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Lantz, Coulson A; Kessler, A; Schulz, Kai Georg; Eyre, Bradley D (2020): OA and ripples seawater chemistry data [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.923617, In: Lantz, CA et al. (2020): Sediment topography enhances the response of coral reef carbonate sediment dissolution to ocean acidification [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.923618

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX Citation

Related to:
Lantz, Coulson A; Kessler, A; Schulz, Kai Georg; Eyre, Bradley D (in review): Sediment topography enhances the response of coral reef carbonate sediment dissolution to ocean acidification. Journal of Geophysical Research: Biogeosciences
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-09-27.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
IdentificationIDLantz, Coulson AFlume Number
Time point, descriptiveTime pointLantz, Coulson AIncubation Period
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLantz, Coulson A
TreatmentTreatLantz, Coulson ATopography
SalinitySalLantz, Coulson A
Temperature, waterTemp°CLantz, Coulson AStart
OxygenO2mg/lLantz, Coulson AStart
Alkalinity, totalATµmol/kgLantz, Coulson AStart
pHpHLantz, Coulson AStart, total scale
10 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLantz, Coulson AStart
11 Carbon, inorganic, dissolvedDICµmol/kgLantz, Coulson AStart
12 Aragonite saturation stateOmega ArgLantz, Coulson AStart
13 Calcite saturation stateOmega CalLantz, Coulson AStart
14 Temperature, waterTemp°CLantz, Coulson AEnd
15 OxygenO2mg/lLantz, Coulson AEnd
16 Alkalinity, totalATµmol/kgLantz, Coulson AEnd
17 pHpHLantz, Coulson AEnd, total scale
18 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLantz, Coulson AEnd
19 Carbon, inorganic, dissolvedDICµmol/kgLantz, Coulson AEnd
20 Aragonite saturation stateOmega ArgLantz, Coulson AEnd
21 Calcite saturation stateOmega CalLantz, Coulson AEnd
22 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
24 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
25 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
26 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
27 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
28 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
29 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
30 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)Start
31 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
32 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
33 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
34 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
35 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
36 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
37 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
38 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)End
Size:
1824 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


ID
(Flume Number)

Time point
(Incubation Period)

pCO2water_SST_wet [µatm]

Treat
(Topography)

Sal

Temp [°C]
(Start)

O2 [mg/l]
(Start)

AT [µmol/kg]
(Start)

