Tipple, Brett James; Christensen, Stephanie; Ianiri, Hope L; McCarthy, Matthew D; Prouty, Nancy G; Stewart, A Robin; Vokhshoori, Natasha L: δ13C analyses of amino acids from co-occurring clams in the San Francisco Bay-Sacramento/San Joaquin Delta [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.934840 (dataset in review), In: Tipple, BJ et al. (2023): Seasonal variations in the compound specific isotope analyses of amino acids from co-occurring clams in the San Francisco Bay-Sacramento/San Joaquin Delta [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.934952
Abstract:
Carbon isotope values of individual amino acids were measured. Clam specimens were collected at USGS Sites 2.1 and processed following Stewart et al. (2013; doi:10.3354/meps10503). Amino acids were hydrolyzed from clam muscle tissue, derivatized, and isolated following Vokhshoori et al. (2013; doi:10.3354/meps10746). The measurement of the carbon isotope values of individual amino acids were conducted following Vokhshoori et al., 2013 and Vokhshoori and McCarthy, 2013 (doi:10.1371/journal.pone.0098087), respectively.
Keyword(s):
Related to:
Tipple, Brett James; Stewart, A Robin; Prouty, Nancy G; Ianiri, Hope L; McCarthy, Matthew D (in prep.): Seasonal variations in the compound specific isotope analyses of amino acids from co-occurring clams in the San Francisco Bay-Sacramento/San Joaquin Delta.
Funding:
California Department of Fish and Wildlife, grant/award no. Q1996033: Developing a new molecular isotopic tool to examine Delta food webs
Coverage:
Latitude: 38.071000 * Longitude: -121.864000
Date/Time Start: 2009-11-17T00:00:00 * Date/Time End: 2010-05-19T00:00:00
Event(s):
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Sample ID | Sample ID | Tipple, Brett James | |||
| 2 | Species | Species | Tipple, Brett James | |||
| 3 | DATE/TIME | Date/Time | Tipple, Brett James | Geocode | ||
| 4 | Site | Site | Tipple, Brett James | |||
| 5 | LATITUDE | Latitude | Tipple, Brett James | Geocode | ||
| 6 | LONGITUDE | Longitude | Tipple, Brett James | Geocode | ||
| 7 | δ13C, bulk muscle tissue | δ13C bulk | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 8 | Alanine, δ13C | Ala δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 9 | Alanine, δ13C, standard deviation | Ala δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 10 | Aspartic acid, δ13C | Asp δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 11 | Aspartic acid, δ13C, standard deviation | Asp δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 12 | Glutamic acid, δ13C | Glu δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 13 | Glutamic acid δ13C, standard deviation | Glu δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 14 | Glycine, δ13C | Gly δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 15 | Glycine, δ15N, standard deviation | Gly δ15N std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 16 | Isoleucine, δ13C | Ile δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 17 | Isoleucine, δ13C, standard deviation | Ile δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 18 | Leucine, δ13C | Leu δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 19 | Leucine, δ13C, standard deviation | Leu δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 20 | Lysine, δ13C | Lys δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 21 | Lysine, δ13C, standard deviation | Lys δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 22 | Phenylalanine, δ13C | Phe δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 23 | Phenylalanine, δ13C, standard deviation | Phe δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 24 | Proline, δ13C | Pro δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 25 | Proline, δ13C, standard deviation | Pro δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 26 | Serine, δ13C | Ser δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 27 | Serine, δ13C, standard deviation | Ser δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 28 | Threonine, δ13C | Thr δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 29 | Threonine, δ13C, standard deviation | Thr δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 30 | Valine, δ13C | Val δ13C | ‰ PDB | Tipple, Brett James | see description in data abstract | vs. VPDB |
| 31 | Valine, δ13C, standard deviation | Val δ13C std dev | ± | Tipple, Brett James | see description in data abstract | vs. VPDB |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
112 data points