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Xie, Emei; Xu, Kai; Li, Zhengke; Li, Wei; Yi, Xiangqi; Li, Hongzhou; Han, Yonghe; Zhang, Hong; Zhang, Yong (2021): Seawater carbonate chemistry and elemental contents and macromolecules of the coccolithophore Emiliania huxleyi [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.943450

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Abstract:
Elemental contents change with shifts in macromolecular composition of marine phytoplankton. Recent studies focus on the responses of elemental contents of coccolithophores, a major calcifying phytoplankton group, to changing carbonate chemistry, caused by the dissolution of anthropogenically derived CO2 into the surface ocean. However, the effects of changing carbonate chemistry on biomacromolecules, such as protein and carbohydrate of coccolithophores, are less documented. Here, we disentangled the effects of elevated dissolved inorganic carbon (DIC) concentration (900 to 4,930μmol/kg) and reduced pH value (8.04 to 7.70) on physiological rates, elemental contents, and macromolecules of the coccolithophore Emiliania huxleyi. Compared to present DIC concentration and pH value, combinations of high DIC concentration and low pH value (ocean acidification) significantly increased pigments content, particulate organic carbon (POC), and carbohydrate content and had less impact on growth rate, maximal relative electron transport rate (rETRmax), particulate organic nitrogen (PON), and protein content. In high pH treatments, elevated DIC concentration significantly increased growth rate, pigments content, rETRmax, POC, particulate inorganic carbon (PIC), protein, and carbohydrate contents. In low pH treatments, the extents of the increase in growth rate, pigments and carbohydrate content were reduced. Compared to high pH value, under low DIC concentration, low pH value significantly increased POC and PON contents and showed less impact on protein and carbohydrate contents; however, under high DIC concentration, low pH value significantly reduced POC, PON, protein, and carbohydrate contents. These results showed that reduced pH counteracted the positive effects of elevated DIC concentration on growth rate, rETRmax, POC, PON, carbohydrate, and protein contents. Elevated DIC concentration and reduced pH acted synergistically to increase the contribution of carbohydrate–carbon to POC, and antagonistically to affect the contribution of protein–nitrogen to PON, which further shifted the carbon/nitrogen ratio of E. huxleyi.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Emiliania huxleyi; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Not applicable; Other; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species
Supplement to:
Xie, Emei; Xu, Kai; Li, Zhengke; Li, Wei; Yi, Xiangqi; Li, Hongzhou; Han, Yonghe; Zhang, Hong; Zhang, Yong (2021): Disentangling the Effects of Ocean Carbonation and Acidification on Elemental Contents and Macromolecules of the Coccolithophore Emiliania huxleyi. Frontiers in Microbiology, 12, https://doi.org/10.3389/fmicb.2021.737454
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-04-22.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeZhang, Yongstudy
2SpeciesSpeciesZhang, Yong
3Registration number of speciesReg spec noZhang, YongWoRMS Aphia ID
4Uniform resource locator/link to referenceURL refZhang, Yong
5Experiment durationExp durationdaysZhang, Yong
6TreatmentTreatZhang, Yong
7Growth rateµ1/dayZhang, Yong
8Growth rate, standard deviationµ std dev±Zhang, Yong
9Chlorophyll a per cellChl a/cellpg/#Zhang, Yong
10Chlorophyll a, standard deviationChl a std dev±Zhang, Yong
11Carotenoids per cellCarotenoids/cellpg/#Zhang, Yong
12Carotenoids, standard deviationCarotenoids std dev±Zhang, Yong
13Carotenoids/Chlorophyll a ratioCarotenoids/Chl aZhang, Yong
14Carotenoids/Chlorophyll a ratio, standard deviationCarotenoids/Chl a std dev±Zhang, Yong
15Maximal electron transport rate, relativerETR maxZhang, Yong
