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Goldman, Johanna A L; Bender, Michael L; Morel, Francois M M (2017): The effects of pH and pCO2 on photosynthesis and respiration in the diatom Thalassiosira weissflogii [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.875066, Supplement to: Goldman, JAL et al. (2017): The effects of pH and pCO2 on photosynthesis and respiration in the diatom Thalassiosira weissflogii. Photosynthesis Research, 132(1), 83-93, https://doi.org/10.1007/s11120-016-0330-2

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Abstract:
The response of marine phytoplankton to the ongoing increase in atmospheric pCO2 reflects the consequences of both increased CO2 concentration and decreased pH in surface seawater. In the model diatom Thalassiosira weissflogii, we explored the effects of varying pCO2 and pH, independently and in concert, on photosynthesis and respiration by incubating samples in water enriched in H218O. In long-term experiments (6-h) at saturating light intensity, we observed no effects of pH or pCO2 on growth rate, photosynthesis or respiration. This absence of a measurable response reflects the very small change in energy used by the carbon concentrating mechanism (CCM) compared to the energy used in carbon fixation. In short-term experiments (3 min), we also observed no effects of pCO2 or pH, even under limiting light intensity. We surmise that in T. weissflogii, it is the photosynthetic production of NADPH and ATP, rather than the CO2-saturation of Rubisco that controls the rate of photosynthesis at low irradiance. In short-term experiments, we observed a slightly higher respiration rate at low pH at the onset of the dark period, possibly reflecting the energy used for exporting H+ and maintaining pH homeostasis. Based on what is known of the biochemistry of marine phytoplankton, our results are likely generalizable to other diatoms and a number of other eukaryotic species. The direct effects of ocean acidification on growth, photosynthesis and respiration in these organisms should be small over the range of atmospheric pCO2 predicted for the twenty-first century.
Keyword(s):
Bottles or small containers/Aquaria (<20 L); Chromista; Laboratory experiment; Laboratory strains; Light; Not applicable; Ochrophyta; Pelagos; Phytoplankton; Primary production/Photosynthesis; Respiration; Single species; Thalassiosira weissflogii
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-05-12.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeGoldman, Johanna A Lstudy
2SpeciesSpeciesGoldman, Johanna A L
3Registration number of speciesReg spec noGoldman, Johanna A L
4Uniform resource locator/link to referenceURL refGoldman, Johanna A LWoRMS Aphia ID
5Experiment durationExp durationdaysGoldman, Johanna A L
6ExperimentExpGoldman, Johanna A L
7Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetppmvGoldman, Johanna A L
8pHpHGoldman, Johanna A Ltotal scale
9Gross photosynthesis rate, oxygen, per chlorophyll aPG O2/Chl aµmol/µg/dayGoldman, Johanna A L
10Gross photosynthesis rate, standard deviationPG std dev±Goldman, Johanna A L
11Net photosynthesis rate, oxygen, per chlorophyll aPN O2/Chl aµmol/µg/dayGoldman, Johanna A L
12Net photosynthesis rate, standard deviationPN std dev±Goldman, Johanna A L
13Time in daysTimedaysGoldman, Johanna A L
14Cell densityCells#/mlGoldman, Johanna A L
15Respiration rate, oxygen, per chlorophyll aResp O2/Chl aµmol/µg/dayGoldman, Johanna A L
16Time in daysTimedaysGoldman, Johanna A L
17Cell densityCells#/mlGoldman, Johanna A L
18ReplicateReplGoldman, Johanna A L
19IrradianceEµmol/m2/sGoldman, Johanna A L
20Gross photosynthesis rate, oxygen, per chlorophyll aPG O2/Chl aµmol/µg/dayGoldman, Johanna A L
21ErrorErrorGoldman, Johanna A Ltechnical error of gross photosynthesis normalized to Chla
22Net photosynthesis rate, oxygen, per chlorophyll aPN O2/Chl aµmol/µg/dayGoldman, Johanna A L
23ErrorErrorGoldman, Johanna A Ltechnical error of net photosynthesis normalized to Chla
24Gross photosynthesis rate, oxygen, per cellPG O2/cellpmol/#/dayGoldman, Johanna A L
25ErrorErrorGoldman, Johanna A Ltechnical error of gross photosynthesis normalized to cell numbers
26Net photosynthesis rate, oxygen, per cellPN O2/cellpmol/#/dayGoldman, Johanna A L
27ErrorErrorGoldman, Johanna A Ltechnical error of net photosynthesis normalized to cell numbers
28Temperature, waterTemp°CGoldman, Johanna A L
29SalinitySalGoldman, Johanna A L
30Carbon, inorganic, dissolvedDICµmol/lGoldman, Johanna A L
31Alkalinity, totalATµmol/kgGoldman, Johanna A L
32Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3916 data points

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