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Ayache, Nour; Lundholm, Nina; Gai, Frederik; Hervé, F; Amzil, Zouher; Caruana, Amandine (2021): Seawater carbonate chemistry and growth and survival of juveniles of the striped venus clam Chamelea gallina [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.937532

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Abstract:
This paper present the effects of ocean acidification on growth and domoic acid (DA) content of several strains of the toxic Pseudo-nitzschia australis and the non-toxic P. fraudulenta. Three strains of each species (plus two subclones of P. australis) were acclimated and grown in semi-continuous cultures at three pH levels: 8.07, 7.77, and 7.40, in order to simulate changes of seawater pH from present to plausible future levels. Our results showed that lowering pH from current level (8.07) to predicted pH level in 2100 (7.77) did not affect the mean growth rates of some of the P. australis strains (FR-PAU-17 and L3-100), but affected other strains either negatively (L3-30) or positively (L3.4). However, the growth rates significantly decreased with pH lowered to 7.40 (by 13% for L3-100, 43% for L3-30 and 16% for IFR-PAU-17 compared to the rates at pH 8.07). In contrast, growth rates of the non-toxic P. fraudulenta strains were not affected by pH changing from 8.07 to 7.40.
The P. australis strains produced DA at all pH levels tested, and the highest particulate DA concentration normalized to cell abundance (pDA) was found at pH 8.07. Total DA content (pDA and dissolved DA) was significantly higher at current pH (8.07) compared to pH (7.77), exept for one strain (L 3.4) where no difference was found. At lower pH levels 7.77 – 7.40, total DA content was similar, except for strains IFR-PAU-17 and L3-100 which had the lowest content at the pH 7.77. The diversity in the responses in growth and DA content highlights the inter- and intra-specific variation in Pseudo-nitzschia species in response to ocean acidification. When exploring environmental responses of Pseudo-nitzschia using cultured cells, not only strain-specific variation but also culturing history should be taken into consideration, as the light levels under which the subclones were cultured, afterwards affected both maximum growth rates and DA content.
Keyword(s):
Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Laboratory experiment; Laboratory strains; Not applicable; Ochrophyta; Other studied parameter or process; Pelagos; Phytoplankton; Pseudo-nitzschia australis; Pseudo-nitzschia fraudulenta; Single species
Supplement to:
Ayache, Nour; Lundholm, Nina; Gai, Frederik; Hervé, F; Amzil, Zouher; Caruana, Amandine (2021): Impacts of ocean acidification on growth and toxin content of the marine diatoms Pseudo-nitzschia australis and P. fraudulenta. Marine Environmental Research, 169, 105380, https://doi.org/10.1016/j.marenvres.2021.105380
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-10-22.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeAyache, Nourstudy
2SpeciesSpeciesAyache, Nour
3Registration number of speciesReg spec noAyache, Nour
4Uniform resource locator/link to referenceURL refAyache, NourWoRMS Aphia ID
5Experiment durationExp durationdaysAyache, Nour
6StrainStrainAyache, Nour
7TreatmentTreatAyache, Nour
8Growth rateµ1/dayAyache, NourMaximum specific
9Growth rate, standard deviationµ std dev±Ayache, NourMaximum specific
10Nitrate[NO3]-µmol/lAyache, Nour
11Nitrate, standard deviationNO3 std dev±Ayache, Nour
12Phosphate[PO4]3-µmol/lAyache, Nour
13Phosphate, standard deviation[PO4]3- std dev±Ayache, Nour
14SilicateSi(OH)4µmol/lAyache, Nour
15Silicate, standard deviationSi(OH)4 std dev±Ayache, Nour
16Nitrate[NO3]-µmol/lAyache, Nourmeasured at the beginning
17Nitrate, standard deviationNO3 std dev±Ayache, Nourmeasured at the beginning
18Phosphate[PO4]3-µmol/lAyache, Nourmeasured at the beginning
19Phosphate, standard deviation[PO4]3- std dev±Ayache, Nourmeasured at the beginning
20SilicateSi(OH)4µmol/lAyache, Nourmeasured at the beginning
21Silicate, standard deviationSi(OH)4 std dev±Ayache, Nourmeasured at the beginning
22Domoic acid per cellDA/cellpg/#Ayache, NourParticulate
23Domoic acid per cell, standard deviationDA/cell std dev±Ayache, NourParticulate
24Domoic acid per cellDA/cellpg/#Ayache, NourDissolved
25Domoic acid per cell, standard deviationDA/cell std dev±Ayache, NourDissolved
26Domoic acid per cellDA/cellpg/#Ayache, NourTotal
27Domoic acid per cell, standard deviationDA/cell std dev±Ayache, NourTotal
28pHpHAyache, NourSeawater scale
29Temperature, waterTemp°CAyache, Nour
30SalinitySalAyache, Nour
31Carbon, inorganic, dissolvedDICµmol/lAyache, Nour
32Carbon, inorganic, dissolved, standard deviationDIC std dev±Ayache, Nour
33Bicarbonate[HCO3]-µmol/lAyache, NourCalculated using CO2SYS
34Bicarbonate ion, standard deviation[HCO3]- std dev±Ayache, NourCalculated using CO2SYS
35Carbonate ion[CO3]2-µmol/lAyache, NourCalculated using CO2SYS
36Carbonate ion, standard deviation[CO3]2- std dev±Ayache, NourCalculated using CO2SYS
37Carbon dioxideCO2µmol/lAyache, NourCalculated using CO2SYS
38Carbon dioxide, standard deviationCO2 std dev±Ayache, NourCalculated using CO2SYS
39Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmAyache, NourCalculated using CO2SYS
40Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Ayache, NourCalculated using CO2SYS
41Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
43Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
915 data points

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