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PANGAEA.
Data Publisher for Earth & Environmental Science

Reintjes, Greta (2017): Analysis of the microbial community composition with depth along the Atlantic Meridional Transect 22 (AMT22, JC079). PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.878060 (unpublished dataset)

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Coverage:
Median Latitude: -12.139736 * Median Longitude: -30.882678 * South-bound Latitude: -45.500000 * West-bound Longitude: -51.319000 * North-bound Latitude: 47.881800 * East-bound Longitude: -17.266600
Date/Time Start: 2012-10-13T13:01:00 * Date/Time End: 2012-11-21T00:00:00
Minimum DEPTH, water: 20 m * Maximum DEPTH, water: 300 m
Event(s):
JC079-02 (ATM22_JC079_CTD-4) * Latitude: 47.881800 * Longitude: -17.266600 * Date/Time: 2012-10-13T13:01:00 * Campaign: JC079 (ATM22) * Basis: James Cook * Method/Device: CTD/Rosette (CTD-RO) * Comment: PE Curves
JC079-03 (ATM22_JC079_CTD-6) * Latitude: 44.759900 * Longitude: -19.324500 * Date/Time: 2012-10-14T13:03:00 * Campaign: JC079 (ATM22) * Basis: James Cook * Method/Device: CTD/Rosette (CTD-RO) * Comment: PE Curves
JC079-04 (ATM22_JC079_CTD-8) * Latitude: 41.654200 * Longitude: -21.264900 * Date/Time: 2012-10-15T13:03:00 * Campaign: JC079 (ATM22) * Basis: James Cook * Method/Device: CTD/Rosette (CTD-RO) * Comment: PE Curves
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventReintjes, Greta
2Optional event labelEvent 2Reintjes, Greta
3Latitude of eventLatitudeReintjes, Greta
4Longitude of eventLongitudeReintjes, Greta
5Date/Time of eventDate/TimeReintjes, Greta
6DEPTH, waterDepth watermReintjes, GretaGeocode
7CommentCommentReintjes, GretaOceanic province according to Longhurst 2008
8VolumeVolmlReintjes, Greta
9CellCell#/mlReintjes, GretaManual microscopy
10CellCell#/mlReintjes, GretaAutomatic microscopy, Bennke et al 2016
11Archaea, targed with ARCH915 oligonucleotide FISH-probeARCH915%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
12Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probeEury806%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
13Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probeCren554%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
14Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probeEUB338 I-III%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
15SAR11 mix, targeted with SAR11-152R mix oligonucleotide FISH-probeSAR11%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
16Bacteroidetes, targeted with CF319a oligonucleotide FISH-probeCF319a%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
17Cyanobacteria, targeted with CYA664 oligonucleotide FISH-probeCYA664%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
18Synechococcus, targeted with SYN405 oligonucleotide FISH-probeSYN405%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
19Prochlorococcus, targeted with PRO405 oligonucleotide FISH-probePRO405%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
20SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probeSAR202-312R%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
21SAR324 clade, targeted with SAR324-1412 oligonucleotide FISH-probeSAR324-1412%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
22SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probeSAR406-97%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
23SAR86 clade, targeted with SAR86-1245 oligonucleotide FISH-probeSAR86-1245%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)Helper SAR86/1245h5 and SAR86/1245h3
24Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probeGam42a%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
25Eukarya, targeted with EUK516 oligonucleotide FISH-probeEUK516%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
26Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probeROS537%Reintjes, GretaCatalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
Size:
2126 data points

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