Fussmann, Dario; von Hoyningen-Huene, Avril; Reimer, Andreas; Schneider, Dominik; Karius, Volker; Riechelmann, Sylvia; Pederson, Chelsea; Swart, Peter K; Daniel, Rolf; Arp, Gernot: Total bacterial communiy based on RNA analysis of sediment pore-water from the Cinq Cases pool system, Aldabra atoll (Seychelles, Indian Ocean) [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.927612 (dataset in review), In: Fussmann, D et al.: Decoupling of pore water chemistry, bacterial community profiles, and carbonate mud diagenesis in a land-locked pool on Aldabra (Seychelles, Indian Ocean) [dataset bundled publication]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.927614 (dataset in review)
Related to:
Fussmann, Dario; von Hoyningen-Huene, Avril; Reimer, Andreas; Schneider, Dominik; Karius, Volker; Riechelmann, Sylvia; Pederson, Chelsea; Swart, Peter K; Daniel, Rolf; Arp, Gernot (in prep.): Decoupling of pore water chemistry, bacterial community profiles, and carbonate mud diagenesis in a land-locked pool on Aldabra (Seychelles, Indian Ocean).
Coverage:
Latitude: -9.429730 * Longitude: 46.495300
Date/Time Start: 2017-11-18T12:28:41 * Date/Time End: 2017-11-18T12:28:41
Minimum DEPTH, sediment/rock: -0.050 m * Maximum DEPTH, sediment/rock: 0.350 m
Event(s):
CC-K04 * Latitude: -9.429730 * Longitude: 46.495300 * Date/Time: 2017-11-18T12:28:41 * Elevation: 4.5 m * Location: Grande Terre, Seychelles * Method/Device: Rhizon sampler * Comment: Sampled in PVC tubes, 6.3 cm in diameter; using 5 cm CSS Rhizon samplers (Rhizosphere, Wageningen, Netherlands)
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Desulfobacterota | Desulfobacterota | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 2 | DEPTH, sediment/rock | Depth sed | m | Fussmann, Dario | Geocode | |
| 3 | Sample comment | Sample comment | Fussmann, Dario | |||
| 4 | Acidobacteria | Acidobacteria | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 5 | Actinobacteria | Actinobacteria | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 6 | Bacteroidetes | Bacteroidetes | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 7 | Chloroflexi | Chloroflexi | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 8 | Cyanobacteria | Cyanobacteria | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 9 | Desulfobacterota | Desulfobacterota | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 10 | Firmicutes | Firmicutes | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 11 | Myxococcota | Myxococcota | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 12 | Nitrospirae | Nitrospirae | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 13 | Planctomycetes | Planctomycetes | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | sum |
| 14 | Alphaproteobacteria | Alphaproteobacteria | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 15 | Gammaproteobacteria | Gammaproteobacteria | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 16 | Halomonas | Halomonas | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 17 | Bacteria, rare taxa | Bact rare t | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) | |
| 18 | Bacteria, unclassified | Bac unclassif | % | Fussmann, Dario | MiSeq sequencer (DNA sequencer) |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0) (License comes into effect after moratorium ends)
Size:
241 data points