pH
(Start, total scale)
10 
pCO2water_SST_wet [µatm]
(Start)
11 
DIC [µmol/kg]
(Start)
12 
Omega Arg
(Start)
13 
Omega Cal
(Start)
14 
Temp [°C]
(End)
15 
O2 [mg/l]
(End)
16 
AT [µmol/kg]
(End)
17 
pH
(End, total scale)
18 
pCO2water_SST_wet [µatm]
(End)
19 
DIC [µmol/kg]
(End)
20 
Omega Arg
(End)
21 
Omega Cal
(End)
22 
CSC flag
23 
CO2 [µmol/kg]
(Start)
24 
fCO2water_SST_wet [µatm]
(Start)
25 
pCO2water_SST_wet [µatm]
(Start)
26 
[HCO3]- [µmol/kg]
(Start)
27 
[CO3]2- [µmol/kg]
(Start)
28 
DIC [µmol/kg]
(Start)
29 
Omega Arg
(Start)
30 
Omega Cal
(Start)
31 
CO2 [µmol/kg]
(End)
32 
fCO2water_SST_wet [µatm]
(End)
33 
pCO2water_SST_wet [µatm]
(End)
34 
[HCO3]- [µmol/kg]
(End)
35 
[CO3]2- [µmol/kg]
(End)
36 
DIC [µmol/kg]
(End)
37 
Omega Arg
(End)
38 
Omega Cal
(End)
4Day400Flat35.523.64.5825131812304.807.793803786787.42638402088.9262.6537260673.94187963131.28.9674868192263.208.051000000374.53908431901.9154.1260674576.128914910823.02784.42786.981988.70128.532140.252.023.089.12373.41374.521640.15252.551901.834.136.13
1Day400Flat35.623.85.0173974442307.607.791249412794.28910922097.8682.5791711383.84053217330.59.0026025562263.208.067000000358.45893981898.3004.1442200416.170978792823.06790.35792.921990.11129.102142.282.033.098.86357.01358.081633.44255.091897.384.156.17
4Day400Flat35.524.04.6718984472328.107.873407452639.83233672066.7523.1338537284.65177786631.48.6668101552286.908.056000000372.79147261917.6114.2331533846.283538071818.65642.12644.201950.78153.692123.122.423.689.04371.67372.771649.68258.801917.524.236.28
1Day400Flat35.623.95.0816445292356.707.855094643683.33465422117.5592.8819246234.30464626929.68.4458355472332.408.048000000392.70636771981.1334.0265052926.014272838819.86682.36684.581989.12150.022159.012.363.599.91391.13392.311721.23249.111980.254.036.02
1Day400Flat35.523.14.7046318542357.657.819223705753.37035232134.9632.7228538674.06288356629.99.0536814572312.208.057000000378.57891191954.2954.0900196036.102888457822.32750.71753.182024.04136.152182.512.143.269.50377.43378.561692.50252.221954.224.096.10
4Day400Flat35.423.35.0173493982374.407.845744691705.93313582134.3392.9143100454.34408110430.29.1826506022325.608.069000000367.22981331955.2314.2385884606.318055303820.88705.64707.952019.38145.142185.402.283.479.16366.49367.591686.29260.541955.994.246.31
1Night400Flat35.524.49.1000189112280.657.991420776457.42904282019.9232.9382942834.47028193123.85.8998108862307.607.796000000783.59307562140.7252.0465392003.113577581813.10455.54457.011811.79190.092014.973.004.5522.81781.05783.581987.82130.082140.702.053.11
3Night400Flat35.523.89.0882296362300.808.072940010367.06635141989.9273.4563798855.25539794524.04.5117703642339.607.803000000780.41395402166.7942.1199286103.223334481810.69366.06367.251762.76218.251991.703.435.2222.60777.88780.402009.55134.622166.772.123.22
1Night400Flat35.623.88.1637746422329.808.056795169389.43425052026.7893.3922484845.15940616923.95.0622535772356.707.867000000663.63445732153.8712.4120797393.668628388811.32387.93389.191800.33215.252026.913.385.1519.24661.04663.181980.51153.532153.282.413.67
4Night400Flat35.523.88.0452456192335.857.993226802466.91180162073.8942.9714069984.52724654223.36.1475438062374.407.903000000607.25828182157.1262.5506267283.886144187813.58465.08466.591864.05192.092069.723.024.6017.90605.27607.251976.73162.462157.102.553.89
3Night400Flat35.624.38.0605352922336.507.992271136468.10073952072.5432.9974176794.56289975823.64.3194647082366.457.794000000808.17282562198.9432.0766789493.161280438813.42465.75467.251857.58195.002065.993.074.6723.62805.05807.682042.44132.362198.422.083.16
1Night400Flat35.523.89.0081285912341.708.040864058410.15495282054.0793.2276878514.92055331223.14.5618714092357.657.839000000714.93106992173.5232.2206449643.385334158811.92408.26409.581825.98209.982047.893.305.0321.19712.59714.922010.75141.562173.502.223.39
2Day400Rippled35.623.84.8916349122316.807.842705939693.32736292077.0172.8950458324.30487677730.99.1240000002264.508.075000000349.62417071890.1474.2550747586.327213307820.22692.90695.151964.19143.452127.862.263.438.56348.21349.241619.35261.301889.214.266.33
2Day400Rippled35.524.24.0462926762326.807.891702487607.24268572051.8833.2831472864.86645315631.88.0337073242282.508.069000000357.27997371900.9424.3705103116.478199679817.66610.99612.961933.77160.082111.502.523.838.59356.21357.261625.70266.561900.854.376.48
