Varma, Devika; Hopmans, Ellen C; van Kemenda, Zoe R; Kusch, Stephanie; Berg, Sonja; Bale, Nicole Jane; Sangiorgi, Francesca; Reichart, Gert-Jan; Sinninghe Damsté, Jaap S; Schouten, Stefan (2024): OHGDGT global surface sediment data [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.964885
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Published: 2024-01-19 • DOI registered: 2024-02-17
Abstract:
Here, we compile an extensive global surface sediment dataset of OH-isoGDGTs as well as regular isoprenoid GDGTs (isoGDGTs), with both data generated at NIOZ and previously published data from other laboratories. We explore recently developed temperature proxies based on hydroxylated isoprenoid Glycerol Dialkyl Glycerol Tetraethers (OH-isoGDGTs), such as %OH, RI-OH, RI-OH' and OHC for their potential for reconstructing past temperature changes. The data contains surface sediment data from the global ocean used in the study 'Evaluating isoprenoidal hydroxylated GDGT-based temperature proxies in surface sediments from the global ocean'. The excel sheet contains information regarding the surface sediments, their location, enivironmental parameters from each location extracted from WOA database, peak area of iso-GDGTs and OH-isoGDGTs, proxy indices discussed in the study and references for previously published data.
Keyword(s):
Supplement to:
Varma, Devika; Hopmans, Ellen C; van Kemenda, Zoe R; Kusch, Stephanie; Berg, Sonja; Bale, Nicole Jane; Sangiorgi, Francesca; Reichart, Gert-Jan; Sinninghe Damsté, Jaap S; Schouten, Stefan (2023): Evaluating isoprenoidal hydroxylated GDGT-based temperature proxies in surface sediments from the global ocean. Geochimica et Cosmochimica Acta, S0016703723006403, https://doi.org/10.1016/j.gca.2023.12.019
Source:
Bale, Nicole Jane; Villanueva, Laura; Hopmans, Ellen C; Schouten, Stefan; Sinninghe Damsté, Jaap S (2013): Different seasonality of pelagic and benthic Thaumarchaeota in the North Sea. Biogeosciences, 10(11), 7195-7206, https://doi.org/10.5194/bg-10-7195-2013
Fallet, Ulrike; Castañeda, Isla S; Henry-Edwards, Aneurin G; Richter, Thomas; Boer, Wim; Schouten, Stefan; Brummer, Geert-Jan A (2012): Sedimentation and burial of organic and inorganic temperature proxies in the Mozambique Channel, SW Indian Ocean. Deep Sea Research Part I: Oceanographic Research Papers, 59, 37-53, https://doi.org/10.1016/j.dsr.2011.10.002
Fietz, Susanne; Ho, Sze Ling; Huguet, Carme; Rosell-Melé, Antoni; Martínez-García, Alfredo (2016): Appraising GDGT-based seawater temperature indices in the Southern Ocean. Organic Geochemistry, 102, 93-105, https://doi.org/10.1016/j.orggeochem.2016.10.003
Fietz, Susanne; Huguet, Carme; Rueda, Gemma; Hambach, Bastian; Rosell-Melé, Antoni (2013): Hydroxylated isoprenoidal GDGTs in the Nordic Seas. Marine Chemistry, 152, 1-10, https://doi.org/10.1016/j.marchem.2013.02.007
Ho, Sze Ling; Mollenhauer, Gesine; Fietz, Susanne; Martínez‐García, Alfredo; Lamy, Frank; Rueda, Gemma; Schipper, Konstanze; Méheust, Marie; Rosell-Melé, Antoni; Stein, Ruediger; Tiedemann, Ralf (2014): Appraisal of TEX86 and TEX(L)86 thermometries in subpolar and polar regions. Geochimica et Cosmochimica Acta, 131, 213-226, https://doi.org/10.1016/j.gca.2014.01.001
Huguet, Carme; Fietz, Susanne; Rosell-Melé, Antoni (2013): Global distribution patterns of hydroxy glycerol dialkyl glycerol tetraethers. Organic Geochemistry, 57, 107-118, https://doi.org/10.1016/j.orggeochem.2013.01.010
