Guidi, Lionel; Picheral, Marc; Pesant, Stephane; Tara Oceans Consortium, Coordinators; Tara Oceans Expedition, Participants (2017): Environmental context of all samples from the Tara Oceans Expedition (2009-2013), about sensor data in the targeted environmental feature [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.875576, In: Tara Oceans Consortium, Coordinators; Tara Oceans Expedition, Participants (2017): Registry of all samples from the Tara Oceans Expedition (2009-2013) [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.875582
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Abstract:
The Tara Oceans Expedition (2009-2013) sampled the world oceans on board a 36 m long schooner, collecting environmental data and organisms from viruses to planktonic metazoans for later analyses using modern sequencing and state-of-the-art imaging technologies. Tara Oceans Data are particularly suited to study the genetic, morphological and functional diversity of plankton. Data sets in this collection provide methodological and environmental context to all samples collected during the Tara Oceans Expedition (2009-2013).
Related to:
Pesant, Stephane; Not, Fabrice; Picheral, Marc; Kandels-Lewis, Stefanie; Le Bescot, Noan; Gorsky, G; Iudicone, Daniele; Karsenti, Eric; Speich, Sabrina; Troublé, Romain; Dimier, Céline; Searson, Sarah; Acinas, Silvia G; Bork, Peer; Boss, Emmanuel; Bowler, Chris; De Vargas, Colomban; Follows, Michael J; Grimsley, Nigel; Hingamp, Pascal; Jaillon, Olivier; Karp-Boss, Lee; Krzic, Uros; Ogata, Hiroyuki; Raes, Jeroen; Reynaud G., Emmanuel; Sardet, Christian; Sieracki, Michael E; Stemmann, Lars; Sullivan, Matthew B; Sunagawa, Shinichi; Velayoudon, Didier; Weissenbach, Jean; Wincker, Patrick (2015): Open science resources for the discovery and analysis of Tara Oceans data. Scientific Data, 2, 150023, https://doi.org/10.1038/sdata.2015.23
Pesant, Stephane; Tara Oceans Consortium, Coordinators; et al. (in prep.): Methodological and environmental context of Tara Oceans samples. Scientific Data
Picheral, Marc; et al. (in prep.): Tara Oceans Data: Properties of seawater and particulate & dissolved matter from physical, optical and imaging sensors mounted on the vertical profile sampling system. Scientific Data
Speich, Sabrina; et al. (in prep.): Tara Oceans Data: Atmospheric and oceanographic context at the mesoscale, from remote sensing, arrays of Argo drifters and an onboard meteorological station.
Other version:
Tara Oceans Consortium, Coordinators; Tara Oceans Expedition, Participants (2015): Environmental context of all samples from the Tara Oceans Expedition (2009-2013), about depth specific features [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.853810
Project(s):
Fondation Tara Expeditions (FondTara)
Tara Oceans Expedition (Tara_Oceans_2009-2013)
Coverage:
Median Latitude: 13.998831 * Median Longitude: -38.196532 * South-bound Latitude: -64.382200 * West-bound Longitude: -168.903100 * North-bound Latitude: 79.677700 * East-bound Longitude: 174.991700
Date/Time Start: 2009-09-05T00:00:00 * Date/Time End: 2013-12-06T09:30:00
Event(s):
TARA_2009-2013_EVENT_unknown * Date/Time Start: 2009-09-05T00:00:00 * Date/Time End: 2013-12-06T00:00:00 * Comment: This event is used to describe a few samples for which the sampling event is unknown
TARA_20090907T1530Z_001_EVENT_NET ([day] [water layer with no specific feature]) * Latitude: 44.401300 * Longitude: -9.827300 * Date/Time: 2009-09-07T15:30:00 * Campaign: TARA_20090905Z (Lorient to Lisbon, Stations: TARA_001-002) * Basis: SV Tara * Method/Device: Plankton net, type=Bongo, mesh(µm)=300, mouth(m^2)=0.258319, length(m)=3 ([NET-BONGO-300])
TARA_20090907T1610Z_001_EVENT_NET ([day] [surface water layer (ENVO:00002042)]) * Latitude: 44.401300 * Longitude: -9.827300 * Date/Time: 2009-09-07T16:10:00 * Campaign: TARA_20090905Z (Lorient to Lisbon, Stations: TARA_001-002) * Basis: SV Tara * Method/Device: Plankton net+sieve, type=Double, mesh(µm)=20, mouth(m^2)=0.192442, length(m)=2.5 ([NET-DOUBLE-20]+[SIEVE-180])
Parameter(s):
# | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
---|---|---|---|---|---|---|
1 | Sample ID | Sample ID | Pesant, Stephane | registered at PANGAEA, Data Publisher for Earth and Environmental Science | TARA_barcode# | |
2 | Sample ID | Sample ID | Pesant, Stephane | registered at the BioSamples database | BioSamples accession number (SAMEA#) | |
3 | Sample ID | Sample ID | Pesant, Stephane | registered at the European Nucleotides Archive (ENA) | ENA sample accession number (ERS#) | |
4 | Basis of event | Basis | Pesant, Stephane | |||
5 | Campaign of event | Campaign | Pesant, Stephane | |||
6 | Station label | Station | Pesant, Stephane | registered at PANGAEA, Data Publisher for Earth and Environmental Science | TARA_event-datetime_station#_event-type | |
7 | Method/Device of event | Method/Device | Pesant, Stephane | |||
8 | Event label | Event | Pesant, Stephane | |||
9 | Date/Time of event | Date/Time | Pesant, Stephane | |||
10 | Latitude of event | Latitude | Pesant, Stephane | |||
11 | Longitude of event | Longitude | Pesant, Stephane | |||
12 | Environmental feature | Env feature | Pesant, Stephane | terms registered at EnvO, the Environmental Ontology | [abbreviation], full name (ENVO:ID) from which this sample was collected | |
13 | Depth, nominal | Depth nominal | Pesant, Stephane | from which this sample was collected | ||
14 | Depth, top/min | Depth top | m | Pesant, Stephane | from which this sample was collected | |
15 | Depth, bottom/max | Depth bot | m | Pesant, Stephane | from which this sample was collected | |
16 | Size fraction, lower threshold | Fraction lower | µm | Pesant, Stephane | described in Pesant et al. (2017) | used on board to prepare samples |
17 | Size fraction, upper threshold | Fraction upper | µm | Pesant, Stephane | described in Pesant et al. (2017) | used on board to prepare samples |
18 | Sample material | Samp mat | Pesant, Stephane | TARA_station#_environmental-feature_size-fraction | ||
19 | Sample method | Sample method | Pesant, Stephane | described in Pesant et al. (2017) | short label describing the target analysis (BGC=biogeochemistry, IMG=imaging, SEQ=sequencing) and specifics of the methodology and sampling device (N=net, W=pump/bottles/bucket, CW=concentrated by tangential filtration) | |
