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Osma, Natalia; Latorre-Melín, Laura; Jacob, Bárbara; Contreras, Paulina Y; von Dassow, Peter; Vargas, Cristian A (2020): Seawater carbonate chemistry and phytoplankton community structure [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.924054

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Abstract:
The interplay of coastal oceanographic processes usually results in partial pressures of CO2 (pCO2) higher than expected from the equilibrium with the atmosphere and even higher than those expected by the end of the century. Although this is a well-known situation, the natural variability of seawater chemistry at the locations from which tested organisms or communities originate is seldom considered in ocean acidification experiments. In this work, we aimed to evaluate the role of the carbonate chemistry dynamics in shaping the response of coastal phytoplankton communities to increased pCO2 levels. The study was conducted at two coastal ecosystems off Chile, the Valdivia River estuary and the coastal upwelling ecosystem in the Arauco Gulf. We characterized the seasonal variability (winter/summer) of the hydrographic conditions, the carbonate system parameters, and the phytoplankton community structure at both sites. The results showed that carbonate chemistry dynamics in the estuary were mainly related to seasonal changes in freshwater discharges, with acidic and corrosive conditions dominating in winter. In the Arauco Gulf, these conditions were observed in summer, mainly associated with the upwelling of cold and high pCO2 (>1,000 μatm) waters. Diatoms dominated the phytoplankton communities at both sites, yet the one in Valdivia was more diverse. Only certain phytoplankton groups in this latter ecosystem showed a significant correlations with the carbonate system parameters. When the impact of elevated pCO2 levels was investigated by pCO2 manipulation experiments, we did not observe any significant effect on the biomass of either of the two communities. Changes in the phytoplankton species composition and abundance during the incubations were related to other factors, such as competition and growth phases. Our findings highlight the importance of the natural variability of coastal ecosystems and the potential for local adaptation in determining responses of coastal phytoplankton communities to increased pCO2 levels.
Keyword(s):
Biomass/Abundance/Elemental composition; Coast and continental shelf; Community composition and diversity; Containers and aquaria (20-1000 L or < 1 m**2); Entire community; Laboratory experiment; Pelagos; South Pacific; Temperate
Supplement to:
Osma, Natalia; Latorre-Melín, Laura; Jacob, Bárbara; Contreras, Paulina Y; von Dassow, Peter; Vargas, Cristian A (2020): Response of Phytoplankton Assemblages From Naturally Acidic Coastal Ecosystems to Elevated pCO2. Frontiers in Marine Science, 7, https://doi.org/10.3389/fmars.2020.00323
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Coverage:
Median Latitude: -38.333300 * Median Longitude: -73.324950 * South-bound Latitude: -39.833300 * West-bound Longitude: -73.416600 * North-bound Latitude: -36.833300 * East-bound Longitude: -73.233300
Event(s):
Arauco_Gulf * Latitude: -36.833300 * Longitude: -73.233300 * Method/Device: Experiment (EXP)
Valdivia_estuary * Latitude: -39.833300 * Longitude: -73.416600 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-10-20.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventOsma, Natalia
2TypeTypeOsma, Nataliastudy
3LocationLocationOsma, Natalia
4TreatmentTreatOsma, Natalia
5Day of experimentDOEdayOsma, Natalia
6Temperature, waterTemp°COsma, Natalia
7SalinitySalOsma, Natalia
8pHpHOsma, Nataliatotal scale
9pH, standard deviationpH std dev±Osma, Nataliatotal scale
10ReplicatesRepl#Osma, Natalia
11Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmOsma, Natalia
12Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Osma, Natalia
13ReplicatesRepl#Osma, Natalia
14Nitrogen/Phosphorus ratioN/POsma, Natalia
15Nitrogen/Phosphorus ratio, standard deviationN/P std dev±Osma, Natalia
16ReplicatesRepl#Osma, Natalia
17Silicon/Nitrogen, molar ratioSi/NOsma, Natalia
18Silicon/Nitrogen ratio, standard deviationSi/N ratio std dev±Osma, Natalia
19ReplicatesRepl#Osma, Natalia
20Chlorophyll aChl aµg/lOsma, Natalia
21Chlorophyll a, standard deviationChl a std dev±Osma, Natalia
22ReplicatesRepl#Osma, Natalia
23Cell densityCells#/mlOsma, NataliaDiatoms
24Cell density, standard deviationCells std dev±Osma, NataliaDiatoms
25ReplicatesRepl#Osma, Natalia
26Cell densityCells#/mlOsma, NataliaDinoflagellates
27Cell density, standard deviationCells std dev±Osma, NataliaDinoflagellates
28ReplicatesRepl#Osma, Natalia
29Cell densityCells#/mlOsma, NataliaEuglenophytes
30Cell density, standard deviationCells std dev±Osma, NataliaEuglenophytes
31ReplicatesRepl#Osma, Natalia
32Cell densityCells#/mlOsma, NataliaFlagellates
33Cell density, standard deviationCells std dev±Osma, NataliaFlagellates
34ReplicatesRepl#Osma, Natalia
35Cell densityCells#/mlOsma, NataliaCiliates
36Cell density, standard deviationCells std dev±Osma, NataliaCiliates
37ReplicatesRepl#Osma, Natalia
38Cell densityCells#/mlOsma, NataliaSilicoflagellates
39Cell density, standard deviationCells std dev±Osma, NataliaSilicoflagellates
40ReplicatesRepl#Osma, Natalia
41Cell densityCells#/mlOsma, NataliaChlorophytes
42Cell density, standard deviationCells std dev±Osma, NataliaChlorophytes
43ReplicatesRepl#Osma, Natalia
44AbundanceAbund%Osma, NataliaThalassiosira spp.
45AbundanceAbund%Osma, NataliaAulacoseira granulata
46AbundanceAbund%Osma, NataliaChaetoceros spp.
47AbundanceAbund%Osma, NataliaThalassionema nitzschioides
48AbundanceAbund%Osma, NataliaSkeletonema costatum
49AbundanceAbund%Osma, NataliaOther diatoms
50AbundanceAbund%Osma, NataliaNitzschia spp.
51AbundanceAbund%Osma, NataliaPseudo-nitzschia delicatissima
52Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
54Carbon dioxide, standard deviationCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
55Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
56Fugacity of carbon dioxide in seawater, standard deviationfCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
57Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
58Bicarbonate ion, standard deviation[HCO3]- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
59Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
60Carbonate ion, standard deviation[CO3]2- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
61Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
62Carbon, inorganic, dissolved, standard deviationDIC std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
63Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
64Alkalinity, total, standard deviationAT std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
65Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
66Aragonite saturation state, standard deviationOmega Arg std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
67Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
68Calcite saturation state, standard deviationOmega Cal std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1224 data points

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