Kaiser, Jérôme; Arz, Helge Wolfgang (2016): Sources of sedimentary biomarkers and proxies with potential paleoenvironmental significance for the Baltic Sea. Continental Shelf Research, 122, 102-119, https://doi.org/10.1016/j.csr.2016.03.020
Kim, Jung-Hyun; van der Meer, Jaap; Schouten, Stefan; Helmke, Peer; Willmott, Verónica; Sangiorgi, Francesca; Koç, Nalân; Hopmans, Ellen C; Sinninghe Damsté, Jaap S (2010): New indices and calibrations derived from the distribution of crenarchaeal isoprenoid tetraether lipids: Implications for past sea surface temperature reconstructions. Geochimica et Cosmochimica Acta, 74(16), 4639-4654, https://doi.org/10.1016/j.gca.2010.05.027
Kim, Jung-Hyun; Villanueva, Laura; Zell, Claudia; Sinninghe Damsté, Jaap S (2016): Biological source and provenance of deep-water derived isoprenoid tetraether lipids along the Portuguese continental margin. Geochimica et Cosmochimica Acta, 172, 177-204, https://doi.org/10.1016/j.gca.2015.09.010
Lamping, Nele; Müller, Juliane; Hefter, Jens; Mollenhauer, Gesine; Haas, Christian; Shi, Xiaoxu; Vorrath, Maria-Elena; Lohmann, Gerrit; Hillenbrand, Claus-Dieter (2021): Evaluation of lipid biomarkers as proxies for sea ice and ocean temperatures along the Antarctic continental margin. Climate of the Past, 17(5), 2305-2326, https://doi.org/10.5194/cp-17-2305-2021
Lo, Li; Belt, Simon T; Lattaud, Julie; Friedrich, Tobias; Zeeden, Christian; Schouten, Stefan; Smik, Lukas; Timmermann, Axel; Cabedo-Sanz, Patricia; Huang, Jyh-Jaan; Zhou, Liping; Ou, Tsong-Hua; Chang, Yuan-Pin; Wang, Liang-Chi; Chou, Yu-Min; Shen, Chuan-Chou; Chen, Min-Te; Wei, Kuo-Yen; Song, Sheng-Rong; Fang, Tien-Hsi; Gorbarenko, Sergey A; Wang, Wei-Lung; Lee, Teh-Quei; Elderfield, Henry; Hodell, David A (2018): Precession and atmospheric CO 2 modulated variability of sea ice in the central Okhotsk Sea since 130,000 years ago. Earth and Planetary Science Letters, 488, 36-45, https://doi.org/10.1016/j.epsl.2018.02.005
Lü, Xiaoxia; Liu, Xiao-Lei; Elling, Felix J; Yang, Huan; Xie, Shucheng; Song, Jinming; Li, Xuegang; Yuan, Huamao; Li, Ning; Hinrichs, Kai-Uwe (2015): Hydroxylated isoprenoid GDGTs in Chinese coastal seas and their potential as a paleotemperature proxy for mid-to-low latitude marginal seas. Organic Geochemistry, 89-90, 31-43, https://doi.org/10.1016/j.orggeochem.2015.10.004
Sinninghe Damsté, Jaap S (2016): Spatial heterogeneity of sources of branched tetraethers in shelf systems: The geochemistry of tetraethers in the Berau River delta (Kalimantan, Indonesia). Geochimica et Cosmochimica Acta, 186, 13-31, https://doi.org/10.1016/j.gca.2016.04.033
Sinninghe Damsté, Jaap S; Warden, Lisa; Berg, Carlo; Jürgens, Klaus; Moros, Matthias (2022): Evaluation of the distributions of hydroxylated glycerol dibiphytanyl glycerol tetraethers (GDGTs) in Holocene Baltic Sea sediments for reconstruction of sea surface temperature: the effect of changing salinity. Climate of the Past, 18(10), 2271-2288, https://doi.org/10.5194/cp-18-2271-2022
Smith, Marita; De Deckker, Patrick; Rogers, John; Brocks, Jochen J; Hope, Janet; Schmidt, Sabine; Lopes dos Santos, Raquel A; Schouten, Stefan (2013): Comparison of , and LDI temperature proxies for reconstruction of south-east Australian ocean temperatures. Organic Geochemistry, 64, 94-104, https://doi.org/10.1016/j.orggeochem.2013.08.015