20 | Sample code/label | Sample label | Pesant, Stephane | TARA_event-datetime_station#_event-type_environmental-feature_(depth)_protocol-label_size-fraction_sample-barcode | ||
21 | Distance | Distance | km | Guidi, Lionel | interval between the location at which the sample was collected and that of the closest environmental context information | |
22 | Duration | Duration | Guidi, Lionel | ISO 8601 | interval between the date/time at which the sample was collected and that of the closest environmental context information | |
23 | File name | File name | Guidi, Lionel | of sensor profiles that meet the criteria: distance lag <100 km and date/time lag <2 days | ||
24 | Number of observations | NOBS | # | Guidi, Lionel | that meet the criteria: 10 m around the environmental feature nominal depth, distance lag <100 km and date/time lag <2 days | |
25 | Temperature, water | Temp | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
26 | Temperature, water | Temp | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
27 | Temperature, water | Temp | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
28 | Temperature, water | Temp | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
29 | Temperature, water | Temp | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
30 | Conductivity | Cond | mS/cm | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
31 | Conductivity | Cond | mS/cm | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
32 | Conductivity | Cond | mS/cm | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
33 | Conductivity | Cond | mS/cm | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
34 | Conductivity | Cond | mS/cm | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
35 | Salinity | Sal | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location | |
36 | Salinity | Sal | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location | |
37 | Salinity | Sal | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location | |
38 | Salinity | Sal | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location | |
39 | Salinity | Sal | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location | |
40 | Temperature, water, potential | Tpot | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
41 | Temperature, water, potential | Tpot | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
42 | Temperature, water, potential | Tpot | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
43 | Temperature, water, potential | Tpot | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
44 | Temperature, water, potential | Tpot | °C | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
45 | Density, sigma-theta (0) | Sigma-theta | kg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
46 | Density, sigma-theta (0) | Sigma-theta | kg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
47 | Density, sigma-theta (0) | Sigma-theta | kg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
48 | Density, sigma-theta (0) | Sigma-theta | kg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
49 | Density, sigma-theta (0) | Sigma-theta | kg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
50 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
51 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
52 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
53 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
54 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
55 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using WOA09 climatology | minimum value in the selected environmental feature around the sampling date and location |
56 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using WOA09 climatology | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
57 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using WOA09 climatology | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
58 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using WOA09 climatology | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
59 | Oxygen | O2 | µmol/kg | Guidi, Lionel | calculated from in situ sensor data, calibrated using WOA09 climatology | maximum value in the selected environmental feature around the sampling date and location |
60 | Nitrate | [NO3]- | µmol/l | Guidi, Lionel | calculated from in situ sensor data, calibrated using water samples | minimum value in the selected environmental feature around the sampling date and location |
61 | Nitrate | [NO3]- | µmol/l | Guidi, Lionel | calculated from in situ sensor data, calibrated using water samples | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
62 | Nitrate | [NO3]- | µmol/l | Guidi, Lionel | calculated from in situ sensor data, calibrated using water samples | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
63 | Nitrate | [NO3]- | µmol/l | Guidi, Lionel | calculated from in situ sensor data, calibrated using water samples | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
64 | Nitrate | [NO3]- | µmol/l | Guidi, Lionel | calculated from in situ sensor data, calibrated using water samples | maximum value in the selected environmental feature around the sampling date and location |
65 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
66 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
67 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
68 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
69 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
70 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ corrected | minimum value in the selected environmental feature around the sampling date and location |
71 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ corrected | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
72 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ corrected | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
73 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ corrected | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
74 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ corrected | maximum value in the selected environmental feature around the sampling date and location |
