Citation:

fmars.2017.00073

Name: Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Magnetic Island sulfate reduction
Creator: Artur Fink
Published: 2017-03-22
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Entire community; Laboratory experiment; Other metabolic rates; Soft-bottom community; Tropical

Always quote citation above when using data! You can download the citation in several formats below.

RIS Citation BibTeX Citation Text Citation Facebook Twitter

Keyword(s):

Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Entire community; Laboratory experiment; Other metabolic rates; Soft-bottom community; Tropical

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb

Project(s):

Biological Impacts of Ocean Acidification (BIOACID)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2017-03-22.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Depth, nominal	Depth nominal		Fink, Artur
2	Treatment	Treat		Fink, Artur
3	Sulfate reduction rate	SRR	nmol/m²/day	Fink, Artur
4	pH	pH		Fink, Artur		total scale
5	pH, standard error	pH std e	±	Fink, Artur		total scale
6	Alkalinity, total	AT	µmol/kg	Fink, Artur
7	Standard error	Std e	±	Fink, Artur
8	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Fink, Artur
9	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Fink, Artur
10	Carbon, inorganic, dissolved	DIC	µmol/l	Fink, Artur
11	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Fink, Artur
12	Calcite saturation state	Omega Cal		Fink, Artur
13	Standard error	Std e	±	Fink, Artur
14	Aragonite saturation state	Omega Arg		Fink, Artur
15	Standard error	Std e	±	Fink, Artur
16	High magnesium calcite saturation state	Omega HMC		Fink, Artur
17	Standard error	Std e	±	Fink, Artur
18	Temperature, water	Temp	°C	Fink, Artur
19	Standard error	Std e	±	Fink, Artur
20	Salinity	Sal		Fink, Artur
21	Standard error	Std e	±	Fink, Artur
22	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
23	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
24	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
25	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
26	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
27	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
28	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
29	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
30	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Size:

1080 data points

Download Data

Download dataset as tab-delimited text — use the following character encoding:

View dataset as HTML