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Stapp, Laura; Parker, Laura M; O'Connor, Wayne A; Bock, Christian; Ross, Pauline M; Pörtner, Hans-Otto; Lannig, Gisela (2018): Tisssue respiration and fractional contribution of ion transporters to total tissue respiration of wild and selected oysters Saccostrea glomerata [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.884107, In supplement to: Stapp, L et al. (2018): Sensitivity to ocean acidification differs between populations of the Sydney rock oyster: Role of filtration and ion-regulatory capacities. Marine Environmental Research, 135, 103-113, https://doi.org/10.1016/j.marenvres.2017.12.017

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Keyword(s):
Animalia; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Laboratory experiment; Mollusca; Other metabolic rates; Respiration; Saccostrea glomerata; Single species; South Pacific; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: -32.700000 * Longitude: 152.050000
Date/Time Start: 2015-03-01T00:00:00 * Date/Time End: 2015-03-31T00:00:00
Event(s):
Cromarty_Bay * Latitude: -32.700000 * Longitude: 152.050000 * Date/Time Start: 2015-03-01T00:00:00 * Date/Time End: 2015-03-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-12-14.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeStapp, Laurastudy
2SpeciesSpeciesStapp, Laura
3Registration number of speciesReg spec noStapp, Laura
4Uniform resource locator/link to referenceURL refStapp, LauraWoRMS Aphia ID
5Experiment durationExp durationdaysStapp, Laura
6FigureFigStapp, Laura
7TableTabStapp, Laura
8TreatmentTreatStapp, Laura
9IdentificationIDStapp, Lauratank
10CategoryCatStapp, Lauraoyster line
11IdentificationIDStapp, Lauraanimal
12Oxygen consumption, per proteinO2 con/proteinµmol/g/minStapp, LauraMantle tissue, total
13PercentagePerc%Stapp, LauraMantle tissue,Na+/K+-ATPase, % to total oxygen consumption
14Oxygen demand, net, per dry massO2 demnmol/mg/minStapp, LauraMantle tissue,Na+/K+-ATPase
15PercentagePerc%Stapp, LauraMantle tissue,Na+/H+-exchanger, % to total oxygen consumption
16Oxygen demand, net, per dry massO2 demnmol/mg/minStapp, LauraMantle tissue,Na+/H+-exchanger
17PercentagePerc%Stapp, LauraMantle tissue,H+-ATPase, % to total oxygen consumption
18Oxygen demand, net, per dry massO2 demnmol/mg/minStapp, LauraMantle tissue,H+-ATPase
19Oxygen consumption, per proteinO2 con/proteinµmol/g/minStapp, LauraGill tissue, total
20PercentagePerc%Stapp, LauraGill tissue,Na+/K+-ATPase, % to total oxygen consumption
21Oxygen demand, net, per dry massO2 demnmol/mg/minStapp, LauraGill tissue,Na+/K+-ATPase
22PercentagePerc%Stapp, LauraGill tissue,Na+/H+-exchanger, % to total oxygen consumption
23Oxygen demand, net, per dry massO2 demnmol/mg/minStapp, LauraGill tissue,Na+/H+-exchanger
24PercentagePerc%Stapp, LauraGill tissue,H+-ATPase, % to total oxygen consumption
25Oxygen demand, net, per dry massO2 demnmol/mg/minStapp, LauraGill tissue,H+-ATPase
26SalinitySalStapp, Laura
27Temperature, waterTemp°CStapp, Laura
28pHpHStapp, LauraNBS scale
29Alkalinity, totalATµmol/kgStapp, Laura
30Carbon, inorganic, dissolvedDICµmol/kgStapp, Laura
31Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmStapp, LauraCalculated using CO2SYS
32Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetPaStapp, LauraCalculated using CO2SYS
33Calcite saturation stateOmega CalStapp, LauraCalculated using CO2SYS
34Aragonite saturation stateOmega ArgStapp, LauraCalculated using CO2SYS
35Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
37Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
1890 data points

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