.212167 * North-bound Latitude: 59.113666 * East-bound Longitude: 11.406167

Date/Time Start: 2020-11-10T00:00:00 * Date/Time End: 2020-11-11T00:00:00

Minimum DEPTH, sediment/rock: 0 m * Maximum DEPTH, sediment/rock: 0 m

Event(s):

IF20-01B * Latitude: 59.090000 * Longitude: 11.376667 * Date/Time: 2020-11-10T00:00:00 * Elevation: -38.0 m * Location: Idefjorden, Sweden * Method/Device: Gemini Corer * Comment: Foraminifera count; metagenome, marine sediment (replicate 1)

IF20-01E * Latitude: 59.090000 * Longitude: 11.376667 * Date/Time: 2020-11-10T00:00:00 * Elevation: -38.0 m * Location: Idefjorden, Sweden * Method/Device: Gemini Corer * Comment: Foraminifera count; metagenome, marine sediment (replicate 2)

IF20-01F * Latitude: 59.090000 * Longitude: 11.376667 * Date/Time: 2020-11-10T00:00:00 * Elevation: -38.0 m * Location: Idefjorden, Sweden * Method/Device: Gemini Corer * Comment: Foraminifera count; metagenome, marine sediment (replicate 3)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Event label	Event		O'Brien, Phoebe Alexandra Joy
2	Date/Time of event	Date/Time		O'Brien, Phoebe Alexandra Joy
3	Latitude of event	Latitude		O'Brien, Phoebe Alexandra Joy
4	Longitude of event	Longitude		O'Brien, Phoebe Alexandra Joy
5	Elevation of event	Elevation	m	O'Brien, Phoebe Alexandra Joy
6	DEPTH, sediment/rock	Depth sed	m	O'Brien, Phoebe Alexandra Joy		Geocode
7	Adercotryma glomeratum	A. glomeratum	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
8	Ammobaculites sp.	Ammobaculites sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
9	Ammodiscus sp.	Ammodiscus sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
10	Ammoscalaria pseudospiralis	A. pseudospiralis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
11	Ammoscalaria runiana	A. runiana	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
12	Cribrostomoides jeffreysii	C. jeffreysii	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
13	Cribrostomoides kosterensis	C. kosterensis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
14	Cribrostomoides sp.	Cribrostomoides sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
15	Eggerelloides advena	E. advena	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
16	Eggerelloides medius	E. medius	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
17	Eggerelloides scaber	E. scaber	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
18	Eggerelloides sp.	Eggerelloides sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
19	Glomospira sp.	Glomospira sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
20	Haplophragmoides bradyi	H. bradyi	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
21	Haplophragmoides pusillum	H. pusillum	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
22	Leptohalysis catella	L. catella	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
23	Liebusella goesi	L. goesi	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
24	Miliammina fusca	M. fusca	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
25	Miliammina sp.	Miliammina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
26	Proteonina decorata	P. decorata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
27	Psammosphaera bowmanni	P. bowmanni	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
28	Psammosphaera fusca	P. fusca	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
29	Recurvoides trochamminiformis	R. trochamminiformis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
30	Recurvoides sp.	Recurvoides sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
31	Reophax dentaliniformis	R. dentaliniformis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
32	Reophax fusiformis	R. fusiformis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
33	Reophax guttifera	R. guttifera	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
34	Reophax scorpiurus	R. scorpiurus	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
35	Reophax subfusiformis	R. subfusiformis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
36	Reophax sp.	Reophax sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
37	Spiroplectammina biformis	S. biformis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
38	Spiroplectammina sp.	Spiroplectammina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	"Spiroplectammina cochleata"
39	Textularia earlandi	T. earlandi	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
40	Textularia gramen	T. gramen	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	T. gramen/bocki
41	Textularia sagittula	T. sagittula	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
42	Textularia skagerakensis	T. skagerakensis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
43	Thurammina sphaerica	T. sphaerica	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
44	Trochammina labiosa	T. labiosa	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
45	Trochammina rotaliformis	T. rotaliformis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
46	Trochammina sp.	Trochammina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
47	Verneuilinulla advena	V. advena	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
48	Foraminifera, benthic agglutinated indeterminata	Foram benth agg ind	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
49	Fragments	Fragm	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	agglutinated fragments
50	Alabaminella weddellensis	A. weddellensis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
51	Ammonia falsobeccarii	A. falsobeccarii	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
52	Ammonia sp.	Ammonia sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
53	Astrononion gallowayi	A. gallowayi	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
54	Bolivina robusta	B. robusta	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
55	Bolivina pseudoplicata	B. pseudoplicata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
56	Bolivinellina pseudopunctata	B. pseudopunctata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
57	Brizalina skagerrakensis	B. skagerrakensis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
58	Bulimina elongata	B. elongata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
59	Bulimina marginata	B. marginata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
60	Cassidulina laevigata	C. laevigata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
61	Cassidulina neoteretis	C. neoteretis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
62	Cassidulina reniforme	C. reniforme	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
63	Cibicidoides lobatulus	C. lobatulus	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
64	Elphidium albiumbilicatum	E. albiumbilicatum	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
65	Elphidium excavatum	E. excavatum	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
66	Elphidium sp.	Elphidium sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
67	Epistominella sp.	Epistominella sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
68	Epistominella vitrea	E. vitrea	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
69	Fissurina marginata	F. marginata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
70	Fissurina sp.	Fissurina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
71	Glandulina sp.	Glandulina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
72	Globulina sp.	Globulina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
73	Hippocrepinella sp.	Hippocrepinella sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	"Hippocrepinella fusilla"
74	Hormosinella gracilis	H. gracilis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
75	Hyalinea balthica	H. balthica	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
76	Lagena laevis	L. laevis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
77	Lagena sp.	Lagena sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
78	Lagena striata	L. striata	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
79	Laryngosigma lactea	L. lactea	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
80	Melonis barleeanus	M. barleeanus	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
81	Miliolinella enoplostoma	M. enoplostoma	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
82	Miliolinella subrotunda	M. subrotunda	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
83	Milioloidea	Milioloidea	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	gen. sp.
84	Nonionella iridea	N. iridea	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
85	Nonionellina labradorica	N. labradorica	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
86	Nonionella sp.	Nonionella sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
87	Nonionella sp.	Nonionella sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	sp. T1
88	Nonionella turgida	N. turgida	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
89	Pyrgo williamsoni	P. williamsoni	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
90	Quinqueloculina nitida	Q. nitida	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
91	Quinqueloculina oblonga	Q. oblonga	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
92	Quinqueloculina seminulum	Q. seminulum	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
93	Quinqueloculina sp.	Quinqueloculina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
94	Stainforthia fusiformis	S. fusiformis	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
95	Triloculina sp.	Triloculina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
96	Uvigerina sp.	Uvigerina sp.	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	U. celtica?
97	Foraminifera, benthic calcareous indeterminata	Foram benth calc indet	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
98	Fragments	Fragm	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction	Calcareous fragments
99	Foraminifera, benthic, total	Foram benth tot	#	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
100	Sample volume	Samp vol	cm³	O'Brien, Phoebe Alexandra Joy
101	Foraminifera, living	Foram l	#/10 cm³	O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
102	Number of cells	No cells	#	O'Brien, Phoebe Alexandra Joy		No. of counting cells counted out of 45
103	Split	Split		O'Brien, Phoebe Alexandra Joy	Counting <63 µm fraction
104	Method comment	Method comm		O'Brien, Phoebe Alexandra Joy		Counting approach

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

1666 data points

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