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Kloster, Michael; Beszteri, Bánk; Nattkemper, Tim W (2024): Annotated Southern Ocean diatom LM micrographs from Polarstern cruises PS79 & PS103 [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.914544

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Published: 2024-12-04 • DOI registered: 2025-01-02

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Abstract:
Several sets of annotated (taxon, expedition, station) high resolution focus-enhanced light micoscopy images depicting valves of the Southern Ocean diatom species and genera Fragilariopsis kerguelensis, Pseudonitzschia, Chaetoceros, Thalassiosira lentiginosa, Fragilariopsis rhombica, Rhizosolenia, Asteromphalus, Thalassiosira gracilis and Nitzschia, plus the non-diatom taxon silicoflagellates. Objects are imaged with and without background masking. Pixel size is 0.098 x 0.098 µm².
Keyword(s):
deep learning; diatoms; Southern Ocean; Taxonomy
Related to:
Kloster, Michael; Langenkämper, D; Zurowietz, M; Beszteri, Bánk; Nattkemper, Tim W (2020): Deep learning-based diatom taxonomy on virtual slides. Scientific Reports, 10(1), 14416, https://doi.org/10.1038/s41598-020-71165-w
Other version:
Annotated Southern Ocean diatom LM micrographs from PS79 & PS103 - download all (672 MB)
Coverage:
Median Latitude: -50.745298 * Median Longitude: 3.913367 * South-bound Latitude: -66.001220 * West-bound Longitude: -0.002830 * North-bound Latitude: -39.234000 * East-bound Longitude: 11.365830
Date/Time Start: 2011-12-05T13:23:00 * Date/Time End: 2016-12-27T14:17:00
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
8 datasets

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Download ZIP file containing all datasets as tab-delimited text — use the following character encoding:

Datasets listed in this publication series

  1. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS79, 10 p - masked. https://doi.pangaea.de/10.1594/PANGAEA.914533
  2. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS79, 10 p - unmasked. https://doi.pangaea.de/10.1594/PANGAEA.914534
  3. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS79, 100 p - masked. https://doi.pangaea.de/10.1594/PANGAEA.914536
  4. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS79, 100 p - unmasked. https://doi.pangaea.de/10.1594/PANGAEA.914538
  5. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS103, 10 p - masked. https://doi.pangaea.de/10.1594/PANGAEA.914539
  6. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS103, 10 p - unmasked. https://doi.pangaea.de/10.1594/PANGAEA.914540
  7. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS103, 100 p - masked. https://doi.pangaea.de/10.1594/PANGAEA.914542
  8. Kloster, M; Beszteri, B; Nattkemper, TW (in review): Annotated Southern Ocean diatom LM micrographs from POLARSTERN cruise PS103, 100 p - unmasked. https://doi.pangaea.de/10.1594/PANGAEA.914543