Citation:

PANGAEA.861851

Name: Acidification, not carbonation, is the major regulator of carbon fluxes in the coccolithophore Emiliania huxleyi
Published: 2016-06-20
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Bottles or small containers/Aquaria (<20 L); Chromista; Emiliania huxleyi; Haptophyta; Laboratory experiment; Laboratory strains; Not applicable; Pelagos; Phytoplankton; Primary production/Photosynthesis; Respiration; Single species

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Keyword(s):

Bottles or small containers/Aquaria (<20 L); Chromista; Emiliania huxleyi; Haptophyta; Laboratory experiment; Laboratory strains; Not applicable; Pelagos; Phytoplankton; Primary production/Photosynthesis; Respiration; Single species

Related to:

Kottmeier, Dorothee; Rokitta, Sebastian D; Rost, Björn (2016): Acidification, not carbonation, is the major regulator of carbon fluxes in the coccolithophore Emiliania huxleyi. New Phytologist, 211(1), 126-137, https://doi.org/10.1111/nph.13885

Original version:

Kottmeier, Dorothee; Rokitta, Sebastian D; Rost, Björn (2016): Culture conditions, mass spectrometric measurements and acclimation carbonate chemistry. PANGAEA, https://doi.org/10.1594/PANGAEA.859864

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.8. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-06-15.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type	Type		Kottmeier, Dorothee		study
2	Species	Species		Kottmeier, Dorothee
3	Registration number of species	Reg spec no		Kottmeier, Dorothee
4	Uniform resource locator/link to reference	URL ref		Kottmeier, Dorothee		WoRMS Aphia ID
5	Treatment	Treat		Kottmeier, Dorothee		acclimation
6	Irradiance	E	µmol/m²/s	Kottmeier, Dorothee
7	Treatment	Treat		Kottmeier, Dorothee		carbonate chemsitry
8	Net photosynthesis rate	PN	µmol/mg/h	Kottmeier, Dorothee	Mass spectrometry
9	Net photosynthesis rate, standard deviation	PN std dev	±	Kottmeier, Dorothee	Mass spectrometry
10	Respiration rate, oxygen	Resp O2	µmol/mg/h	Kottmeier, Dorothee	Mass spectrometry
11	Respiration rate, oxygen, standard deviation	Resp O2 std dev	±	Kottmeier, Dorothee	Mass spectrometry
12	Carbon dioxide uptake rate	CO2 upt rate	µmol/mg/h	Kottmeier, Dorothee	Mass spectrometry
13	Carbon dioxide uptake, standard deviation	CO2 upt rate std dev	±	Kottmeier, Dorothee	Mass spectrometry
14	Bicarbonate uptake rate	[HCO3]- upt rate	µmol/mg/h	Kottmeier, Dorothee	Mass spectrometry
15	Bicarbonate uptake rate, standard deviation	[HCO3]- upt rate std dev	±	Kottmeier, Dorothee	Mass spectrometry
16	Carbon dioxide usage fraction	fCO2		Kottmeier, Dorothee	Mass spectrometry
17	Carbon dioxide usage fraction, standard deviation	fCO2 std dev	±	Kottmeier, Dorothee	Mass spectrometry
18	Carbon dioxide	CO2	µmol/kg	Kottmeier, Dorothee	Mass spectrometry
19	Carbon dioxide, standard deviation	CO2 std dev	±	Kottmeier, Dorothee	Mass spectrometry
20	Bicarbonate ion	[HCO3]-	µmol/kg	Kottmeier, Dorothee	Mass spectrometry
21	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Kottmeier, Dorothee	Mass spectrometry
22	Hydrogen ion concentration	H+	µmol/kg	Kottmeier, Dorothee	Mass spectrometry
23	Hydrogen ion concentration, standard deviation	H+ std dev	±	Kottmeier, Dorothee	Mass spectrometry
24	Salinity	Sal		Kottmeier, Dorothee
25	Pressure, water	Press	dbar	Kottmeier, Dorothee
26	Phosphate	PHSPHT	µmol/kg	Kottmeier, Dorothee
27	Silicate	SILCAT	µmol/kg	Kottmeier, Dorothee
28	Temperature, water	Temp	°C	Kottmeier, Dorothee
29	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
30	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale
31	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
32	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
33	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
34	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
35	Alkalinity, total	AT	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
36	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
37	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
38	Growth rate	µ	1/day	Kottmeier, Dorothee
39	Growth rate, standard deviation	µ std dev	±	Kottmeier, Dorothee
40	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
41	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
42	pH	pH		Kottmeier, Dorothee	Calculated using CO2SYS	NBS scale, acclimation
43	pH, standard deviation	pH std dev	±	Kottmeier, Dorothee	Calculated using CO2SYS	NBS scale, acclimation
44	Hydrogen ion concentration	H+	µmol/kg	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
45	Hydrogen ion concentration, standard deviation	H+ std dev	±	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
46	Alkalinity, total	AT	µmol/kg	Kottmeier, Dorothee	Potentiometric titration	acclimation
47	Alkalinity, total, standard deviation	AT std dev	±	Kottmeier, Dorothee	Potentiometric titration	acclimation
48	Carbon, inorganic, dissolved	DIC	µmol/kg	Kottmeier, Dorothee	Colorimetric	acclimation
49	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Kottmeier, Dorothee	Colorimetric	acclimation
50	Carbon dioxide	CO2	µmol/kg	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
51	Carbon dioxide, standard deviation	CO2 std dev	±	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
52	Bicarbonate ion	[HCO3]-	µmol/kg	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
53	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
54	Carbonate ion	[CO3]2-	µmol/kg	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation
55	Carbonate ion, standard deviation	[CO3]2- std dev	±	Kottmeier, Dorothee	Calculated using CO2SYS	acclimation

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

1710 data points

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