Lucey, Noelle M; Lombardi, Chiara; Florio, Maurizio; DeMarchi, Lucia; Nannini, Matteo; Rundle, Simon; Gambi, Maria Cristina; Calosi, Piero (2016): An in situ assessment of local adaptation in a calcifying polychaete froma shallow CO2 vent system [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.869572
Always quote citation above when using data! You can download the citation in several formats below.
Keyword(s):
Related to:
Lucey, Noelle M; Lombardi, Chiara; Florio, Maurizio; DeMarchi, Lucia; Nannini, Matteo; Rundle, Simon; Gambi, Maria Cristina; Calosi, Piero (2016): An in situ assessment of local adaptation in a calcifying polychaete from a shallow CO2 vent system. Evolutionary Applications, 9(9), 1054-1071, https://doi.org/10.1111/eva.12400
Original version:
Lucey, Noelle M; Lombardi, Chiara; Florio, Maurizio; DeMarchi, Lucia; Nannini, Matteo; Rundle, Simon; Gambi, Maria Cristina; Calosi, Piero (2016): Fitness traits of a calcifying polychaete assessed after the reciprocal transplant experiment at a low-pH shallow CO2 vent system (June-July 2015) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.861354
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Project(s):
Coverage:
Latitude: 40.730600 * Longitude: 13.963400
Date/Time Start: 2015-06-17T00:00:00 * Date/Time End: 2015-07-06T00:00:00
Minimum Elevation: -2.0 m * Maximum Elevation: -2.0 m
Event(s):
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-12-16.
Parameter(s):
# | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
---|---|---|---|---|---|---|
1 | Species | Species | Lucey, Noelle M | |||
2 | Type | Type | Lucey, Noelle M | study | ||
3 | Treatment | Treat | Lucey, Noelle M | A = acidified, C = control; habitat origin and reciprical transplant location | ||
4 | Replicate | Repl | Lucey, Noelle M | deployed trap | ||
5 | Treatment | Treat | Lucey, Noelle M | the pH habitat that the experimental individual was collected from | ||
6 | Treatment | Treat | Lucey, Noelle M | the pH habitat that the experimental individual was transplanted into | ||
7 | Surface area | SA | cm2 | Lucey, Noelle M | the tube size of the recruits used in the experiment measured at the beginning of the transplant experiment | |
8 | Status | Status | Lucey, Noelle M | 1 indicates the individual survived during the experiment, 0 indicates mortality was observed | ||
9 | Status | Status | Lucey, Noelle M | 1 indicates the individual did reach maturation during the experiment, 0 indicates that the individual did not | ||
10 | Surface area | SA | cm2 | Lucey, Noelle M | total surface area of the individual at the end of the transplant period | |
11 | Surface area | SA | cm2 | Lucey, Noelle M | difference in tube growth between the beginning and end of the transplant | |
12 | Dissolution rate | Diss rate | % | Lucey, Noelle M | percent of the total tube surface area that dissolved | |
13 | Number | n | # | Lucey, Noelle M | F3 generation recruits, settled in the trap, from the initial F2 individual | |
14 | Surface area | SA | cm2 | Lucey, Noelle M | average size of the tube area for all the F3 recruits from each F2 parent individual | |
15 | Individuals | Ind | # | Lucey, Noelle M | at the end of the reciprocal transplant experiment, including all living initial F2-generation recruits, all living F3 recruits, and any eggs or embryos from each starting F2-generation individual | |
16 | Replicate | Repl | Lucey, Noelle M | stake | ||
17 | Identification | ID | Lucey, Noelle M | the slide number and where/what conditions the individuals were reared on, as followed from wild-caught parents during the entire grow-out period | ||
18 | pH | pH | Lucey, Noelle M | Potentiometric | habitat origin, NBS scale | |
19 | pH, standard deviation | pH std dev | ± | Lucey, Noelle M | Potentiometric | habitat origin, NBS scale |
20 | Temperature, water | Temp | °C | Lucey, Noelle M | habitat origin | |
21 | Temperature, water, standard deviation | Temp std dev | ± | Lucey, Noelle M | habitat origin | |
22 | Salinity | Sal | Lucey, Noelle M | habitat origin | ||
23 | Salinity, standard deviation | Sal std dev | ± | Lucey, Noelle M | habitat origin | |
24 | Alkalinity, total | AT | µmol/kg | Lucey, Noelle M | Potentiometric titration | habitat origin |
25 | Alkalinity, total, standard deviation | AT std dev | ± | Lucey, Noelle M | Potentiometric titration | habitat origin |
26 | Carbon dioxide | CO2 | µmol/kg | Lucey, Noelle M | Calculated using seacarb | habitat origin |
27 | Carbon dioxide, standard deviation | CO2 std dev | ± | Lucey, Noelle M | Calculated using seacarb | habitat origin |
28 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Lucey, Noelle M | Calculated using seacarb | habitat origin |
29 | Partial pressure of carbon dioxide, standard deviation | pCO2 std dev | ± | Lucey, Noelle M | Calculated using seacarb | habitat origin |
30 | Bicarbonate ion | [HCO3]- | µmol/kg | Lucey, Noelle M | Calculated using seacarb | habitat origin |
31 | Bicarbonate ion, standard deviation | [HCO3]- std dev | ± | Lucey, Noelle M | Calculated using seacarb | habitat origin |
32 | Carbonate ion | [CO3]2- | µmol/kg | Lucey, Noelle M | Calculated using seacarb | habitat origin |
33 | Carbonate ion, standard deviation | [CO3]2- std dev | ± | Lucey, Noelle M | Calculated using seacarb | habitat origin |
