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Li, Keqiang; Li, Min; He, Yunfeng; Gu, Xingyan; Pang, Kai; Ma, Yunpeng (2020): Seawater carbonate chemistry and growth and enzyme activities of Nitzschia closterium [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.917678

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Abstract:
In this study, Nitzschia closterium was incubated in seawater at different pH values (8.10, 7.71, and 7.45) and using different nitrogen forms (NO3–N and NH4–N) in the laboratory. The results showed that the growth of N. closterium was inhibited by ocean acidification, with individuals under lower pH levels showing lower growth rates and lower nitrogen uptake rates for both nitrogen forms. The Vmax/Ks ratio decreased with decreasing pH, indicating the inhibition of nitrogen uptake, whereas the ratios for NH4–N cultures were higher than those for NO3–N cultures, implying the highly competitive position of NH4–N. Acidification might induce reactive oxygen species based on the result that the maximum enzyme activities of SuperOxide Dismutase (SOD) and CATalase (CAT) increased under lower pH levels. The SOD and CAT activities for the NO3–N cultures were higher than those for NH4–N cultures at the low pH level, indicating that acidification might cause more oxidative stress for NO3–N cultures than for NH4–N cultures. Thus, ocean acidification might have a more detrimental effect on the growth of N. closterium under NO3–N conditions than NH4–N conditions, with a lower ratio (γ) of the maximum growth rate to the maximum nutrient uptake rate, and a drop in nitrate reductase activity under lower pH levels.
Keyword(s):
Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Laboratory experiment; Laboratory strains; Macro-nutrients; Nitzschia closterium; Not applicable; Ochrophyta; Other metabolic rates; Pelagos; Phytoplankton; Single species
Supplement to:
Li, Keqiang; Li, Min; He, Yunfeng; Gu, Xingyan; Pang, Kai; Ma, Yunpeng (2020): Effects of pH and nitrogen form on Nitzschia closterium growth by linking dynamic with enzyme activity. Chemosphere, 249, 126154, https://doi.org/10.1016/j.chemosphere.2020.126154
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-05-6.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeLi, Keqiangstudy
2SpeciesSpeciesLi, Keqiang
3Registration number of speciesReg spec noLi, Keqiang
4Uniform resource locator/link to referenceURL refLi, KeqiangWoRMS Aphia ID
5TreatmentTreatLi, Keqiang
6Time in hoursTimehLi, Keqiang
7pHpHLi, Keqiang
8pH, standard deviationpH std dev±Li, Keqiang
9Chlorophyll aChl aµg/lLi, Keqiang
10Chlorophyll a, standard deviationChl a std dev±Li, Keqiang
11Nitrogen, particulatePNµmol/lLi, Keqiang
12Nitrogen, particulate, standard deviationPN std dev±Li, Keqiang
13BiomassBiomg/lLi, KeqiangFinal
14Biomass, standard deviationBiom std dev±Li, KeqiangFinal
15Growth rate, maximumµ maxµg/l/hLi, Keqiang
16Growth rate, maximum, standard deviationµ max std dev±Li, Keqiang
17Nitrogen, inorganic, dissolvedDINµmol/lLi, Keqiang
18Dissolved inorganic nitrogen, standard deviationDIN std dev±Li, Keqiang
19Nitrate[NO3]-µmol/lLi, Keqiang
20Nitrite[NO2]-µmol/lLi, Keqiang
21Ammonium[NH4]+µmol/lLi, Keqiang
22Maximum nutrient uptake rateVmaxµmol/L/hLi, Keqiang
23Maximum nutrient uptake rate, standard deviationVmax std dev±Li, Keqiang
24Half saturation concentrationKsµmol/lLi, Keqiang
25Half saturation concentration, standard deviationKs std dev±Li, Keqiang
26Minimum concentration thresholdCminµmol/lLi, Keqiang
27Minimum concentration threshold, standard deviationCmin std dev±Li, Keqiang
28RatioRatioLi, Keqiangmaximum growth rate to the maximum nutrient uptake rate
29Ratio, standard deviationRatio std dev±Li, Keqiangmaximum growth rate to the maximum nutrient uptake rate
30RatioRatioLi, KeqiangVmax/Ks (1/h)
31Ratio, standard deviationRatio std dev±Li, KeqiangVmax/Ks
32Superoxide dismutase activity, unit per protein massSOD/protU/mgLi, Keqiang
33Superoxide dismutase activity, standard deviationSOD std dev±Li, Keqiang
34Catalase activity, unit per protein massCAT/protU/mgLi, Keqiang
35Catalase activity, standard deviationCAT std dev±Li, Keqiang
36Nitrate reductase activityNRµg/mg/hLi, Keqiang
37Nitrate reductase activity, standard deviationNO3 reduct act std dev±Li, Keqiang
38SalinitySalLi, Keqiang
39Temperature, waterTemp°CLi, Keqiang
40Temperature, water, standard deviationTemp std dev±Li, Keqiang
41Carbon, inorganic, dissolvedDICµmol/kgLi, Keqiang
42Alkalinity, totalATµmol/kgLi, Keqiang
43Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
45Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3075 data points

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