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Martins, Catarina P P; Arnold, Angelina L; Kömpf, Katharina; Schubert, Patrick; Ziegler, Maren; Wilke, Thomas; Reichert, Jessica (2022): Seawater carbonate chemistry and physiological parameters of Acropora humilis, Acropora millepora, Pocillopora damicornis, Pocillopora verrucosa, Porites cylindrica, and Porites lutea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.946411

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Abstract:
Ocean acidification (OA) poses a major threat to calcifying organisms such as reef-building corals, typically leading to reduced calcification rates. Mechanisms to compensate the effects of OA on coral growth may, however, involve processes other than calcification. Yet, the physiological patterns mediating coral growth under OA are not fully understood, despite an extensive body of literature characterizing physiological changes in corals under OA. Therefore, we conducted a three-month laboratory experiment with six scleractinian coral species (Acropora humilis, Acropora millepora, Pocillopora damicornis, Pocillopora verrucosa, Porites cylindrica, and Porites lutea) to assess physiological parameters that potentially characterize growth (calcification, volume, and surface area), maintenance (tissue biomass, and lipid and protein content), and cellular stress (apoptotic activity) response under ambient (pH 7.9) and low pH (pH 7.7). We identified genus- and species-specific physiological parameters potentially mediating the observed growth responses to low pH. We found no significant changes in calcification but species showed decreasing growth in volume and surface area, which occurred alongside changes in maintenance and cellular stress parameters that differed between genera and species. Acropora spp. showed elevated cellular stress and Pocillopora spp. showed changes in maintenance-associated parameters, while both genera largely maintained growth under low pH. Conversely, Porites spp. experienced the largest decreases in volume growth but showed no major changes in parameters related to maintenance or cellular stress. Our findings indicate that growth- and calcification-related responses alone may not fully reflect coral susceptibility to OA. They may also contribute to a better understanding of the complex physiological processes leading to differential growth changes of reef-building corals in response to low pH conditions.
Keyword(s):
Acropora humilis; Acropora millepora; Animalia; Benthic animals; Benthos; Calcification/Dissolution; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Laboratory experiment; Other studied parameter or process; Pocillopora damicornis; Pocillopora verrucosa; Porites cylindrica; Porites lutea; Respiration; Single species; South Pacific; Tropical
Supplement to:
Martins, Catarina P P; Arnold, Angelina L; Kömpf, Katharina; Schubert, Patrick; Ziegler, Maren; Wilke, Thomas; Reichert, Jessica (2022): Growth Response of Reef-Building Corals to Ocean Acidification Is Mediated by Interplay of Taxon-Specific Physiological Parameters. Frontiers in Marine Science, 9, https://doi.org/10.3389/fmars.2022.872631
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Martins, Catarina P P (2022): Raw data for: Growth response of reef-building corals to ocean acidification is mediated by interplay of taxon-specific physiological parameters. figshare, https://doi.org/10.6084/m9.figshare.19107380
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-07-18.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeMartins, Catarina P PStudy
2Species, unique identificationSpecies UIDMartins, Catarina P P
3Species, unique identification (URI)Species UID (URI)Martins, Catarina P P
4Species, unique identification (Semantic URI)Species UID (Semantic URI)Martins, Catarina P P
5TreatmentTreatMartins, Catarina P P
6Calcification rate of calcium carbonate per monthCalc rate CaCO3/monthmg/cm2/monthMartins, Catarina P P
7Calcification rate, standard deviationCalc rate std dev±Martins, Catarina P P
8Growth rate, volume per surface areaµmm3/mm2/monthMartins, Catarina P P
9Growth rate, standard deviationµ std dev±Martins, Catarina P P
10Growth rateµ%/monthMartins, Catarina P PSurface Area
11Growth rate, standard deviationµ std dev±Martins, Catarina P PSurface Area
12Tissue biomassTis biommg/gMartins, Catarina P P
13Tissue biomass, standard deviationTis biom std dev±Martins, Catarina P P
14Proteins, per ash free dry massProt/afdmmg/gMartins, Catarina P P
15Proteins, standard deviationProtein std dev±Martins, Catarina P P
16Lipids, per ash free dry massLipid/afdmmg/gMartins, Catarina P P
17Lipids, standard deviationLipids std dev±Martins, Catarina P P
18Apoptotic activity, per proteinApoptotic act/protRLU/µgMartins, Catarina P P
19Apoptotic activity, per protein, standard deviationApoptotic act/prot std dev±Martins, Catarina P P
20Temperature, waterTemp°CMartins, Catarina P P
21Temperature, water, standard deviationTemp std dev±Martins, Catarina P P
22ReplicatesRepl#Martins, Catarina P P
23SalinitySalMartins, Catarina P P
24Salinity, standard deviationSal std dev±Martins, Catarina P P
25ReplicatesRepl#Martins, Catarina P P
26pHpHMartins, Catarina P Ptotal scale
27pH, standard deviationpH std dev±Martins, Catarina P Ptotal scale
28ReplicatesRepl#Martins, Catarina P Ptotal scale
29Alkalinity, totalATµmol/kgMartins, Catarina P P
30Alkalinity, total, standard deviationAT std dev±Martins, Catarina P P
31ReplicatesRepl#Martins, Catarina P P
32Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmMartins, Catarina P PCalculated using CO2SYS
33Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Martins, Catarina P PCalculated using CO2SYS
34ReplicatesRepl#Martins, Catarina P P
35Aragonite saturation stateOmega ArgMartins, Catarina P PCalculated using CO2SYS
36Aragonite saturation state, standard deviationOmega Arg std dev±Martins, Catarina P PCalculated using CO2SYS
37ReplicatesRepl#Martins, Catarina P P
38pHpHMartins, Catarina P PDaily Minimum, total scale
39pH, standard deviationpH std dev±Martins, Catarina P PDaily Minimum, total scale
40ReplicatesRepl#Martins, Catarina P PDaily Minimum, total scale
41pHpHMartins, Catarina P PDaily Maximum, total scale
42pH, standard deviationpH std dev±Martins, Catarina P PDaily Maximum, total scale
43ReplicatesRepl#Martins, Catarina P PDaily Maximum, total scale
44Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
600 data points

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