16Maximal electron transport rate, relative, standard deviationrETR max std dev±Zhang, Yong
17Light use efficiencyalphaZhang, Yong
18Light use efficiency, standard deviationalpha std dev±Zhang, Yong
19Light saturation pointIkµmol/m2/sZhang, Yong
20Light saturation point, standard deviationIk std dev±Zhang, Yong
21Carbon, inorganic, particulate, per cellPIC/cellpg/#Zhang, Yong
22Carbon, inorganic, particulate, standard deviationPIC std dev±Zhang, Yong
23Carbon, organic, particulate, per cellPOC/cellpg/#Zhang, Yong
24Carbon, organic, particulate, standard deviationPOC std dev±Zhang, Yong
25Nitrogen, organic, particulate, per cellPON/cellpg/#Zhang, Yong
26Nitrogen, organic, particulate, standard deviationPON std dev±Zhang, Yong
27Particulate inorganic carbon/particulate organic carbon ratioPIC/POCZhang, Yong
28Particulate inorganic carbon/particulate organic carbon ratio, standard deviationPIC/POC ratio std dev±Zhang, Yong
29Carbon, organic, particulate/Nitrogen, organic, particulate ratioPOC/PONZhang, Yong
30Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviationPOC/PON std dev±Zhang, Yong
31Protein per cellProtein/cellpg/#Zhang, Yong
32Proteins, standard deviationProtein std dev±Zhang, Yong
33Carbohydrates, per cellCHO/cellpg/#Zhang, Yong
34Carbohydrates, total, standard deviationCHO tot std dev±Zhang, Yong
35Carbon, organic, particulatePOC%Zhang, YongAllocated to protein
36Carbon, organic, particulate, standard deviationPOC std dev±Zhang, YongAllocated to protein
37Carbon, organic, particulatePOC%Zhang, YongAllocated to carbohydrate
38Carbon, organic, particulate, standard deviationPOC std dev±Zhang, YongAllocated to carbohydrate
39Carbon, organic, particulatePOC%Zhang, YongAllocated to Chl a
40Carbon, organic, particulate, standard deviationPOC std dev±Zhang, YongAllocated to Chl a
41Carbon, organic, particulatePOC%Zhang, YongAllocated to carotenoid
42Carbon, organic, particulate, standard deviationPOC std dev±Zhang, YongAllocated to carotenoid
43Nitrogen, organic, particulatePON%Zhang, YongAllocated to protein
44Nitrogen, organic, particulate, standard deviationPON std dev±Zhang, YongAllocated to protein
45Nitrogen, organic, particulatePON%Zhang, YongAllocated to Chl a
46Nitrogen, organic, particulate, standard deviationPON std dev±Zhang, YongAllocated to Chl a
47SalinitySalZhang, Yong
48Temperature, waterTemp°CZhang, Yong
49Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmZhang, YongCalculated using CO2SYS
50Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Zhang, YongCalculated using CO2SYS
51pHpHZhang, YongPotentiometrictotal scale
52pH, standard deviationpH std dev±Zhang, YongPotentiometrictotal scale
53Alkalinity, totalATµmol/kgZhang, YongPotentiometric titration
54Alkalinity, total, standard deviationAT std dev±Zhang, YongPotentiometric titration
55Carbon, inorganic, dissolvedDICµmol/kgZhang, YongCalculated using CO2SYS
56Carbon, inorganic, dissolved, standard deviationDIC std dev±Zhang, YongCalculated using CO2SYS
57Bicarbonate ion[HCO3]-µmol/kgZhang, YongCalculated using CO2SYS
58Bicarbonate ion, standard deviation[HCO3]- std dev±Zhang, YongCalculated using CO2SYS
59Carbonate ion[CO3]2-µmol/kgZhang, YongCalculated using CO2SYS
60Carbonate ion, standard deviation[CO3]2- std dev±Zhang, YongCalculated using CO2SYS
61Carbon dioxideCO2µmol/kgZhang, YongCalculated using CO2SYS
62Carbon dioxide, standard deviationCO2 std dev±Zhang, YongCalculated using CO2SYS
63Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
64Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
65Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
66Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
67Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
68Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
69Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
70Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
71Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
284 data points

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