Citation:

PANGAEA.923618

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Related to:

Lantz, Coulson A; Kessler, A; Schulz, Kai Georg; Eyre, Bradley D (in review): Sediment topography enhances the response of coral reef carbonate sediment dissolution to ocean acidification. Journal of Geophysical Research: Biogeosciences

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-09-27.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Identification	ID		Lantz, Coulson A		Flume Number
2	Time point, descriptive	Time point		Lantz, Coulson A		Incubation Period
3	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Lantz, Coulson A
4	Treatment	Treat		Lantz, Coulson A		Topography
5	Salinity	Sal		Lantz, Coulson A
6	Temperature, water	Temp	°C	Lantz, Coulson A		Start
7	Oxygen	O2	mg/l	Lantz, Coulson A		Start
8	Alkalinity, total	AT	µmol/kg	Lantz, Coulson A		Start
9	pH	pH		Lantz, Coulson A		Start, total scale
10	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Lantz, Coulson A		Start
11	Carbon, inorganic, dissolved	DIC	µmol/kg	Lantz, Coulson A		Start
12	Aragonite saturation state	Omega Arg		Lantz, Coulson A		Start
13	Calcite saturation state	Omega Cal		Lantz, Coulson A		Start
14	Temperature, water	Temp	°C	Lantz, Coulson A		End
15	Oxygen	O2	mg/l	Lantz, Coulson A		End
16	Alkalinity, total	AT	µmol/kg	Lantz, Coulson A		End
17	pH	pH		Lantz, Coulson A		End, total scale
18	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Lantz, Coulson A		End
19	Carbon, inorganic, dissolved	DIC	µmol/kg	Lantz, Coulson A		End
20	Aragonite saturation state	Omega Arg		Lantz, Coulson A		End
21	Calcite saturation state	Omega Cal		Lantz, Coulson A		End
22	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
23	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
24	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
25	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
26	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
27	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
28	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
29	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
30	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	Start
31	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End
32	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End
33	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End
34	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End
35	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End
36	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End
37	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End
38	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	End

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Size:

1824 data points

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