Wei, Bingbing; Jia, Guodong; Hefter, Jens; Kang, Manyu; Park, Eunmi; Wang, Shizhu; Mollenhauer, Gesine (2020): Comparison of the U₃₇ᴷ', LDI, TEX₈₆ᴴ, and RI-OH temperature proxies in sediments from the northern shelf of the South China Sea. Biogeosciences, 17(17), 4489-4508, https://doi.org/10.5194/bg-17-4489-2020
Yang, Yi; Gao, Chao; Dang, Xinyue; Ruan, Xiaoyan; Lü, Xiaoxia; Xie, Shucheng; Li, Xuejie; Yao, Yongjian; Yang, Huan (2018): Assessing hydroxylated isoprenoid GDGTs as a paleothermometer for the tropical South China Sea. Organic Geochemistry, 115, 156-165, https://doi.org/10.1016/j.orggeochem.2017.10.014
Zell, Claudia; Kim, Jung-Hyun; Hollander, David J; Lorenzoni, Laura; Baker, Paul A; Silva, Cleverson Guizan; Nittrouer, Charles A; Sinninghe Damsté, Jaap S (2014): Sources and distributions of branched and isoprenoid tetraether lipids on the Amazon shelf and fan: Implications for the use of GDGT-based proxies in marine sediments. Geochimica et Cosmochimica Acta, 139, 293-312, https://doi.org/10.1016/j.gca.2014.04.038
Project(s):
Funding:
European Commission (EC), grant/award no. 847504: Local training network: Netherlands Earth System Science Centre: “NESSC”
Coverage:
Median Latitude: 12.543211 * Median Longitude: 12.212041 * South-bound Latitude: -77.800000 * West-bound Longitude: -179.010000 * North-bound Latitude: 87.070000 * East-bound Longitude: 177.270000
Date/Time Start: 1989-10-19T00:55:00 * Date/Time End: 2019-04-01T11:10:00
Minimum Elevation: -5187.0 m * Maximum Elevation: -1.0 m
Event(s):
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Varma, Devika | |||
| 2 | Sample code/label | Sample label | Varma, Devika | |||
| 3 | Location | Location | Varma, Devika | |||
| 4 | LATITUDE | Latitude | Varma, Devika | Geocode | ||
| 5 | LONGITUDE | Longitude | Varma, Devika | Geocode | ||
| 6 | Depth, bathymetric | Bathy depth | m | Varma, Devika | At sampling position | |
| 7 | Sea surface temperature, annual mean | SST (1-12) | °C | Varma, Devika | extracted from the World Ocean Atlas 2018 (WOA18) | |
| 8 | Sea surface temperature, annual mean | SST (1-12) | °C | Varma, Devika | extracted from the World Ocean Atlas 2018 (WOA18) | 0-200 m |
| 9 | Acyclic glycerol dialkyl glycerol tetraether, fractional abundance | GDGT-0 | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1302 | |
| 10 | Monocyclic glycerol dialkyl glycerol tetraether, fractional abundance | GDGT-1 | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1300 | |
| 11 | Dicyclic glycerol dialkyl glycerol tetraether, fractional abundance | GDGT-2 | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1298 | |
| 12 | Tricyclic glycerol dialkyl glycerol tetraether, fractional abundance | GDGT-3 | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1296 | |
| 13 | Crenarchaeol, fractional abundance | Cren | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1292 | |
| 14 | Crenarchaeol regio-isomer, fractional abundance | Cren' | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1292 | |
| 15 | Hydroxylated acyclic glycerol dialkyl glycerol tetraether, fractional abundance | OH-GDGT-0 | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1300 | |
| 16 | Hydroxylated monocyclic glycerol dialkyl glycerol tetraether, fractional abundance | OH-GDGT-1 | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1298 | |
| 17 | Hydroxylated dicyclic glycerol dialkyl glycerol tetraether, fractional abundance | OH-GDGT-2 | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1296 | |
| 18 | Acyclic glycerol dialkyl glycerol tetraether (peak area) | GDGT-0 peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1302 | |
