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Stapp, Laura; Parker, Laura M; O'Connor, Wayne A; Bock, Christian; Ross, Pauline M; Pörtner, Hans-Otto; Lannig, Gisela (2018): Extracellular acid-base parameters of wild and selected Saccostrea glomerata [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.884091, In supplement to: Stapp, L et al. (2018): Sensitivity to ocean acidification differs between populations of the Sydney rock oyster: Role of filtration and ion-regulatory capacities. Marine Environmental Research, 135, 103-113, https://doi.org/10.1016/j.marenvres.2017.12.017

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Keyword(s):
Acid-base regulation; Animalia; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Laboratory experiment; Mollusca; Saccostrea glomerata; Single species; South Pacific; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: -32.700000 * Longitude: 152.050000
Date/Time Start: 2015-03-01T00:00:00 * Date/Time End: 2015-03-31T00:00:00
Event(s):
Cromarty_Bay * Latitude: -32.700000 * Longitude: 152.050000 * Date/Time Start: 2015-03-01T00:00:00 * Date/Time End: 2015-03-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-12-14.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeStapp, Laurastudy
2SpeciesSpeciesStapp, Laura
3Registration number of speciesReg spec noStapp, Laura
4Uniform resource locator/link to referenceURL refStapp, LauraWoRMS Aphia ID
5Experiment durationExp durationdaysStapp, Laura
6FigureFigStapp, Laura
7TreatmentTreatStapp, Laura
8IdentificationIDStapp, Lauratank
9CategoryCatStapp, Lauraoyster line
10IdentificationIDStapp, Lauraanimal
11pH, extracellularpHeStapp, LauraNBS scale
12Haemolymph, partial pressure of carbon dioxidepCO2 (ha)kPaStapp, Laura
13Haemolymph, bicarbonate ion[HCO3]- (ha)mmol/lStapp, Laura
14SalinitySalStapp, Laura
15Temperature, waterTemp°CStapp, Laura
16pHpHStapp, LauraNBS scale
17Alkalinity, totalATµmol/kgStapp, Laura
18Carbon, inorganic, dissolvedDICµmol/kgStapp, Laura
19Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmStapp, LauraCalculated using CO2SYS
20Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetPaStapp, LauraCalculated using CO2SYS
21Calcite saturation stateOmega CalStapp, LauraCalculated using CO2SYS
22Aragonite saturation stateOmega ArgStapp, LauraCalculated using CO2SYS
23Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
25Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
1333 data points

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