3Day400Rippled35.424.05.5252627272339.607.916877327570.93913832060.1103.3063401964.92332816130.58.8847372732279.508.060576995368.07810321916.9744.1314009806.151890483816.70574.51576.381928.64167.562112.892.644.029.12367.34368.441655.08253.521917.724.136.15
3Day400Rippled35.523.65.3321650362366.457.840068939714.29302592128.4292.8936309954.31027561830.49.1783496362326.408.079000000356.35348311947.1554.3382084126.462079644820.94713.53715.852012.33144.672177.942.273.468.84355.27356.341671.46266.771947.074.346.46
3Day400Rippled35.523.25.3885549522367.207.902984265600.12920432089.1963.3196770924.93456402331.010.0144504802310.358.066000000366.56195051935.6694.2956638216.385328320817.89603.41605.381971.75161.452151.102.533.868.97365.46366.551663.37263.241935.584.306.39
2Day400Rippled35.623.44.3592917562370.057.826338675742.33170482135.9982.8642041274.26050662630.89.0070824372310.608.099000000332.71203471915.3914.5060679616.702780793821.83740.48742.902026.28140.422188.542.203.368.17331.35332.341629.39276.871914.424.516.71
4Night400Rippled35.624.57.1449398292275.707.955785332503.56081792035.8792.7257636924.14936716323.64.5250601712304.807.805000000764.21069532135.3802.0657525593.144647447814.36501.10502.721835.37178.452028.182.814.2722.33761.25763.731980.86131.662134.852.073.15
2Night400Rippled35.624.48.3000966292281.408.005547199439.99008582012.8653.0162498944.58888256423.83.9999033712316.807.790000000799.26792192152.1112.0305880973.089309784812.58437.77439.181799.12195.442007.143.084.6823.24796.19798.771999.05129.312151.592.033.09
2Night400Rippled35.524.08.7103815542293.808.066931016372.01235081985.3823.4315109815.21449915124.24.6961844562326.807.812000000757.97272962149.2802.1613194613.284325348810.78370.99372.201759.87216.491987.143.415.1821.83755.52757.961990.29137.132149.252.163.28
4Night400Rippled35.523.98.9205285712315.308.069120270373.52287652005.3533.4558478155.25458893624.05.3139471432328.107.829000000725.02174132144.0902.2199711423.375448349810.85372.40373.611776.54218.842006.223.445.2420.99722.67725.011982.09140.982144.062.223.38
3Night400Rippled35.523.78.3548378572327.058.039876332408.53438332040.3913.2116306684.89466515723.25.8915162142367.207.889000000628.53595042158.0472.4664600523.758992651811.91406.80408.131816.43207.642035.983.274.9718.58626.48628.531982.27157.172158.022.473.76
2Night400Rippled35.623.88.0973567182343.758.034347979417.85658732057.1063.2249800914.91216890123.44.5012643282370.057.819000000757.88727992192.4422.1697410013.304868238812.14415.83417.181832.64208.082052.853.274.9822.26754.94757.412031.23138.402191.902.173.31
1Day1000Flat35.423.16.1200000002355.707.6135440201293.76188202227.7621.8134682862.70595149729.97.8900000002350.607.802786518785.10741652136.7412.6306947983.925369185837.871273.111277.292137.0889.322264.281.402.1419.72783.29785.661955.63161.932137.292.633.92
4Day1000Flat35.623.86.4600000002299.707.6155440201256.03736502172.3231.7833190132.66005203430.08.0900000002297.707.800786518770.97810322087.4262.5689417703.831910460836.101237.081241.102078.5089.972204.581.412.1519.28768.09770.411908.90158.622086.802.573.84
1Day1000Flat35.623.86.4500000002356.707.6093616981308.30142902230.4481.7988657922.68416250824.89.5600000002348.207.843000000703.36706732113.7532.8362891594.232145087837.591288.241292.422133.8691.062262.511.432.1819.98702.26704.511980.35150.152150.482.373.60
4Day1000Flat35.524.35.6400000002304.507.6220000001237.82428402174.8841.8039589782.69176226324.68.6100000002318.207.851113888678.88288312081.5712.8417845394.240344972835.221221.741225.692076.7992.732204.741.462.2219.41678.61680.791951.55149.322120.282.363.58
1Day1000Flat35.423.76.3400000002359.807.6163944701286.60000002230.5431.8272588412.72652895824.38.5600000002367.807.850000000696.02936682128.2642.8986518064.325198987837.151268.231272.362135.2191.852264.201.452.2020.07696.04698.291999.57150.582170.222.383.61
4Day1000Flat35.523.86.3400000002317.607.6090000001287.50292702192.2641.7737263502.64574333124.57.9500000002324.507.855000000673.51512822084.5932.8806247274.296826091837.031268.271272.392098.5189.282224.821.402.1419.31673.48675.651955.35150.402125.062.373.60
1Night1000Flat35.624.27.5200000002289.607.710300000969.85441792163.0831.6654097152.53888779523.16.1200000002355.707.6135440201276.66414102263.9181.4040376342.140430658827.96968.04971.172018.23110.282156.471.742.6437.801271.861276.032136.0489.692263.531.412.14