75 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ cor. and calibrated using water samples | minimum value in the selected environmental feature around the sampling date and location, fluorescence was corrected for Non-Photochemical Quenching (NPQ) |
76 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ cor. and calibrated using water samples | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location, fluorescence was corrected for Non-Photochemical Quenching (NPQ) |
77 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ cor. and calibrated using water samples | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, fluorescence was corrected for Non-Photochemical Quenching (NPQ) |
78 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ cor. and calibrated using water samples | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location, , fluorescence was corrected for Non-Photochemical Quenching (NPQ) |
79 | Chlorophyll a | Chl a | mg/m3 | Guidi, Lionel | calculated from in situ sensor data, NPQ cor. and calibrated using water samples | maximum value in the selected environmental feature around the sampling date and location, fluorescence was corrected for Non-Photochemical Quenching (NPQ) |
80 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
81 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
82 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
83 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
84 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
85 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, in situ measurements in dark | minimum value in the selected environmental feature around the sampling date and location |
86 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, in situ measurements in dark | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
87 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, in situ measurements in dark | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
88 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, in situ measurements in dark | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
89 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, in situ measurements in dark | maximum value in the selected environmental feature around the sampling date and location |
90 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | minimum value in the selected environmental feature around the sampling date and location |
91 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
92 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
93 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
94 | Angular scattering coefficient, 470 nm | beta470 | m/sr | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | maximum value in the selected environmental feature around the sampling date and location |
95 | Optical backscattering coefficient, 470 nm | bb470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | minimum value in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
96 | Optical backscattering coefficient, 470 nm | bb470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
97 | Optical backscattering coefficient, 470 nm | bb470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
98 | Optical backscattering coefficient, 470 nm | bb470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
99 | Optical backscattering coefficient, 470 nm | bb470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | maximum value in the selected environmental feature around the sampling date and location, includes backscattering by particulate and dissolved matter and water molecules |
100 | Backscattering coefficient of particles, 470 nm | bbp470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | minimum value in the selected environmental feature around the sampling date and location |
101 | Backscattering coefficient of particles, 470 nm | bbp470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
102 | Backscattering coefficient of particles, 470 nm | bbp470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
103 | Backscattering coefficient of particles, 470 nm | bbp470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
104 | Backscattering coefficient of particles, 470 nm | bbp470 | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected with in situ measurements in dark | maximum value in the selected environmental feature around the sampling date and location |
105 | Fluorescence, colored dissolved organic matter | fCDOM | ppb (QSE) | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location, expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid) |
106 | Fluorescence, colored dissolved organic matter | fCDOM | ppb (QSE) | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location, expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid) |
107 | Fluorescence, colored dissolved organic matter | fCDOM | ppb (QSE) | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid) |
108 | Fluorescence, colored dissolved organic matter | fCDOM | ppb (QSE) | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location, expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid) |
109 | Fluorescence, colored dissolved organic matter | fCDOM | ppb (QSE) | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location, expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid) |
110 | Optical beam attenuation coefficient, 660 nm | bac660 | 1/m | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location, includes attenuation by particulate and dissolved matter and water molecules |
111 | Optical beam attenuation coefficient, 660 nm | bac660 | 1/m | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location, includes attenuation by particulate and dissolved matter and water molecules |
112 | Optical beam attenuation coefficient, 660 nm | bac660 | 1/m | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, includes attenuation by particulate and dissolved matter and water molecules |
113 | Optical beam attenuation coefficient, 660 nm | bac660 | 1/m | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location, includes attenuation by particulate and dissolved matter and water molecules |
114 | Optical beam attenuation coefficient, 660 nm | bac660 | 1/m | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location, includes attenuation by particulate and dissolved matter and water molecules |
