Vad, Johanne; Durán Suja, Laura (2020): Results of the cold-water sponge Halichondria panicea exposure experiment to Benzo-A-Pyrene [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.911441
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Published: 2020-01-28 • DOI registered: 2020-06-17
Abstract:
In this study, inter-tidal cold-water sponge Halichondria panicea samples were exposed to Benzo-A-pyrene for 48h (accumulation phase) and then left to recover for 13 days in clean seawater (depuration phase). Tissue samples were collected at multiple time points during the accumulation phase to conduct qPCR targeting several genes of interest. Tissue samples were also collected during the accumulation and depuration phases to determine concentration of hydrocarbon in the sponge tissue. The files provided here detail (1) the hydrocarbon data determined by GC/MS analysis and (2) the sponge log fold change data for four genes of interest derived by qPCR.
Project(s):
Funding:
Horizon 2020 of the European Commission (H2020), grant/award no. 678760: A Trans-Atlantic assessment and deep-water ecosystem-based spatial management plan for Europe
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Sample ID | Sample ID | Vad, Johanne | |||
| 2 | Treatment | Treat | Vad, Johanne | |||
| 3 | Time in hours | Time h | h | Vad, Johanne | ||
| 4 | Halichondria panicea, heat shock protein 70, log fold change | H. panicea Hsp70 logFC | Vad, Johanne | Calculated | ||
| 5 | Halichondria panicea, heat shock protein 90, log fold change | H. panicea Hsp90 logFC | Vad, Johanne | Calculated | ||
| 6 | Halichondria panicea, cyclophilin | H. panicea cyclophilin | Vad, Johanne | Calculated | ||
| 7 | Halichondria panicea, cytochrome b5 | H. panicea cytochrome b5 | Vad, Johanne | Calculated |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
429 data points