34 | Carbon, inorganic, dissolved | DIC | µmol/kg | Lucey, Noelle M | Calculated using seacarb | habitat origin |
35 | Carbon, inorganic, dissolved, standard deviation | DIC std dev | ± | Lucey, Noelle M | Calculated using seacarb | habitat origin |
36 | Calcite saturation state | Omega Cal | Lucey, Noelle M | Calculated using seacarb | habitat origin | |
37 | Calcite saturation state, standard deviation | Omega Cal std dev | ± | Lucey, Noelle M | Calculated using seacarb | habitat origin |
38 | Aragonite saturation state | Omega Arg | Lucey, Noelle M | Calculated using seacarb | habitat origin | |
39 | Aragonite saturation state, standard deviation | Omega Arg std dev | ± | Lucey, Noelle M | Calculated using seacarb | habitat origin |
40 | pH | pH | Lucey, Noelle M | Potentiometric | reciprical transplant location, NBS scale | |
41 | pH, standard deviation | pH std dev | ± | Lucey, Noelle M | Potentiometric | reciprical transplant location, NBS scale |
42 | Temperature, water | Temp | °C | Lucey, Noelle M | reciprical transplant location | |
43 | Temperature, water, standard deviation | Temp std dev | ± | Lucey, Noelle M | reciprical transplant location | |
44 | Salinity | Sal | Lucey, Noelle M | reciprical transplant location | ||
45 | Salinity, standard deviation | Sal std dev | ± | Lucey, Noelle M | reciprical transplant location | |
46 | Alkalinity, total | AT | µmol/kg | Lucey, Noelle M | Potentiometric titration | reciprical transplant location |
47 | Alkalinity, total, standard deviation | AT std dev | ± | Lucey, Noelle M | Potentiometric titration | reciprical transplant location |
48 | Carbon dioxide | CO2 | µmol/kg | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
49 | Carbon dioxide, standard deviation | CO2 std dev | ± | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
50 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
51 | Partial pressure of carbon dioxide, standard deviation | pCO2 std dev | ± | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
52 | Bicarbonate ion | [HCO3]- | µmol/kg | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
53 | Bicarbonate ion, standard deviation | [HCO3]- std dev | ± | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
54 | Carbonate ion | [CO3]2- | µmol/kg | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
55 | Carbonate ion, standard deviation | [CO3]2- std dev | ± | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
56 | Carbon, inorganic, dissolved | DIC | µmol/kg | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
57 | Carbon, inorganic, dissolved, standard deviation | DIC std dev | ± | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
58 | Calcite saturation state | Omega Cal | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location | |
59 | Calcite saturation state, standard deviation | Omega Cal std dev | ± | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
60 | Aragonite saturation state | Omega Arg | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location | |
61 | Aragonite saturation state, standard deviation | Omega Arg std dev | ± | Lucey, Noelle M | Calculated using seacarb | reciprical transplant location |
62 | Carbonate system computation flag | CSC flag | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | ||
63 | pH | pH | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin, total scale | |
64 | Carbon dioxide | CO2 | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin |
65 | Fugacity of carbon dioxide (water) at sea surface temperature (wet air) | fCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin |
66 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin |
67 | Bicarbonate ion | [HCO3]- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin |
68 | Carbonate ion | [CO3]2- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin |
69 | Carbon, inorganic, dissolved | DIC | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin |
70 | Aragonite saturation state | Omega Arg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin | |
71 | Calcite saturation state | Omega Cal | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | habitat origin | |
72 | pH | pH | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location, total scale | |
73 | Carbon dioxide | CO2 | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location |
74 | Fugacity of carbon dioxide (water) at sea surface temperature (wet air) | fCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location |
75 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location |
76 | Bicarbonate ion | [HCO3]- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location |
77 | Carbonate ion | [CO3]2- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location |
78 | Carbon, inorganic, dissolved | DIC | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location |
79 | Aragonite saturation state | Omega Arg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location | |
80 | Calcite saturation state | Omega Cal | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | reciprical transplant location |
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
6746 data points
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