115 | Beam attenuation coefficient of particles | bacp | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected for temperature drift | minimum value in the selected environmental feature around the sampling date and location, corrected for temperature drift of the sensor, using c(660) value at depth (assumed to be close to the attenuation coefficient of pure seawater) |
116 | Beam attenuation coefficient of particles | bacp | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected for temperature drift | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location, corrected for temperature drift of the sensor, using c(660) value at depth (assumed similar to pure seawater) |
117 | Beam attenuation coefficient of particles | bacp | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected for temperature drift | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, corrected for temperature drift of the sensor, using c(660) value at depth (assumed similar to pure seawater) |
118 | Beam attenuation coefficient of particles | bacp | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected for temperature drift | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location, corrected for temperature drift of the sensor, using c(660) value at depth (assumed similar to pure seawater) |
119 | Beam attenuation coefficient of particles | bacp | 1/m | Guidi, Lionel | Calculated from in situ sensor data, corrected for temperature drift | maximum value in the selected environmental feature around the sampling date and location, corrected for temperature drift of the sensor, using c(660) value at depth (assumed to be close to the attenuation coefficient of pure seawater) |
120 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
121 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
122 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
123 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
124 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
125 | Radiation, photosynthetically active | PAR | % | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | minimum value in the selected environmental feature around the sampling date and location |
126 | Radiation, photosynthetically active | PAR | % | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | lower quartile value (25th percentile, first quartile, Q1) in the selected environmental feature around the sampling date and location |
127 | Radiation, photosynthetically active | PAR | % | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
128 | Radiation, photosynthetically active | PAR | % | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | upper quartile value (75th percentile, third quartile, Q3) in the selected environmental feature around the sampling date and location |
129 | Radiation, photosynthetically active | PAR | % | Guidi, Lionel | calculated from in situ sensor data, calibrated using factory settings | maximum value in the selected environmental feature around the sampling date and location |
130 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 1-day avg. daily surface PAR (AMODIS) | minimum value in the selected environmental feature around the sampling date and location |
131 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 1-day avg. daily surface PAR (AMODIS) | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
132 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 1-day avg. daily surface PAR (AMODIS) | maximum value in the selected environmental feature around the sampling date and location |
133 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 1-day avg. daily surface PAR (AMODIS) | minimum value in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
134 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 1-day avg. daily surface PAR (AMODIS) | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
135 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 1-day avg. daily surface PAR (AMODIS) | maximum value in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
136 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 8-day avg. daily surface PAR (AMODIS) | minimum value in the selected environmental feature around the sampling date and location |
137 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 8-day avg. daily surface PAR (AMODIS) | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
138 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 8-day avg. daily surface PAR (AMODIS) | maximum value in the selected environmental feature around the sampling date and location |
139 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 8-day avg. daily surface PAR (AMODIS) | minimum value in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
140 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 8-day avg. daily surface PAR (AMODIS) | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
141 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 8-day avg. daily surface PAR (AMODIS) | maximum value in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
142 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 30-day avg. daily surface PAR (AMODIS) | minimum value in the selected environmental feature around the sampling date and location |
143 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 30-day avg. daily surface PAR (AMODIS) | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location |
144 | Radiation, photosynthetically active | PAR | mol quanta/m2/day | Pesant, Stephane | calculated from Kd(PAR)1 and 30-day avg. daily surface PAR (AMODIS) | maximum value in the selected environmental feature around the sampling date and location |
145 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 30-day avg. daily surface PAR (AMODIS) | minimum value in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
146 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 30-day avg. daily surface PAR (AMODIS) | median value (50th percentile, second quartile, Q2) in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
147 | Radiation, photosynthetically active | PAR | % | Pesant, Stephane | calculated from Kd(PAR)1 and 30-day avg. daily surface PAR (AMODIS) | maximum value in the selected environmental feature around the sampling date and location, expressed as % of surface PAR |
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