| 19 | Monocyclic glycerol dialkyl glycerol tetraether (peak area) | GDGT-1 peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1300 | |
| 20 | Dicyclic glycerol dialkyl glycerol tetraether (peak area) | GDGT-2 peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1298 | |
| 21 | Tricyclic glycerol dialkyl glycerol tetraether (peak area) | GDGT-3 peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1296 | |
| 22 | Crenarchaeol (peak area) | Cren peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1292 | |
| 23 | Crenarchaeol regio-isomer (peak area) | Cren' peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1292 | |
| 24 | Hydroxylated acyclic glycerol dialkyl glycerol tetraether (peak area) | OH-GDGT-0 peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1300 | |
| 25 | Hydroxylated monocyclic glycerol dialkyl glycerol tetraether (peak area) | OH-GDGT-1 peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1298 | |
| 26 | Hydroxylated dicyclic glycerol dialkyl glycerol tetraether (peak area) | OH-GDGT-2 peak area | Varma, Devika | Ultra high performance liquid chromatography mass spectrometer (UHPLC-MS) | m/z 1296 | |
| 27 | Branched and isoprenoid tetraether index | BIT | Varma, Devika | Calculated according to Hopmans et al. (2004); De Jonge et al. (2015) | Hopmans et al. (2004, doi:10.1016/j.epsl.2004.05.012) | |
| 28 | Tetraether index of 86 carbon atoms | TEX86 | Varma, Devika | Calculated according to Schouten et al. (2002) | ||
| 29 | Ring index of hydroxylated tetraethers RI-OH | RI-OH | Varma, Devika | Calculated according to Lü et al. (2015) | ||
| 30 | Ring index of hydroxylated tetraethers RI-OH' | RI-OH' | Varma, Devika | Calculated according to Lü et al. (2015) | ||
| 31 | Extended tetraether index of 86 carbon atoms with OH-isoGDGTs | OH-C | Varma, Devika | Calculated according to Fietz et al. (2016) | ||
| 32 | Hydroxide | OH | % | Varma, Devika | Calculated according to Huguet et al. (2013) | |
| 33 | Tetraether index of 86 carbon atoms including OH-isoGDGT-0 | TEX86-OH | Varma, Devika | |||
| 34 | Laboratory | Lab | Varma, Devika | |||
| 35 | Analytical method | Method | Varma, Devika | |||
| 36 | Method comment | Method comm | Varma, Devika | |||
| 37 | Reference/source | Reference | Varma, Devika | Reference paper | ||
| 38 | Uniform resource locator/link to reference | URL ref | Varma, Devika | Link for Reference paper | ||
| 39 | Reference/source | Reference | Varma, Devika | Reference paper for non-hydroxylated isoGDGTs | ||
| 40 | Uniform resource locator/link to reference | URL ref | Varma, Devika | Link for Reference paper for non-hydroxylated isoGDGTs |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
25936 data points
Download Data
View dataset as HTML (shows only first 2000 rows)
Datasets with similar metadata
- Wei, B; Jia, G; Hefter, J et al. (2019): Comparison of the U₃₇ᴷ', LDI, TEX₈₆ᴴ and RI-OH temperature proxies in sediments from the northern shelf of the South China Sea. https://doi.org/10.1594/PANGAEA.905187
- Varma, D; Hopmans, EC; van Kemenda, ZR et al. (2024): Temperature records based on TEX86, TEX86OH, %OH, RI-OH, RI-OH', OHC from sediment core Co1010. https://doi.org/10.1594/PANGAEA.964895
- Varma, D; van der Meer, MTJ; Reichart, G-J et al. (2024): The Mediterranean Sea and the Red Sea OHGDGT surface sediment data. https://doi.org/10.1594/PANGAEA.969380
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