3Night1000Flat35.623.87.8200000002215.607.719000000917.87384342085.5581.6697364752.54180130123.65.7500000002305.407.6168105331240.27870802211.0721.4093042932.145351402826.69914.68917.651950.19107.122084.001.682.5636.251235.621239.652084.6089.832210.681.412.15
1Night1000Flat35.625.68.0100000002309.707.776075718826.29229172151.3561.9688586892.99539548323.86.4500000002356.707.6093616981293.07322802262.9081.4297996122.175278156822.99824.50827.121983.77132.772139.532.103.1837.591288.241292.422133.8691.062262.511.432.18
3Night1000Flat35.526.08.1900000002299.607.756000000866.73455252150.1881.8828488372.86454123523.85.2100000002361.607.6140000001280.74388802265.9741.4467416022.201053476823.92866.00868.741984.42128.392136.732.043.0837.271276.581280.732136.7391.952265.961.452.20
1Night1000Flat35.623.48.2000000002314.507.706693701990.83803232185.1881.7091758722.60107921223.76.3400000002359.807.6163944701271.72683302263.8351.4473681322.202651711829.09986.53989.752049.50107.832186.421.692.5837.071266.961271.092134.1592.222263.441.452.21
3Night1000Flat35.623.38.2200000002345.607.720000000970.32410072210.9631.7670564112.69073268123.55.5800000002398.907.6070000001323.46413502306.5531.4323369742.181048598828.57966.28969.442071.14111.942211.651.762.6838.781318.501322.812176.0491.342306.161.432.18
2Day1000Rippled35.523.25.9500000002355.907.6218105331266.02943402226.8071.8170027702.71492620029.59.0100000002359.707.858121371678.68478312119.5102.8920278724.321205434836.971246.691250.772132.2091.382260.551.432.1917.19676.62678.671923.53178.742119.462.894.32
3Day1000Rippled35.623.65.7500000002305.407.6168105331254.65695102178.9781.7724499532.64655488028.89.1300000002310.607.828121371720.40856312087.9302.6930867524.021214746836.251235.621239.652084.6089.832210.681.412.1518.53718.18720.381913.22162.152093.902.613.91
2Day1000Rippled35.523.54.8900000002374.207.6110000001311.98658302248.9331.7915133292.67684043024.57.2300000002365.607.826893787740.70969142141.4262.7335506554.084412208838.031292.261296.472151.9290.962280.901.432.1821.19738.95741.332010.98144.982177.162.293.47
3Day1000Rippled35.423.85.2100000002361.607.6140000001294.70038402236.0851.7860446532.66957420924.48.7600000002370.307.833000000730.12083082143.4022.7613320954.127321750837.311277.221281.382137.2691.772266.341.442.2020.97729.01731.362012.70146.292179.962.313.51
2Day1000Rippled35.623.65.1200000002425.707.6220000001304.19269302292.3571.8938219492.82681767924.68.6500000002430.907.846000000723.13084062189.8882.9458806974.397175585837.681284.351288.532192.8595.632326.161.502.2920.64721.89724.222052.24155.542228.422.453.72
3Day1000Rippled35.523.55.5800000002398.907.6070000001338.18826702278.3791.7492327542.61983276724.28.9100000002409.707.841000000727.09158132180.5692.7920323174.181637768838.821319.151323.452176.5691.162306.541.432.1820.96725.37727.712042.80150.472214.242.373.60
2Night1000Rippled35.524.17.4500000002279.707.722742576935.34860052148.0761.7068765792.60135432223.25.9500000002355.907.6218105331250.78310202260.5641.4339896872.185462801827.05933.70936.722003.89112.012142.951.762.6836.971246.691250.772132.2091.382260.551.432.19
4Night1000Rippled35.523.97.5700000002256.607.709000000959.96779452127.8731.6795226212.55520342823.86.4600000002299.707.6155440201241.73390602204.9701.4126849592.149240150827.87957.02960.121992.33107.102127.301.692.5636.141237.701241.722079.0289.792204.951.412.15
2Night1000Rippled35.625.48.2300000002278.507.767000000834.05448332127.1901.8859415832.87176154823.54.8900000002374.207.6110000001296.48377002280.9211.4292235182.176307676823.33832.54835.191963.96127.792115.082.023.0637.991291.621295.842151.4091.142280.531.432.18
4Night1000Rippled35.524.98.0400000002256.707.756075718850.52834202106.1001.8812258382.85784807524.35.6400000002304.507.6220000001225.70314902204.7601.4621280532.221179275824.08848.37851.091956.78121.622102.481.922.9235.221221.741225.692076.7992.732204.741.462.22
2Night1000Rippled35.523.28.1200000002356.707.711000000998.01888292224.7341.7498610712.66377312523.65.1200000002425.707.6220000001289.18423002326.5641.5003042052.283878466829.48994.03997.292087.65109.862227.001.722.6337.711284.991289.172193.3995.442326.551.502.28
4Night1000Rippled35.523.48.0800000002276.407.729000000919.92234912138.9951.7647387772.68485015823.86.3400000002317.607.6090000001272.40376702224.8391.4046031502.136944593827.03916.33919.332003.51110.712141.261.742.6537.031268.271272.392098.5189.282224.821.402.14